RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 ATP5L2Q7Z4Y8 100 aa15.4■□□□□ 0.06
CCNE1-201ENST00000262643 IGKV3D-20A0A0C4DH25 116 aa15.39■□□□□ 0.05
CCNE1-201ENST00000262643 GRIFINA4D1Z8 144 aa15.39■□□□□ 0.05
CCNE1-201ENST00000262643 RNASE4P34096 147 aaKnown RBP15.39■□□□□ 0.05
CCNE1-201ENST00000262643 C11orf68Q9H3H3 251 aaKnown RBP15.39■□□□□ 0.05
CCNE1-201ENST00000262643 LYSTQ99698 3801 aa15.39■□□□□ 0.05
CCNE1-201ENST00000262643 A0A1B0GXF2 115 aa15.39■□□□□ 0.05
CCNE1-201ENST00000262643 XKRY2A2RUG3 117 aa15.39■□□□□ 0.05
CCNE1-201ENST00000262643 HLA-DQA1P01909 254 aa15.39■□□□□ 0.05
CCNE1-201ENST00000262643 Q8NAQ8 132 aa15.39■□□□□ 0.05
CCNE1-201ENST00000262643 X6R8D5 127 aa15.39■□□□□ 0.05
CCNE1-201ENST00000262643 PLECQ15149 4684 aaKnown RBP15.39■□□□□ 0.05
CCNE1-201ENST00000262643 IGHV4-28A0A0C4DH34 117 aa15.38■□□□□ 0.05
CCNE1-201ENST00000262643 CRISP2P16562 243 aa15.38■□□□□ 0.05
CCNE1-201ENST00000262643 LINC01559Q495D7 138 aa15.38■□□□□ 0.05
CCNE1-201ENST00000262643 ARMS2P0C7Q2 107 aa15.38■□□□□ 0.05
CCNE1-201ENST00000262643 HOXA5P20719 270 aa15.38■□□□□ 0.05
CCNE1-201ENST00000262643 SSTP61278 116 aa15.38■□□□□ 0.05
CCNE1-201ENST00000262643 LYZL1Q6UWQ5 148 aa15.38■□□□□ 0.05
CCNE1-201ENST00000262643 MUC21A0A0G2JKD1 596 aa15.37■□□□□ 0.05
CCNE1-201ENST00000262643 TRBV7-9A0A0J9YWB2 115 aa15.37■□□□□ 0.05
CCNE1-201ENST00000262643 MUC21A0A140T8X8 626 aa15.37■□□□□ 0.05
CCNE1-201ENST00000262643 AKR1D1P51857 326 aa15.37■□□□□ 0.05
CCNE1-201ENST00000262643 RPS20P60866 119 aaKnown RBP15.37■□□□□ 0.05
CCNE1-201ENST00000262643 HBBP68871 147 aa15.37■□□□□ 0.05
CCNE1-201ENST00000262643 MUC21Q5SSG8 566 aa15.37■□□□□ 0.05
CCNE1-201ENST00000262643 CLUHP3Q96NS8 147 aa15.37■□□□□ 0.05
CCNE1-201ENST00000262643 MIFP14174 115 aa15.36■□□□□ 0.05
CCNE1-201ENST00000262643 C11orf45Q8TAV5 145 aa15.36■□□□□ 0.05
CCNE1-201ENST00000262643 SSBP4Q9BWG4 385 aaPredicted RBP15.36■□□□□ 0.05
CCNE1-201ENST00000262643 IGHV3OR16-12A0A075B7B8 117 aa15.36■□□□□ 0.05
CCNE1-201ENST00000262643 A0A1B0GUT8 65 aa15.36■□□□□ 0.05
CCNE1-201ENST00000262643 RBMY1A1P0DJD3 496 aaKnown RBP15.36■□□□□ 0.05
CCNE1-201ENST00000262643 RBMY1CP0DJD4 496 aa15.36■□□□□ 0.05
CCNE1-201ENST00000262643 NANOS2P60321 138 aaKnown RBP15.36■□□□□ 0.05
CCNE1-201ENST00000262643 RBMY1FQ15415 496 aaKnown RBP15.36■□□□□ 0.05
CCNE1-201ENST00000262643 KIAA1644Q3SXP7 199 aa15.36■□□□□ 0.05
CCNE1-201ENST00000262643 GFI1BQ5VTD9 330 aa15.36■□□□□ 0.05
CCNE1-201ENST00000262643 Q6AWC8 147 aa15.36■□□□□ 0.05
CCNE1-201ENST00000262643 TRAV21A0A0B4J279 112 aa15.35■□□□□ 0.05
CCNE1-201ENST00000262643 KLLNB2CW77 178 aa15.35■□□□□ 0.05
CCNE1-201ENST00000262643 DUSP14O95147 198 aaKnown RBP15.34■□□□□ 0.05
CCNE1-201ENST00000262643 APCSP02743 223 aa15.34■□□□□ 0.05
CCNE1-201ENST00000262643 IGLC6P0CF74 106 aa15.34■□□□□ 0.05
CCNE1-201ENST00000262643 SLAQ13239 276 aa15.34■□□□□ 0.05
CCNE1-201ENST00000262643 FER1L6-AS1Q8NA97 138 aa15.34■□□□□ 0.05
CCNE1-201ENST00000262643 NAGKQ9UJ70 344 aa15.34■□□□□ 0.05
CCNE1-201ENST00000262643 M0R2Z0 102 aa15.34■□□□□ 0.05
CCNE1-201ENST00000262643 RYR2Q92736 4967 aa15.34■□□□□ 0.05
CCNE1-201ENST00000262643 PDZD11Q5EBL8 140 aa15.33■□□□□ 0.04
CCNE1-201ENST00000262643 AMTNQ6UX39 209 aa15.33■□□□□ 0.04
CCNE1-201ENST00000262643 NUPR2A6NF83 97 aa15.33■□□□□ 0.04
CCNE1-201ENST00000262643 ZNF705AQ6ZN79 300 aaPredicted RBP15.33■□□□□ 0.04
CCNE1-201ENST00000262643 TRAV12-2A0A075B6T6 113 aa15.32■□□□□ 0.04
CCNE1-201ENST00000262643 LCE6AA0A183 80 aa15.32■□□□□ 0.04
CCNE1-201ENST00000262643 A8MTW9 85 aa15.32■□□□□ 0.04
CCNE1-201ENST00000262643 RIGQ13278 110 aa15.32■□□□□ 0.04
CCNE1-201ENST00000262643 SPINK13Q1W4C9 94 aa15.32■□□□□ 0.04
CCNE1-201ENST00000262643 COA6Q5JTJ3 125 aaKnown RBP15.32■□□□□ 0.04
CCNE1-201ENST00000262643 HIST3H2BBQ8N257 126 aa15.32■□□□□ 0.04
CCNE1-201ENST00000262643 PHLDA1Q8WV24 401 aaPredicted RBP15.32■□□□□ 0.04
CCNE1-201ENST00000262643 BORCS7Q96B45 105 aa15.32■□□□□ 0.04
CCNE1-201ENST00000262643 ODF3Q96PU9 254 aa15.32■□□□□ 0.04
CCNE1-201ENST00000262643 LEPP41159 167 aa15.31■□□□□ 0.04
CCNE1-201ENST00000262643 CEMP1Q6PRD7 247 aaPredicted RBP15.31■□□□□ 0.04
CCNE1-201ENST00000262643 TRAV12-3A0A0B4J271 114 aa15.31■□□□□ 0.04
CCNE1-201ENST00000262643 ANXA2RQ3ZCQ2 193 aa15.31■□□□□ 0.04
CCNE1-201ENST00000262643 IFITM10A6NMD0 228 aa15.3■□□□□ 0.04
CCNE1-201ENST00000262643 CTRLP40313 264 aa15.3■□□□□ 0.04
CCNE1-201ENST00000262643 CDKN1BP46527 198 aa15.29■□□□□ 0.04
CCNE1-201ENST00000262643 GOLT1BQ9Y3E0 138 aa15.29■□□□□ 0.04
CCNE1-201ENST00000262643 C7orf71A4D174 169 aa15.29■□□□□ 0.04
CCNE1-201ENST00000262643 ZNF324O75467 553 aaPredicted RBP15.29■□□□□ 0.04
CCNE1-201ENST00000262643 NTF3P20783 257 aa15.29■□□□□ 0.04
CCNE1-201ENST00000262643 SRIP30626 198 aa15.29■□□□□ 0.04
CCNE1-201ENST00000262643 C1orf158Q8N1D5 194 aa15.29■□□□□ 0.04
CCNE1-201ENST00000262643 GNRH2O43555 120 aa15.28■□□□□ 0.04
CCNE1-201ENST00000262643 TMEM208Q9BTX3 173 aa15.28■□□□□ 0.04
CCNE1-201ENST00000262643 A0A1B0GW15 77 aa15.27■□□□□ 0.04
CCNE1-201ENST00000262643 S100A2P29034 98 aa15.27■□□□□ 0.04
CCNE1-201ENST00000262643 TSPOP30536 169 aa15.27■□□□□ 0.04
CCNE1-201ENST00000262643 EMP1P54849 157 aa15.27■□□□□ 0.04
CCNE1-201ENST00000262643 TWIST1Q15672 202 aa15.27■□□□□ 0.04
CCNE1-201ENST00000262643 MSRB1Q9NZV6 116 aa15.27■□□□□ 0.04
CCNE1-201ENST00000262643 KLK5Q9Y337 293 aaPredicted RBP15.27■□□□□ 0.04
CCNE1-201ENST00000262643 S100A8P05109 93 aa15.27■□□□□ 0.03
CCNE1-201ENST00000262643 CELA1Q9UNI1 258 aa15.27■□□□□ 0.03
CCNE1-201ENST00000262643 TIMM8BQ9Y5J9 83 aaPredicted RBP15.27■□□□□ 0.03
CCNE1-201ENST00000262643 F2Z2F3 143 aa15.26■□□□□ 0.03
CCNE1-201ENST00000262643 AMBPP02760 352 aa15.26■□□□□ 0.03
CCNE1-201ENST00000262643 TMEM256Q8N2U0 113 aa15.26■□□□□ 0.03
CCNE1-201ENST00000262643 SMIM9A6NGZ8 99 aa15.26■□□□□ 0.03
CCNE1-201ENST00000262643 CRXO43186 299 aaPredicted RBP15.26■□□□□ 0.03
CCNE1-201ENST00000262643 INSP01308 110 aa15.26■□□□□ 0.03
CCNE1-201ENST00000262643 TP53TG3Q9ULZ0 132 aa15.26■□□□□ 0.03
CCNE1-201ENST00000262643 DNAH1Q9P2D7 4330 aa15.26■□□□□ 0.03
CCNE1-201ENST00000262643 H3BVH4 76 aa15.25■□□□□ 0.03
CCNE1-201ENST00000262643 Q0VG73 95 aa15.25■□□□□ 0.03
CCNE1-201ENST00000262643 FAM159AQ6UWV7 190 aa15.25■□□□□ 0.03
CCNE1-201ENST00000262643 OR10AG1Q8NH19 301 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms