RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 OR10G8Q8NGN5 311 aa11.36□□□□□ -0.59
CCDC90B-201ENST00000260054 TMEM242Q9NWH2 141 aa11.36□□□□□ -0.59
CCDC90B-201ENST00000260054 V9GYV3 84 aa11.36□□□□□ -0.59
CCDC90B-201ENST00000260054 COL7A1Q02388 2944 aa11.36□□□□□ -0.59
CCDC90B-201ENST00000260054 PYY3Q5JQD4 70 aa11.36□□□□□ -0.59
CCDC90B-201ENST00000260054 C16orf74Q96GX8 76 aa11.36□□□□□ -0.59
CCDC90B-201ENST00000260054 IFITM10A6NMD0 228 aa11.35□□□□□ -0.59
CCDC90B-201ENST00000260054 CXCL1P09341 107 aa11.35□□□□□ -0.59
CCDC90B-201ENST00000260054 RNASE3P12724 160 aaKnown RBP11.35□□□□□ -0.59
CCDC90B-201ENST00000260054 ASIPP42127 132 aa11.35□□□□□ -0.59
CCDC90B-201ENST00000260054 ZNF493Q6ZR52 646 aa11.35□□□□□ -0.59
CCDC90B-201ENST00000260054 NHLRC4P0CG21 123 aaPredicted RBP11.34□□□□□ -0.59
CCDC90B-201ENST00000260054 EMP1P54849 157 aa11.34□□□□□ -0.59
CCDC90B-201ENST00000260054 RPS20P60866 119 aaKnown RBP11.34□□□□□ -0.59
CCDC90B-201ENST00000260054 IL17DQ8TAD2 202 aa11.34□□□□□ -0.59
CCDC90B-201ENST00000260054 H3BVH4 76 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 PPP1R2P9O14990 202 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 HIST1H2BKO60814 126 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 HIST1H2BJP06899 126 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 HIST1H2BOP23527 126 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 S100A4P26447 101 aaKnown RBP11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 HIST1H2BBP33778 126 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 TCL1AP56279 114 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 HIST1H2BDP58876 126 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 HIST1H2BCP62807 126 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 ZNF415Q09FC8 603 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 HIST2H2BEQ16778 126 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 CT83Q5H943 113 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 HIST3H2BBQ8N257 126 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 HIST1H2BHQ93079 126 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 HIST1H2BNQ99877 126 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 HIST1H2BMQ99879 126 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 TIMM8BQ9Y5J9 83 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 ARMS2P0C7Q2 107 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 SSTP61278 116 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 C9orf85Q96MD7 179 aa11.33□□□□□ -0.6
CCDC90B-201ENST00000260054 XKRY2A2RUG3 117 aa11.32□□□□□ -0.6
CCDC90B-201ENST00000260054 A8MWL6 223 aa11.32□□□□□ -0.6
CCDC90B-201ENST00000260054 IGLC6P0CF74 106 aa11.32□□□□□ -0.6
CCDC90B-201ENST00000260054 GTSF1Q8WW33 167 aa11.32□□□□□ -0.6
CCDC90B-201ENST00000260054 CTDSP1Q9GZU7 261 aa11.32□□□□□ -0.6
CCDC90B-201ENST00000260054 IL36BQ9NZH7 164 aa11.32□□□□□ -0.6
CCDC90B-201ENST00000260054 TGIF2-C20orf24A0A0A6YYL0 155 aa11.31□□□□□ -0.6
CCDC90B-201ENST00000260054 A0A0J9YWU9 116 aa11.31□□□□□ -0.6
CCDC90B-201ENST00000260054 SNURFLB1AK76 121 aa11.31□□□□□ -0.6
CCDC90B-201ENST00000260054 TSKUQ8WUA8 353 aa11.31□□□□□ -0.6
CCDC90B-201ENST00000260054 ANAPC16Q96DE5 110 aa11.31□□□□□ -0.6
CCDC90B-201ENST00000260054 FAM210BQ96KR6 192 aa11.31□□□□□ -0.6
CCDC90B-201ENST00000260054 C11orf68Q9H3H3 251 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-201ENST00000260054 NOP10Q9NPE3 64 aaKnown RBP11.31□□□□□ -0.6
CCDC90B-201ENST00000260054 SCRT2Q9NQ03 307 aa11.31□□□□□ -0.6
CCDC90B-201ENST00000260054 TRBV24-1A0A075B6N3 115 aa11.3□□□□□ -0.6
CCDC90B-201ENST00000260054 DAZ2Q13117 558 aaKnown RBP11.3□□□□□ -0.6
CCDC90B-201ENST00000260054 FER1L6-AS1Q8NA97 138 aa11.3□□□□□ -0.6
CCDC90B-201ENST00000260054 OR10D4PQ8NGN7 298 aa11.3□□□□□ -0.6
CCDC90B-201ENST00000260054 SSBP4Q9BWG4 385 aaPredicted RBP11.3□□□□□ -0.6
CCDC90B-201ENST00000260054 SNAI2O43623 268 aa11.3□□□□□ -0.6
CCDC90B-201ENST00000260054 TRGC2P03986 189 aa11.3□□□□□ -0.6
CCDC90B-201ENST00000260054 MED14OSP0DP75 135 aa11.3□□□□□ -0.6
CCDC90B-201ENST00000260054 TPPP3Q9BW30 176 aa11.3□□□□□ -0.6
CCDC90B-201ENST00000260054 CELA1Q9UNI1 258 aa11.3□□□□□ -0.6
CCDC90B-201ENST00000260054 MUC4Q99102 2169 aa11.29□□□□□ -0.6
CCDC90B-201ENST00000260054 MUC21A0A0G2JKD1 596 aa11.29□□□□□ -0.6
CCDC90B-201ENST00000260054 MUC21A0A140T8X8 626 aa11.29□□□□□ -0.6
CCDC90B-201ENST00000260054 OR5AL1P0C617 328 aa11.29□□□□□ -0.6
CCDC90B-201ENST00000260054 TRGC1P0CF51 173 aa11.29□□□□□ -0.6
CCDC90B-201ENST00000260054 PKIAP61925 76 aa11.29□□□□□ -0.6
CCDC90B-201ENST00000260054 FAM222AQ5U5X8 452 aa11.29□□□□□ -0.6
CCDC90B-201ENST00000260054 LYZL1Q6UWQ5 148 aa11.29□□□□□ -0.6
CCDC90B-201ENST00000260054 SPXQ9BT56 116 aa11.29□□□□□ -0.6
CCDC90B-201ENST00000260054 GFRA4Q9GZZ7 299 aa11.29□□□□□ -0.6
CCDC90B-201ENST00000260054 A0A1W2PPQ1 181 aa11.28□□□□□ -0.6
CCDC90B-201ENST00000260054 SMIM27A0A1W2PRY6 76 aa11.28□□□□□ -0.6
CCDC90B-201ENST00000260054 HIGD1CA8MV81 97 aa11.28□□□□□ -0.6
CCDC90B-201ENST00000260054 SPINK4O60575 86 aa11.28□□□□□ -0.6
CCDC90B-201ENST00000260054 OR10AG1Q8NH19 301 aa11.28□□□□□ -0.6
CCDC90B-201ENST00000260054 MRPL16Q9NX20 251 aaKnown RBP11.28□□□□□ -0.6
CCDC90B-201ENST00000260054 DKK2Q9UBU2 259 aa11.28□□□□□ -0.6
CCDC90B-201ENST00000260054 URGCP-MRPS24S4R325 110 aa11.28□□□□□ -0.6
CCDC90B-201ENST00000260054 STAB2Q8WWQ8 2551 aa11.28□□□□□ -0.6
CCDC90B-201ENST00000260054 FAM231BA6NCW3 169 aa11.27□□□□□ -0.6
CCDC90B-201ENST00000260054 TSTD3H0UI37 97 aa11.27□□□□□ -0.6
CCDC90B-201ENST00000260054 M0R2P5 195 aa11.27□□□□□ -0.6
CCDC90B-201ENST00000260054 CTRLP40313 264 aa11.27□□□□□ -0.6
CCDC90B-201ENST00000260054 FOXA3P55318 350 aaPredicted RBP11.27□□□□□ -0.6
CCDC90B-201ENST00000260054 Q6ZTI0 123 aa11.27□□□□□ -0.6
CCDC90B-201ENST00000260054 FRZBQ92765 325 aa11.27□□□□□ -0.6
CCDC90B-201ENST00000260054 PGLYRP4Q96LB8 373 aa11.27□□□□□ -0.6
CCDC90B-201ENST00000260054 PHLDA3Q9Y5J5 127 aa11.27□□□□□ -0.6
CCDC90B-201ENST00000260054 U3KQK5 164 aa11.27□□□□□ -0.6
CCDC90B-201ENST00000260054 TRGV1A0A0A0MS02 117 aa11.27□□□□□ -0.61
CCDC90B-201ENST00000260054 PHOX2AO14813 284 aa11.27□□□□□ -0.61
CCDC90B-201ENST00000260054 DMRTA1Q5VZB9 504 aa11.27□□□□□ -0.61
CCDC90B-201ENST00000260054 NUP35Q8NFH5 326 aa11.27□□□□□ -0.61
CCDC90B-201ENST00000260054 LYRM9A8MSI8 78 aa11.26□□□□□ -0.61
CCDC90B-201ENST00000260054 SPART-AS1P0CW21 52 aa11.26□□□□□ -0.61
CCDC90B-201ENST00000260054 LGALS9BQ3B8N2 356 aa11.26□□□□□ -0.61
CCDC90B-201ENST00000260054 ZNF876PQ49A33 203 aa11.26□□□□□ -0.61
CCDC90B-201ENST00000260054 RASL10AQ92737 203 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms