RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 ZNF883P0CG24 379 aa14.06□□□□□ -0.16
ITGA6-201ENST00000264107 MRPS12O15235 138 aaKnown RBP14.06□□□□□ -0.16
ITGA6-201ENST00000264107 ATP6V0E1O15342 81 aa14.06□□□□□ -0.16
ITGA6-201ENST00000264107 COX7CP15954 63 aa14.06□□□□□ -0.16
ITGA6-201ENST00000264107 MP68P56378 58 aa14.06□□□□□ -0.16
ITGA6-201ENST00000264107 DEFB131AP59861 70 aa14.06□□□□□ -0.16
ITGA6-201ENST00000264107 BUB3O43684 328 aa14.06□□□□□ -0.16
ITGA6-201ENST00000264107 CXCL5P42830 114 aa14.06□□□□□ -0.16
ITGA6-201ENST00000264107 IMUPQ9GZP8 106 aa14.06□□□□□ -0.16
ITGA6-201ENST00000264107 C20orf173Q96LM9 149 aa14.05□□□□□ -0.16
ITGA6-201ENST00000264107 IGKV2D-26A0A0A0MRZ7 120 aa14.05□□□□□ -0.16
ITGA6-201ENST00000264107 UFSP1Q6NVU6 142 aa14.05□□□□□ -0.16
ITGA6-201ENST00000264107 ODF3L1Q8IXM7 274 aa14.05□□□□□ -0.16
ITGA6-201ENST00000264107 DIAPH2-AS1Q14236 149 aa14.04□□□□□ -0.16
ITGA6-201ENST00000264107 SERP2Q8N6R1 65 aa14.04□□□□□ -0.16
ITGA6-201ENST00000264107 CENPVL3A0A0U1RRI6 287 aa14.04□□□□□ -0.16
ITGA6-201ENST00000264107 TIMM17AQ99595 171 aa14.04□□□□□ -0.16
ITGA6-201ENST00000264107 PROK2Q9HC23 129 aa14.04□□□□□ -0.16
ITGA6-201ENST00000264107 DAZ2Q13117 558 aaKnown RBP14.04□□□□□ -0.16
ITGA6-201ENST00000264107 DAZ4Q86SG3 579 aaKnown RBP14.04□□□□□ -0.16
ITGA6-201ENST00000264107 DAZ3Q9NR90 486 aaKnown RBP14.04□□□□□ -0.16
ITGA6-201ENST00000264107 PRR30Q53SZ7 412 aaPredicted RBP14.03□□□□□ -0.16
ITGA6-201ENST00000264107 LINC00311Q8N616 119 aa14.03□□□□□ -0.16
ITGA6-201ENST00000264107 MAPKAPK5-AS1Q8N8E1 139 aa14.03□□□□□ -0.16
ITGA6-201ENST00000264107 NREPQ16612 68 aa14.03□□□□□ -0.16
ITGA6-201ENST00000264107 OPRPNQ99935 248 aaPredicted RBP14.03□□□□□ -0.16
ITGA6-201ENST00000264107 ZNF503-AS2A6NEH8 195 aa14.03□□□□□ -0.16
ITGA6-201ENST00000264107 CLPSL1A2RUU4 121 aa14.02□□□□□ -0.16
ITGA6-201ENST00000264107 SHISA2Q6UWI4 295 aa14.02□□□□□ -0.16
ITGA6-201ENST00000264107 Q0VFX4 171 aa14.01□□□□□ -0.17
ITGA6-201ENST00000264107 NKAPP1Q8N9T2 125 aa14.01□□□□□ -0.17
ITGA6-201ENST00000264107 LENEPQ9Y5L5 61 aa14.01□□□□□ -0.17
ITGA6-201ENST00000264107 PRR19A6NJB7 356 aa14.01□□□□□ -0.17
ITGA6-201ENST00000264107 ZNF561-AS1K7EIQ3 104 aa14.01□□□□□ -0.17
ITGA6-201ENST00000264107 MRPL53Q96EL3 112 aaKnown RBP14.01□□□□□ -0.17
ITGA6-201ENST00000264107 CFHR3Q02985 330 aa14.01□□□□□ -0.17
ITGA6-201ENST00000264107 PIP4P2Q8N4L2 257 aa14.01□□□□□ -0.17
ITGA6-201ENST00000264107 IGKV1OR2-108A0A075B7D4 117 aa14□□□□□ -0.17
ITGA6-201ENST00000264107 G3V318 75 aa14□□□□□ -0.17
ITGA6-201ENST00000264107 RPL35AP18077 110 aaKnown RBP14□□□□□ -0.17
ITGA6-201ENST00000264107 Q6Q795 121 aa14□□□□□ -0.17
ITGA6-201ENST00000264107 IGHV4-28A0A0C4DH34 117 aa14□□□□□ -0.17
ITGA6-201ENST00000264107 FUSP35637 526 aaKnown RBP eCLIP14□□□□□ -0.17
ITGA6-201ENST00000264107 XCL2Q9UBD3 114 aa14□□□□□ -0.17
ITGA6-201ENST00000264107 DEFB130BP0DP73 79 aa14□□□□□ -0.17
ITGA6-201ENST00000264107 DEFB130AP0DP74 79 aa14□□□□□ -0.17
ITGA6-201ENST00000264107 CNOT1A5YKK6 2376 aaKnown RBP13.99□□□□□ -0.17
ITGA6-201ENST00000264107 CMC4P56277 68 aaPredicted RBP13.99□□□□□ -0.17
ITGA6-201ENST00000264107 P0DMU3 169 aa13.99□□□□□ -0.17
ITGA6-201ENST00000264107 FAM231AP0DMU4 169 aa13.99□□□□□ -0.17
ITGA6-201ENST00000264107 FAM231CP0DMU5 169 aa13.99□□□□□ -0.17
ITGA6-201ENST00000264107 COX7A2LO14548 114 aa13.99□□□□□ -0.17
ITGA6-201ENST00000264107 SIP14410 1827 aa13.99□□□□□ -0.17
ITGA6-201ENST00000264107 RPL18AQ02543 176 aaKnown RBP13.99□□□□□ -0.17
ITGA6-201ENST00000264107 LINC00322Q6ZN03 302 aaPredicted RBP13.99□□□□□ -0.17
ITGA6-201ENST00000264107 H3BUX3 64 aa13.99□□□□□ -0.17
ITGA6-201ENST00000264107 CADP27708 2225 aa13.99□□□□□ -0.17
ITGA6-201ENST00000264107 MIAQ16674 131 aa13.98□□□□□ -0.17
ITGA6-201ENST00000264107 EP300Q09472 2414 aaPredicted RBP13.98□□□□□ -0.17
ITGA6-201ENST00000264107 TIMM17BO60830 172 aa13.98□□□□□ -0.17
ITGA6-201ENST00000264107 FAM19A5Q7Z5A7 132 aaPredicted RBP13.98□□□□□ -0.17
ITGA6-201ENST00000264107 EML6Q6ZMW3 1958 aa13.98□□□□□ -0.17
ITGA6-201ENST00000264107 GATA4P43694 442 aa13.98□□□□□ -0.17
ITGA6-201ENST00000264107 C17orf82Q86X59 251 aaPredicted RBP13.98□□□□□ -0.17
ITGA6-201ENST00000264107 PLXND1Q9Y4D7 1925 aa13.98□□□□□ -0.17
ITGA6-201ENST00000264107 WI2-2373I1.2A0A1W2PRP0 233 aa13.97□□□□□ -0.17
ITGA6-201ENST00000264107 NDUFA4O00483 81 aa13.97□□□□□ -0.17
ITGA6-201ENST00000264107 DEFB105AQ8NG35 78 aa13.97□□□□□ -0.17
ITGA6-201ENST00000264107 FANCD2OSQ96PS1 177 aa13.97□□□□□ -0.17
ITGA6-201ENST00000264107 FGF23Q9GZV9 251 aaPredicted RBP13.97□□□□□ -0.17
ITGA6-201ENST00000264107 VPREB3Q9UKI3 123 aa13.97□□□□□ -0.17
ITGA6-201ENST00000264107 CSDC2Q9Y534 153 aaKnown RBP13.97□□□□□ -0.17
ITGA6-201ENST00000264107 MBD6Q96DN6 1003 aa13.97□□□□□ -0.17
ITGA6-201ENST00000264107 IGHV1-58A0A0C4DH39 117 aa13.96□□□□□ -0.17
ITGA6-201ENST00000264107 TRBV6-1A0A0K0K1D8 114 aa13.96□□□□□ -0.17
ITGA6-201ENST00000264107 TRIAP1O43715 76 aa13.96□□□□□ -0.17
ITGA6-201ENST00000264107 IGHV3-30-3P0DP02 117 aa13.96□□□□□ -0.17
ITGA6-201ENST00000264107 IGLV2-14P01704 120 aa13.96□□□□□ -0.17
ITGA6-201ENST00000264107 TMEM256-PLSCR3K7ERE1 68 aa13.96□□□□□ -0.17
ITGA6-201ENST00000264107 BRD3OSQ6XYD6 125 aa13.96□□□□□ -0.17
ITGA6-201ENST00000264107 NFE4Q86UQ8 179 aa13.96□□□□□ -0.17
ITGA6-201ENST00000264107 IGHV4-4A0A075B6R2 117 aa13.96□□□□□ -0.17
ITGA6-201ENST00000264107 Q8TCH9 128 aa13.96□□□□□ -0.17
ITGA6-201ENST00000264107 SPTBN2O15020 2390 aa13.96□□□□□ -0.18
ITGA6-201ENST00000264107 Q6ZS92 163 aa13.96□□□□□ -0.18
ITGA6-201ENST00000264107 A0A0J9YXY3 114 aa13.95□□□□□ -0.18
ITGA6-201ENST00000264107 ENHOQ6UWT2 76 aa13.95□□□□□ -0.18
ITGA6-201ENST00000264107 Q8N976 141 aa13.95□□□□□ -0.18
ITGA6-201ENST00000264107 USP17L23D6RBM5 183 aa13.95□□□□□ -0.18
ITGA6-201ENST00000264107 COL8A2P25067 703 aa13.95□□□□□ -0.18
ITGA6-201ENST00000264107 SAA4P35542 130 aa13.95□□□□□ -0.18
ITGA6-201ENST00000264107 C11orf44Q8N8P7 122 aa13.95□□□□□ -0.18
ITGA6-201ENST00000264107 IGKV1-17P01599 117 aa13.94□□□□□ -0.18
ITGA6-201ENST00000264107 ROS1P08922 2347 aa13.94□□□□□ -0.18
ITGA6-201ENST00000264107 LOXP28300 417 aaPredicted RBP13.94□□□□□ -0.18
ITGA6-201ENST00000264107 TMEM105Q8N8V8 129 aa13.94□□□□□ -0.18
ITGA6-201ENST00000264107 PLCE1Q9P212 2302 aa13.94□□□□□ -0.18
ITGA6-201ENST00000264107 A0A0J9YY99 117 aa13.94□□□□□ -0.18
ITGA6-201ENST00000264107 TRBV30A0A0K0K1B3 111 aa13.94□□□□□ -0.18
ITGA6-201ENST00000264107 ATP5EP2Q5VTU8 51 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms