RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 IGHV4-31P0DP07 118 aa11.14□□□□□ -0.63
TRAFD1-201ENST00000257604 C9orf118A6NHY6 69 aa11.14□□□□□ -0.63
TRAFD1-201ENST00000257604 H3BVH4 76 aa11.14□□□□□ -0.63
TRAFD1-201ENST00000257604 DSCR9P59020 149 aa11.14□□□□□ -0.63
TRAFD1-201ENST00000257604 GTSCR1Q86UQ5 136 aa11.14□□□□□ -0.63
TRAFD1-201ENST00000257604 C11orf21Q9P2W6 132 aa11.14□□□□□ -0.63
TRAFD1-201ENST00000257604 SPCS1Q9Y6A9 102 aa11.14□□□□□ -0.63
TRAFD1-201ENST00000257604 IGKV2D-26A0A0A0MRZ7 120 aa11.13□□□□□ -0.63
TRAFD1-201ENST00000257604 PRSS1P07477 247 aa11.13□□□□□ -0.63
TRAFD1-201ENST00000257604 SEC11AP67812 179 aa11.13□□□□□ -0.63
TRAFD1-201ENST00000257604 MRPL51Q4U2R6 128 aaKnown RBP11.13□□□□□ -0.63
TRAFD1-201ENST00000257604 OR2K2Q8NGT1 345 aa11.13□□□□□ -0.63
TRAFD1-201ENST00000257604 TRAV26-1A0A087WT03 109 aa11.13□□□□□ -0.63
TRAFD1-201ENST00000257604 A6NDN8 102 aa11.13□□□□□ -0.63
TRAFD1-201ENST00000257604 SCGB2A2Q13296 93 aa11.13□□□□□ -0.63
TRAFD1-201ENST00000257604 GTF2H5Q6ZYL4 71 aa11.13□□□□□ -0.63
TRAFD1-201ENST00000257604 SPANXN1Q5VSR9 72 aa11.12□□□□□ -0.63
TRAFD1-201ENST00000257604 ORMDL3Q8N138 153 aa11.12□□□□□ -0.63
TRAFD1-201ENST00000257604 SLC50A1Q9BRV3 221 aa11.12□□□□□ -0.63
TRAFD1-201ENST00000257604 OR10J6PQ8NGY7 276 aa11.12□□□□□ -0.63
TRAFD1-201ENST00000257604 IFI27L1Q96BM0 104 aa11.12□□□□□ -0.63
TRAFD1-201ENST00000257604 PRR9Q5T870 116 aa11.12□□□□□ -0.63
TRAFD1-201ENST00000257604 FAM104BQ5XKR9 115 aa11.12□□□□□ -0.63
TRAFD1-201ENST00000257604 UFSP1Q6NVU6 142 aa11.11□□□□□ -0.63
TRAFD1-201ENST00000257604 BOD1L2Q8IYS8 172 aa11.11□□□□□ -0.63
TRAFD1-201ENST00000257604 FXYD2P54710 66 aa11.11□□□□□ -0.63
TRAFD1-201ENST00000257604 PSMG4Q5JS54 123 aa11.11□□□□□ -0.63
TRAFD1-201ENST00000257604 TRAV12-2A0A075B6T6 113 aa11.1□□□□□ -0.63
TRAFD1-201ENST00000257604 H3BRM9 83 aa11.1□□□□□ -0.63
TRAFD1-201ENST00000257604 RPS20P60866 119 aaKnown RBP11.1□□□□□ -0.63
TRAFD1-201ENST00000257604 AMTNQ6UX39 209 aa11.1□□□□□ -0.63
TRAFD1-201ENST00000257604 DAZ1Q9NQZ3 744 aaKnown RBP11.1□□□□□ -0.63
TRAFD1-201ENST00000257604 NHP2Q9NX24 153 aaKnown RBP11.1□□□□□ -0.63
TRAFD1-201ENST00000257604 HBDP02042 147 aa11.1□□□□□ -0.63
TRAFD1-201ENST00000257604 USMG5Q96IX5 58 aa11.1□□□□□ -0.63
TRAFD1-201ENST00000257604 SETXQ7Z333 2677 aaKnown RBP11.1□□□□□ -0.63
TRAFD1-201ENST00000257604 IGKV3D-20A0A0C4DH25 116 aa11.1□□□□□ -0.63
TRAFD1-201ENST00000257604 K7EP34 96 aa11.1□□□□□ -0.63
TRAFD1-201ENST00000257604 NDUFA4O00483 81 aa11.1□□□□□ -0.63
TRAFD1-201ENST00000257604 AZU1P20160 251 aa11.1□□□□□ -0.63
TRAFD1-201ENST00000257604 ADAMTSL5Q6ZMM2 481 aa11.1□□□□□ -0.63
TRAFD1-201ENST00000257604 TMEM160Q9NX00 188 aa11.1□□□□□ -0.63
TRAFD1-201ENST00000257604 LEPP41159 167 aa11.09□□□□□ -0.63
TRAFD1-201ENST00000257604 CRYBA4P53673 196 aa11.09□□□□□ -0.63
TRAFD1-201ENST00000257604 GNRH2O43555 120 aa11.08□□□□□ -0.64
TRAFD1-201ENST00000257604 GATA3P23771 443 aa11.08□□□□□ -0.64
TRAFD1-201ENST00000257604 HSD52Q0P140 79 aa11.08□□□□□ -0.64
TRAFD1-201ENST00000257604 FOXC2Q99958 501 aa11.08□□□□□ -0.64
TRAFD1-201ENST00000257604 VPREB3Q9UKI3 123 aa11.08□□□□□ -0.64
TRAFD1-201ENST00000257604 SLURP1P55000 103 aa11.08□□□□□ -0.64
TRAFD1-201ENST00000257604 LGALS9BQ3B8N2 356 aa11.08□□□□□ -0.64
TRAFD1-201ENST00000257604 LGALS9CQ6DKI2 356 aa11.08□□□□□ -0.64
TRAFD1-201ENST00000257604 GPHB5Q86YW7 130 aa11.08□□□□□ -0.64
TRAFD1-201ENST00000257604 IGHV4OR15-8A0A075B7B6 117 aa11.08□□□□□ -0.64
TRAFD1-201ENST00000257604 A0A087WW49 117 aa11.08□□□□□ -0.64
TRAFD1-201ENST00000257604 IGHV7-4-1A0A0J9YVY3 117 aa11.08□□□□□ -0.64
TRAFD1-201ENST00000257604 TEX48A0A1B0GUV7 120 aa11.08□□□□□ -0.64
TRAFD1-201ENST00000257604 MGPP08493 103 aa11.08□□□□□ -0.64
TRAFD1-201ENST00000257604 SRSF2Q01130 221 aaKnown RBP11.08□□□□□ -0.64
TRAFD1-201ENST00000257604 TMEM190Q8WZ59 177 aa11.08□□□□□ -0.64
TRAFD1-201ENST00000257604 TRAV12-3A0A0B4J271 114 aa11.07□□□□□ -0.64
TRAFD1-201ENST00000257604 A0A1W2PPM0 123 aa11.07□□□□□ -0.64
TRAFD1-201ENST00000257604 G3V4G9 280 aa11.07□□□□□ -0.64
TRAFD1-201ENST00000257604 C19orf54Q5BKX5 351 aa11.06□□□□□ -0.64
TRAFD1-201ENST00000257604 A0A096LNT2 108 aa11.06□□□□□ -0.64
TRAFD1-201ENST00000257604 CR1P17927 2039 aa11.06□□□□□ -0.64
TRAFD1-201ENST00000257604 SAMD5Q5TGI4 173 aa11.06□□□□□ -0.64
TRAFD1-201ENST00000257604 SH2D6Q7Z4S9 175 aa11.06□□□□□ -0.64
TRAFD1-201ENST00000257604 ZNF493Q6ZR52 646 aa11.06□□□□□ -0.64
TRAFD1-201ENST00000257604 C9orf139Q6ZV77 190 aa11.06□□□□□ -0.64
TRAFD1-201ENST00000257604 IGLV1-40P01703 118 aa11.05□□□□□ -0.64
TRAFD1-201ENST00000257604 DPF1Q92782 380 aa11.05□□□□□ -0.64
TRAFD1-201ENST00000257604 YAE1D1Q9NRH1 226 aa11.05□□□□□ -0.64
TRAFD1-201ENST00000257604 SMPXQ9UHP9 88 aa11.05□□□□□ -0.64
TRAFD1-201ENST00000257604 FABP2P12104 132 aa11.05□□□□□ -0.64
TRAFD1-201ENST00000257604 PSMB8P28062 276 aa11.05□□□□□ -0.64
TRAFD1-201ENST00000257604 PRM2P04554 102 aa11.04□□□□□ -0.64
TRAFD1-201ENST00000257604 HOXD3P31249 432 aaPredicted RBP11.04□□□□□ -0.64
TRAFD1-201ENST00000257604 ANXA2RQ3ZCQ2 193 aa11.04□□□□□ -0.64
TRAFD1-201ENST00000257604 C14orf178Q8N769 122 aaPredicted RBP11.04□□□□□ -0.64
TRAFD1-201ENST00000257604 OR9G4Q8NGQ1 327 aa11.04□□□□□ -0.64
TRAFD1-201ENST00000257604 SMR3AQ99954 134 aa11.04□□□□□ -0.64
TRAFD1-201ENST00000257604 PHLDA3Q9Y5J5 127 aa11.04□□□□□ -0.64
TRAFD1-201ENST00000257604 A0A1B0GW15 77 aa11.04□□□□□ -0.64
TRAFD1-201ENST00000257604 ZC2HC1BQ5TFG8 222 aa11.04□□□□□ -0.64
TRAFD1-201ENST00000257604 Q6AWC8 147 aa11.04□□□□□ -0.64
TRAFD1-201ENST00000257604 A0A1B0GV72 72 aa11.04□□□□□ -0.64
TRAFD1-201ENST00000257604 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.04□□□□□ -0.64
TRAFD1-201ENST00000257604 WFDC2Q14508 124 aa11.04□□□□□ -0.64
TRAFD1-201ENST00000257604 FAM74A4Q5TZK3 123 aa11.04□□□□□ -0.64
TRAFD1-201ENST00000257604 TMEM158Q8WZ71 300 aa11.04□□□□□ -0.64
TRAFD1-201ENST00000257604 KLK9Q9UKQ9 250 aa11.04□□□□□ -0.64
TRAFD1-201ENST00000257604 SMIM13P0DJ93 91 aa11.03□□□□□ -0.64
TRAFD1-201ENST00000257604 CKS1BP61024 79 aa11.03□□□□□ -0.64
TRAFD1-201ENST00000257604 SPINK13Q1W4C9 94 aa11.03□□□□□ -0.64
TRAFD1-201ENST00000257604 OR11H1Q8NG94 326 aa11.03□□□□□ -0.64
TRAFD1-201ENST00000257604 U3KQE9 123 aa11.03□□□□□ -0.64
TRAFD1-201ENST00000257604 U3KQK5 164 aa11.03□□□□□ -0.64
TRAFD1-201ENST00000257604 TEP1Q99973 2627 aaKnown RBP11.03□□□□□ -0.64
TRAFD1-201ENST00000257604 H3BMG7 143 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms