RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 X6R8D5 127 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 TENM3Q9P273 2699 aa7.03□□□□□ -1.28
SNRNP40-201ENST00000263694 CXorf65A6NEN9 183 aa7.02□□□□□ -1.29
SNRNP40-201ENST00000263694 UBE2CO00762 179 aa7.02□□□□□ -1.29
SNRNP40-201ENST00000263694 DEFB4AO15263 64 aa7.02□□□□□ -1.29
SNRNP40-201ENST00000263694 S100PP25815 95 aa7.02□□□□□ -1.29
SNRNP40-201ENST00000263694 C11orf72Q8NBR9 251 aa7.02□□□□□ -1.29
SNRNP40-201ENST00000263694 OR11H2Q8NH07 326 aa7.02□□□□□ -1.29
SNRNP40-201ENST00000263694 OR10AG1Q8NH19 301 aa7.02□□□□□ -1.29
SNRNP40-201ENST00000263694 RNF183Q96D59 192 aa7.02□□□□□ -1.29
SNRNP40-201ENST00000263694 RCHY1Q96PM5 261 aa7.02□□□□□ -1.29
SNRNP40-201ENST00000263694 LINC00467Q9BRT7 94 aa7.02□□□□□ -1.29
SNRNP40-201ENST00000263694 GFRA4Q9GZZ7 299 aa7.02□□□□□ -1.29
SNRNP40-201ENST00000263694 TRGV11A0A075B6L2 103 aa7.01□□□□□ -1.29
SNRNP40-201ENST00000263694 EMP1P54849 157 aa7.01□□□□□ -1.29
SNRNP40-201ENST00000263694 FOXA3P55318 350 aaPredicted RBP7.01□□□□□ -1.29
SNRNP40-201ENST00000263694 DNLZQ5SXM8 178 aa7.01□□□□□ -1.29
SNRNP40-201ENST00000263694 KCNIP4Q6PIL6 250 aa7.01□□□□□ -1.29
SNRNP40-201ENST00000263694 Q6ZWC4 215 aa7.01□□□□□ -1.29
SNRNP40-201ENST00000263694 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.01□□□□□ -1.29
SNRNP40-201ENST00000263694 C9orf85Q96MD7 179 aa7.01□□□□□ -1.29
SNRNP40-201ENST00000263694 IMMP2LQ96T52 175 aa7.01□□□□□ -1.29
SNRNP40-201ENST00000263694 OVOL2Q9BRP0 275 aa7.01□□□□□ -1.29
SNRNP40-201ENST00000263694 SSBP4Q9BWG4 385 aaPredicted RBP7.01□□□□□ -1.29
SNRNP40-201ENST00000263694 PLAC8L1A1L4L8 177 aa7□□□□□ -1.29
SNRNP40-201ENST00000263694 FAM231BA6NCW3 169 aa7□□□□□ -1.29
SNRNP40-201ENST00000263694 COLCA2A8K830 154 aa7□□□□□ -1.29
SNRNP40-201ENST00000263694 M0R381 172 aa7□□□□□ -1.29
SNRNP40-201ENST00000263694 SNAI2O43623 268 aa7□□□□□ -1.29
SNRNP40-201ENST00000263694 NTF3P20783 257 aa7□□□□□ -1.29
SNRNP40-201ENST00000263694 CTRLP40313 264 aa7□□□□□ -1.29
SNRNP40-201ENST00000263694 DEFA6Q01524 100 aa7□□□□□ -1.29
SNRNP40-201ENST00000263694 RRN3P1Q2M238 152 aa7□□□□□ -1.29
SNRNP40-201ENST00000263694 RNASE8Q8TDE3 154 aaKnown RBP7□□□□□ -1.29
SNRNP40-201ENST00000263694 JPT2Q9H910 190 aa7□□□□□ -1.29
SNRNP40-201ENST00000263694 SCRT2Q9NQ03 307 aa7□□□□□ -1.29
SNRNP40-201ENST00000263694 PHLDA3Q9Y5J5 127 aa7□□□□□ -1.29
SNRNP40-201ENST00000263694 A0A1B0GUT8 65 aa6.99□□□□□ -1.29
SNRNP40-201ENST00000263694 OR5AL1P0C617 328 aa6.99□□□□□ -1.29
SNRNP40-201ENST00000263694 CAMPP49913 170 aa6.99□□□□□ -1.29
SNRNP40-201ENST00000263694 ZNF415Q09FC8 603 aa6.99□□□□□ -1.29
SNRNP40-201ENST00000263694 TMEM263Q8WUH6 116 aaKnown RBP6.99□□□□□ -1.29
SNRNP40-201ENST00000263694 BTF3L4Q96K17 158 aa6.99□□□□□ -1.29
SNRNP40-201ENST00000263694 IGHV4-28A0A0C4DH34 117 aa6.99□□□□□ -1.29
SNRNP40-201ENST00000263694 F2Z2F3 143 aa6.99□□□□□ -1.29
SNRNP40-201ENST00000263694 TWIST1Q15672 202 aa6.99□□□□□ -1.29
SNRNP40-201ENST00000263694 SPANXN1Q5VSR9 72 aa6.99□□□□□ -1.29
SNRNP40-201ENST00000263694 FAM210BQ96KR6 192 aa6.99□□□□□ -1.29
SNRNP40-201ENST00000263694 NOP10Q9NPE3 64 aaKnown RBP6.99□□□□□ -1.29
SNRNP40-201ENST00000263694 MRPL16Q9NX20 251 aaKnown RBP6.99□□□□□ -1.29
SNRNP40-201ENST00000263694 MEGF8Q7Z7M0 2845 aa6.99□□□□□ -1.29
SNRNP40-201ENST00000263694 NACAE9PAV3 2078 aa6.98□□□□□ -1.29
SNRNP40-201ENST00000263694 TRBV24-1A0A075B6N3 115 aa6.98□□□□□ -1.29
SNRNP40-201ENST00000263694 A0A1B0GXF2 115 aa6.98□□□□□ -1.29
SNRNP40-201ENST00000263694 MED14OSP0DP75 135 aa6.98□□□□□ -1.29
SNRNP40-201ENST00000263694 ZNF876PQ49A33 203 aa6.98□□□□□ -1.29
SNRNP40-201ENST00000263694 Q8NAQ8 132 aa6.98□□□□□ -1.29
SNRNP40-201ENST00000263694 IL17DQ8TAD2 202 aa6.98□□□□□ -1.29
SNRNP40-201ENST00000263694 C16orf74Q96GX8 76 aa6.98□□□□□ -1.29
SNRNP40-201ENST00000263694 SNURFLB1AK76 121 aa6.97□□□□□ -1.29
SNRNP40-201ENST00000263694 RAB4BP61018 213 aa6.97□□□□□ -1.29
SNRNP40-201ENST00000263694 RIGQ13278 110 aa6.97□□□□□ -1.29
SNRNP40-201ENST00000263694 ZNF493Q6ZR52 646 aa6.97□□□□□ -1.29
SNRNP40-201ENST00000263694 Q6ZTI0 123 aa6.97□□□□□ -1.29
SNRNP40-201ENST00000263694 BORCS7Q96B45 105 aa6.97□□□□□ -1.29
SNRNP40-201ENST00000263694 CNFNQ9BYD5 112 aa6.97□□□□□ -1.29
SNRNP40-201ENST00000263694 TRAV9-1A0A075B6T8 112 aa6.96□□□□□ -1.29
SNRNP40-201ENST00000263694 TRGV1A0A0A0MS02 117 aa6.96□□□□□ -1.29
SNRNP40-201ENST00000263694 SMIM9A6NGZ8 99 aa6.96□□□□□ -1.29
SNRNP40-201ENST00000263694 M0R2P5 195 aa6.96□□□□□ -1.29
SNRNP40-201ENST00000263694 EVI2AP22794 236 aa6.96□□□□□ -1.29
SNRNP40-201ENST00000263694 CACNG7P62955 275 aa6.96□□□□□ -1.29
SNRNP40-201ENST00000263694 HBBP68871 147 aa6.96□□□□□ -1.29
SNRNP40-201ENST00000263694 TM2D3Q9BRN9 247 aa6.96□□□□□ -1.29
SNRNP40-201ENST00000263694 SPXQ9BT56 116 aa6.96□□□□□ -1.29
SNRNP40-201ENST00000263694 SAMD10Q9BYL1 202 aa6.96□□□□□ -1.29
SNRNP40-201ENST00000263694 TP53TG1Q9Y2A0 90 aa6.96□□□□□ -1.29
SNRNP40-201ENST00000263694 IGHV4-4A0A075B6R2 117 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 A0A087WWL8 130 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 GAGE12BA1L429 117 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 GAGE7O76087 117 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 NXPH4O95158 308 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 GAGE12FP0CL80 117 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 GAGE12GP0CL81 117 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 GAGE12IP0CL82 117 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 MIFP14174 115 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 RAB5AP20339 215 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 RPS10P46783 165 aaKnown RBP6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 WDR73Q6P4I2 378 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 TMEM136Q6ZRR5 245 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 ZFP82Q8N141 532 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 C14orf178Q8N769 122 aaPredicted RBP6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 CELA1Q9UNI1 258 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 IGHV3-73A0A0B4J1V6 119 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 DEFB130BP0DP73 79 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 DEFB130AP0DP74 79 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 DAZ2Q13117 558 aaKnown RBP6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 FAM222AQ5U5X8 452 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 ATP5L2Q7Z4Y8 100 aa6.95□□□□□ -1.3
SNRNP40-201ENST00000263694 SYT8Q8NBV8 401 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms