RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 IFITM10A6NMD0 228 aa12.83□□□□□ -0.36
SRSF1-201ENST00000258962 DMRTA1Q5VZB9 504 aa12.83□□□□□ -0.36
SRSF1-201ENST00000258962 ZNF493Q6ZR52 646 aa12.83□□□□□ -0.36
SRSF1-201ENST00000258962 SNAI2O43623 268 aa12.82□□□□□ -0.36
SRSF1-201ENST00000258962 AMBPP02760 352 aa12.82□□□□□ -0.36
SRSF1-201ENST00000258962 FXYD7P58549 80 aa12.82□□□□□ -0.36
SRSF1-201ENST00000258962 ALKBH7Q9BT30 221 aaPredicted RBP12.82□□□□□ -0.36
SRSF1-201ENST00000258962 OR11H12B2RN74 326 aa12.81□□□□□ -0.36
SRSF1-201ENST00000258962 H3BVH4 76 aa12.81□□□□□ -0.36
SRSF1-201ENST00000258962 CRXO43186 299 aaPredicted RBP12.81□□□□□ -0.36
SRSF1-201ENST00000258962 OR5AL1P0C617 328 aa12.81□□□□□ -0.36
SRSF1-201ENST00000258962 NTF3P20783 257 aa12.81□□□□□ -0.36
SRSF1-201ENST00000258962 SSTP61278 116 aa12.81□□□□□ -0.36
SRSF1-201ENST00000258962 DNLZQ5SXM8 178 aa12.81□□□□□ -0.36
SRSF1-201ENST00000258962 MSRB1Q9NZV6 116 aa12.81□□□□□ -0.36
SRSF1-201ENST00000258962 LOC102724200A0A096LPH7 203 aaPredicted RBP12.8□□□□□ -0.36
SRSF1-201ENST00000258962 GNRH2O43555 120 aa12.8□□□□□ -0.36
SRSF1-201ENST00000258962 RBMY1A1P0DJD3 496 aaKnown RBP12.8□□□□□ -0.36
SRSF1-201ENST00000258962 RBMY1CP0DJD4 496 aa12.8□□□□□ -0.36
SRSF1-201ENST00000258962 RBMY1FQ15415 496 aaKnown RBP12.8□□□□□ -0.36
SRSF1-201ENST00000258962 TMEM256Q8N2U0 113 aa12.8□□□□□ -0.36
SRSF1-201ENST00000258962 OR10AG1Q8NH19 301 aa12.8□□□□□ -0.36
SRSF1-201ENST00000258962 CLUHP3Q96NS8 147 aa12.8□□□□□ -0.36
SRSF1-201ENST00000258962 C19orf73Q9NVV2 129 aa12.8□□□□□ -0.36
SRSF1-201ENST00000258962 TP53TG3Q9ULZ0 132 aa12.8□□□□□ -0.36
SRSF1-201ENST00000258962 SERF1AO75920 110 aa12.79□□□□□ -0.36
SRSF1-201ENST00000258962 CD7P09564 240 aa12.79□□□□□ -0.36
SRSF1-201ENST00000258962 ASIPP42127 132 aa12.79□□□□□ -0.36
SRSF1-201ENST00000258962 CACNG7P62955 275 aa12.79□□□□□ -0.36
SRSF1-201ENST00000258962 SMIM15Q7Z3B0 74 aa12.79□□□□□ -0.36
SRSF1-201ENST00000258962 SAMD10Q9BYL1 202 aa12.79□□□□□ -0.36
SRSF1-201ENST00000258962 TWIST1Q15672 202 aa12.78□□□□□ -0.36
SRSF1-201ENST00000258962 TDRG1Q3Y452 100 aa12.78□□□□□ -0.36
SRSF1-201ENST00000258962 FAM159AQ6UWV7 190 aa12.78□□□□□ -0.36
SRSF1-201ENST00000258962 C18orf32Q8TCD1 76 aa12.78□□□□□ -0.36
SRSF1-201ENST00000258962 FAM110AQ9BQ89 295 aa12.78□□□□□ -0.36
SRSF1-201ENST00000258962 MED14OSP0DP75 135 aa12.78□□□□□ -0.36
SRSF1-201ENST00000258962 RNASE3P12724 160 aaKnown RBP12.78□□□□□ -0.36
SRSF1-201ENST00000258962 CMC4P56277 68 aaPredicted RBP12.78□□□□□ -0.36
SRSF1-201ENST00000258962 TRPT1Q86TN4 253 aaKnown RBP12.78□□□□□ -0.36
SRSF1-201ENST00000258962 GTSCR1Q86UQ5 136 aa12.78□□□□□ -0.36
SRSF1-201ENST00000258962 KCNS1Q96KK3 526 aa12.78□□□□□ -0.36
SRSF1-201ENST00000258962 SCRT2Q9NQ03 307 aa12.78□□□□□ -0.36
SRSF1-201ENST00000258962 DNAH3Q8TD57 4116 aa12.77□□□□□ -0.37
SRSF1-201ENST00000258962 IGHV4-4A0A075B6R2 117 aa12.77□□□□□ -0.37
SRSF1-201ENST00000258962 LINC00310P59036 64 aa12.77□□□□□ -0.37
SRSF1-201ENST00000258962 WFDC10AQ9H1F0 79 aa12.77□□□□□ -0.37
SRSF1-201ENST00000258962 TIMM8BQ9Y5J9 83 aaPredicted RBP12.77□□□□□ -0.37
SRSF1-201ENST00000258962 IGHV1OR15-1A0A075B7D0 117 aa12.76□□□□□ -0.37
SRSF1-201ENST00000258962 SPRY2O43597 315 aa12.76□□□□□ -0.37
SRSF1-201ENST00000258962 FAM104BQ5XKR9 115 aa12.76□□□□□ -0.37
SRSF1-201ENST00000258962 STHQ8IWL8 128 aa12.76□□□□□ -0.37
SRSF1-201ENST00000258962 B9D2Q9BPU9 175 aa12.76□□□□□ -0.37
SRSF1-201ENST00000258962 TMEM191AQ9H0A3 160 aa12.76□□□□□ -0.37
SRSF1-201ENST00000258962 MUC4Q99102 2169 aa12.76□□□□□ -0.37
SRSF1-201ENST00000258962 TGP01266 2768 aa12.75□□□□□ -0.37
SRSF1-201ENST00000258962 S100A4P26447 101 aaKnown RBP12.75□□□□□ -0.37
SRSF1-201ENST00000258962 JOSD1Q15040 202 aaPredicted RBP12.75□□□□□ -0.37
SRSF1-201ENST00000258962 AMN1Q8IY45 258 aa12.75□□□□□ -0.37
SRSF1-201ENST00000258962 CHCHD1Q96BP2 118 aaKnown RBP12.75□□□□□ -0.37
SRSF1-201ENST00000258962 NIT2Q9NQR4 276 aa12.75□□□□□ -0.37
SRSF1-201ENST00000258962 NUPR1O60356 82 aa12.74□□□□□ -0.37
SRSF1-201ENST00000258962 PPBPP02775 128 aa12.74□□□□□ -0.37
SRSF1-201ENST00000258962 PMCHP20382 165 aa12.74□□□□□ -0.37
SRSF1-201ENST00000258962 PRKDCP78527 4128 aaKnown RBP12.74□□□□□ -0.37
SRSF1-201ENST00000258962 IGHV3-16A0A0C4DH30 117 aa12.73□□□□□ -0.37
SRSF1-201ENST00000258962 HSBP1O75506 76 aa12.73□□□□□ -0.37
SRSF1-201ENST00000258962 RAB4AP20338 218 aa12.73□□□□□ -0.37
SRSF1-201ENST00000258962 IQCJQ1A5X6 159 aa12.73□□□□□ -0.37
SRSF1-201ENST00000258962 PYY3Q5JQD4 70 aa12.73□□□□□ -0.37
SRSF1-201ENST00000258962 SPANXN1Q5VSR9 72 aa12.73□□□□□ -0.37
SRSF1-201ENST00000258962 Q8N1Y9 231 aa12.73□□□□□ -0.37
SRSF1-201ENST00000258962 RNF185Q96GF1 192 aa12.73□□□□□ -0.37
SRSF1-201ENST00000258962 ORMDL3Q8N138 153 aa12.72□□□□□ -0.37
SRSF1-201ENST00000258962 RCHY1Q96PM5 261 aa12.72□□□□□ -0.37
SRSF1-201ENST00000258962 NXPH4O95158 308 aa12.72□□□□□ -0.37
SRSF1-201ENST00000258962 AMTP48728 403 aa12.72□□□□□ -0.37
SRSF1-201ENST00000258962 S100A12P80511 92 aa12.72□□□□□ -0.37
SRSF1-201ENST00000258962 MRPL51Q4U2R6 128 aaKnown RBP12.72□□□□□ -0.37
SRSF1-201ENST00000258962 NIT1Q86X76 327 aa12.72□□□□□ -0.37
SRSF1-201ENST00000258962 C9orf85Q96MD7 179 aa12.72□□□□□ -0.37
SRSF1-201ENST00000258962 MDFICQ9P1T7 246 aa12.72□□□□□ -0.37
SRSF1-201ENST00000258962 LAMTOR2Q9Y2Q5 125 aa12.72□□□□□ -0.37
SRSF1-201ENST00000258962 PHLDA3Q9Y5J5 127 aa12.72□□□□□ -0.37
SRSF1-201ENST00000258962 U3KQK5 164 aa12.72□□□□□ -0.37
SRSF1-201ENST00000258962 M0R381 172 aa12.71□□□□□ -0.38
SRSF1-201ENST00000258962 EVI2AP22794 236 aa12.71□□□□□ -0.38
SRSF1-201ENST00000258962 INSP01308 110 aa12.7□□□□□ -0.38
SRSF1-201ENST00000258962 IGHV4-30-4P0DP06 118 aa12.7□□□□□ -0.38
SRSF1-201ENST00000258962 CKS2P33552 79 aa12.7□□□□□ -0.38
SRSF1-201ENST00000258962 RNASEKQ6P5S7 137 aaKnown RBP12.7□□□□□ -0.38
SRSF1-201ENST00000258962 PRELID3AQ96N28 172 aa12.7□□□□□ -0.38
SRSF1-201ENST00000258962 C20orf144Q9BQM9 153 aa12.7□□□□□ -0.38
SRSF1-201ENST00000258962 XCL2Q9UBD3 114 aa12.7□□□□□ -0.38
SRSF1-201ENST00000258962 D6R8Y8 96 aa12.69□□□□□ -0.38
SRSF1-201ENST00000258962 LINC00614P0C842 121 aa12.69□□□□□ -0.38
SRSF1-201ENST00000258962 NHLRC4P0CG21 123 aaPredicted RBP12.69□□□□□ -0.38
SRSF1-201ENST00000258962 TRGV11A0A075B6L2 103 aa12.68□□□□□ -0.38
SRSF1-201ENST00000258962 CBY3A6NI87 242 aa12.68□□□□□ -0.38
SRSF1-201ENST00000258962 GIG44P09565 113 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms