RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 RBM3P98179 157 aaKnown RBP9.47□□□□□ -0.89
SPG11-201ENST00000261866 OVOL2Q9BRP0 275 aa9.47□□□□□ -0.89
SPG11-201ENST00000261866 SHANK1Q9Y566 2161 aa9.47□□□□□ -0.89
SPG11-201ENST00000261866 C4orf48Q5BLP8 95 aa9.46□□□□□ -0.89
SPG11-201ENST00000261866 PLA2G5P39877 138 aa9.46□□□□□ -0.89
SPG11-201ENST00000261866 C1orf43Q9BWL3 253 aa9.46□□□□□ -0.89
SPG11-201ENST00000261866 DNAJC9-AS1A6NH13 148 aa9.46□□□□□ -0.89
SPG11-201ENST00000261866 UBE2AP49459 152 aa9.46□□□□□ -0.89
SPG11-201ENST00000261866 C8orf31Q8N9H6 132 aa9.46□□□□□ -0.89
SPG11-201ENST00000261866 DKK2Q9UBU2 259 aa9.46□□□□□ -0.89
SPG11-201ENST00000261866 Q8N7P7 452 aa9.46□□□□□ -0.9
SPG11-201ENST00000261866 A0A096LNI7 61 aa9.46□□□□□ -0.9
SPG11-201ENST00000261866 CRYBA4P53673 196 aa9.46□□□□□ -0.9
SPG11-201ENST00000261866 ETDCA0A1B0GVM5 59 aa9.46□□□□□ -0.9
SPG11-201ENST00000261866 CCL18P55774 89 aa9.45□□□□□ -0.9
SPG11-201ENST00000261866 AMTNQ6UX39 209 aa9.45□□□□□ -0.9
SPG11-201ENST00000261866 SMIM27A0A1W2PRY6 76 aa9.45□□□□□ -0.9
SPG11-201ENST00000261866 PYY3Q5JQD4 70 aa9.45□□□□□ -0.9
SPG11-201ENST00000261866 DEFB125Q8N687 156 aa9.45□□□□□ -0.9
SPG11-201ENST00000261866 Q8N9W7 124 aa9.45□□□□□ -0.9
SPG11-201ENST00000261866 DAND5Q8N907 189 aa9.45□□□□□ -0.9
SPG11-201ENST00000261866 NCOR1P1Q9H4R4 102 aa9.45□□□□□ -0.9
SPG11-201ENST00000261866 C2orf16Q68DN1 1984 aa9.45□□□□□ -0.9
SPG11-201ENST00000261866 A8MWP6 167 aa9.45□□□□□ -0.9
SPG11-201ENST00000261866 NDUFS6O75380 124 aaKnown RBP9.45□□□□□ -0.9
SPG11-201ENST00000261866 ZNF664Q8N3J9 261 aa9.45□□□□□ -0.9
SPG11-201ENST00000261866 ICOSQ9Y6W8 199 aa9.45□□□□□ -0.9
SPG11-201ENST00000261866 CARD19Q96LW7 228 aa9.45□□□□□ -0.9
SPG11-201ENST00000261866 SPART-AS1P0CW21 52 aa9.44□□□□□ -0.9
SPG11-201ENST00000261866 PRAC2D3DTV9 90 aa9.44□□□□□ -0.9
SPG11-201ENST00000261866 H3BUA1 57 aa9.44□□□□□ -0.9
SPG11-201ENST00000261866 IGLV3-1P01715 115 aa9.44□□□□□ -0.9
SPG11-201ENST00000261866 TM2D2Q9BX73 214 aa9.44□□□□□ -0.9
SPG11-201ENST00000261866 LINC01559Q495D7 138 aa9.44□□□□□ -0.9
SPG11-201ENST00000261866 GTSF1Q8WW33 167 aa9.44□□□□□ -0.9
SPG11-201ENST00000261866 C9orf47Q6ZRZ4 202 aa9.44□□□□□ -0.9
SPG11-201ENST00000261866 COX7B2Q8TF08 81 aa9.44□□□□□ -0.9
SPG11-201ENST00000261866 INAFM2P0DMQ5 153 aa9.43□□□□□ -0.9
SPG11-201ENST00000261866 MSMPQ1L6U9 139 aa9.43□□□□□ -0.9
SPG11-201ENST00000261866 PRORYQ9H606 182 aa9.43□□□□□ -0.9
SPG11-201ENST00000261866 POLR3KQ9Y2Y1 108 aaPredicted RBP9.43□□□□□ -0.9
SPG11-201ENST00000261866 TRAV4A0A0B4J268 109 aa9.43□□□□□ -0.9
SPG11-201ENST00000261866 C2orf70A6NJV1 201 aa9.43□□□□□ -0.9
SPG11-201ENST00000261866 LTAP01374 205 aa9.43□□□□□ -0.9
SPG11-201ENST00000261866 SVIPQ8NHG7 77 aa9.43□□□□□ -0.9
SPG11-201ENST00000261866 FANCD2OSQ96PS1 177 aa9.43□□□□□ -0.9
SPG11-201ENST00000261866 CAMK2N2Q96S95 79 aa9.43□□□□□ -0.9
SPG11-201ENST00000261866 I3L2K1 104 aa9.43□□□□□ -0.9
SPG11-201ENST00000261866 K7EQD1 137 aa9.43□□□□□ -0.9
SPG11-201ENST00000261866 FAM110AQ9BQ89 295 aa9.43□□□□□ -0.9
SPG11-201ENST00000261866 MSRB1Q9NZV6 116 aa9.43□□□□□ -0.9
SPG11-201ENST00000261866 K7EIM0 57 aa9.43□□□□□ -0.9
SPG11-201ENST00000261866 ZNF124Q15973 351 aa9.43□□□□□ -0.9
SPG11-201ENST00000261866 C16orf74Q96GX8 76 aa9.43□□□□□ -0.9
SPG11-201ENST00000261866 MED13Q9UHV7 2174 aa9.42□□□□□ -0.9
SPG11-201ENST00000261866 E7EUB6 86 aa9.42□□□□□ -0.9
SPG11-201ENST00000261866 ATP5G1P05496 136 aa9.42□□□□□ -0.9
SPG11-201ENST00000261866 ATP6V0E2Q8NHE4 81 aa9.42□□□□□ -0.9
SPG11-201ENST00000261866 CTSGP08311 255 aa9.42□□□□□ -0.9
SPG11-201ENST00000261866 HERVK_113P63121 156 aa9.42□□□□□ -0.9
SPG11-201ENST00000261866 Q9H8V8 135 aa9.42□□□□□ -0.9
SPG11-201ENST00000261866 H3BMG7 143 aa9.42□□□□□ -0.9
SPG11-201ENST00000261866 RNF138Q8WVD3 245 aa9.42□□□□□ -0.9
SPG11-201ENST00000261866 PYGO2Q9BRQ0 406 aa9.42□□□□□ -0.9
SPG11-201ENST00000261866 LINC01548A6NM66 108 aa9.41□□□□□ -0.9
SPG11-201ENST00000261866 IGKV3D-7A0A0C4DH55 119 aa9.41□□□□□ -0.9
SPG11-201ENST00000261866 UNQ9165/PRO28630Q6UXU0 137 aa9.41□□□□□ -0.9
SPG11-201ENST00000261866 IGKV2-24A0A0C4DH68 120 aa9.41□□□□□ -0.9
SPG11-201ENST00000261866 Q8N1Y9 231 aa9.41□□□□□ -0.9
SPG11-201ENST00000261866 SMAD5-AS1Q9Y6J3 95 aa9.41□□□□□ -0.9
SPG11-201ENST00000261866 TRBV20-1A0A075B6N2 111 aa9.41□□□□□ -0.9
SPG11-201ENST00000261866 H0Y9J4 135 aa9.4□□□□□ -0.9
SPG11-201ENST00000261866 HHLA3Q9XRX5 114 aa9.4□□□□□ -0.9
SPG11-201ENST00000261866 IGLV11-55A0A075B6I3 123 aa9.4□□□□□ -0.9
SPG11-201ENST00000261866 IGF2-ASQ6U949 168 aa9.4□□□□□ -0.9
SPG11-201ENST00000261866 TMEM190Q8WZ59 177 aa9.4□□□□□ -0.9
SPG11-201ENST00000261866 Q6ZWC4 215 aa9.4□□□□□ -0.9
SPG11-201ENST00000261866 CFPP27918 469 aa9.4□□□□□ -0.9
SPG11-201ENST00000261866 PRR20EP86478 221 aa9.4□□□□□ -0.9
SPG11-201ENST00000261866 PRR20CP86479 221 aa9.4□□□□□ -0.9
SPG11-201ENST00000261866 PRR20DP86480 221 aa9.4□□□□□ -0.9
SPG11-201ENST00000261866 PRR20BP86481 221 aa9.4□□□□□ -0.9
SPG11-201ENST00000261866 PRR20AP86496 221 aa9.4□□□□□ -0.9
SPG11-201ENST00000261866 J3QQQ9 107 aa9.39□□□□□ -0.91
SPG11-201ENST00000261866 DAZAP2Q15038 168 aaPredicted RBP9.39□□□□□ -0.91
SPG11-201ENST00000261866 ZNF843Q8N446 348 aa9.39□□□□□ -0.91
SPG11-201ENST00000261866 C4orf3Q8WVX3 66 aa9.39□□□□□ -0.91
SPG11-201ENST00000261866 MRPL23Q16540 153 aaKnown RBP9.39□□□□□ -0.91
SPG11-201ENST00000261866 C22orf34Q6ZV56 151 aa9.39□□□□□ -0.91
SPG11-201ENST00000261866 CT83Q5H943 113 aa9.38□□□□□ -0.91
SPG11-201ENST00000261866 Q0VG73 95 aa9.38□□□□□ -0.91
SPG11-201ENST00000261866 IFITM1P13164 125 aa9.38□□□□□ -0.91
SPG11-201ENST00000261866 IGHG2P01859 326 aa9.38□□□□□ -0.91
SPG11-201ENST00000261866 UBE2V1Q13404 147 aa9.38□□□□□ -0.91
SPG11-201ENST00000261866 ETDBQ3ZM63 59 aa9.38□□□□□ -0.91
SPG11-201ENST00000261866 C16orf54Q6UWD8 224 aa9.38□□□□□ -0.91
SPG11-201ENST00000261866 DLEU1O43261 78 aa9.38□□□□□ -0.91
SPG11-201ENST00000261866 CEND1Q8N111 149 aa9.38□□□□□ -0.91
SPG11-201ENST00000261866 ATRXP46100 2492 aa9.38□□□□□ -0.91
SPG11-201ENST00000261866 A0A0J9YWU9 116 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms