RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 CREBBPQ92793 2442 aa9.18□□□□□ -0.94
CCNA1-201ENST00000255465 CCDC168Q8NDH2 2452 aa9.17□□□□□ -0.94
CCNA1-201ENST00000255465 LINC00473A8K010 186 aa9.17□□□□□ -0.94
CCNA1-201ENST00000255465 CKS2P33552 79 aa9.17□□□□□ -0.94
CCNA1-201ENST00000255465 SRSF9Q13242 221 aaKnown RBP eCLIP9.17□□□□□ -0.94
CCNA1-201ENST00000255465 SRSF12Q8WXF0 261 aaKnown RBP9.17□□□□□ -0.94
CCNA1-201ENST00000255465 C2orf48Q96LS8 159 aa9.17□□□□□ -0.94
CCNA1-201ENST00000255465 CCL19Q99731 98 aa9.17□□□□□ -0.94
CCNA1-201ENST00000255465 OTORQ9NRC9 128 aa9.17□□□□□ -0.94
CCNA1-201ENST00000255465 PRRC2AP48634 2157 aaKnown RBP9.17□□□□□ -0.94
CCNA1-201ENST00000255465 F8VRH5 84 aa9.17□□□□□ -0.94
CCNA1-201ENST00000255465 C4orf26Q17RF5 130 aa9.17□□□□□ -0.94
CCNA1-201ENST00000255465 Q8N8P6 123 aa9.17□□□□□ -0.94
CCNA1-201ENST00000255465 MRPL35Q9NZE8 188 aaKnown RBP9.17□□□□□ -0.94
CCNA1-201ENST00000255465 FSTL3O95633 263 aa9.16□□□□□ -0.94
CCNA1-201ENST00000255465 CD69Q07108 199 aa9.16□□□□□ -0.94
CCNA1-201ENST00000255465 DEFB113Q30KQ7 82 aa9.16□□□□□ -0.94
CCNA1-201ENST00000255465 ASPHD1Q5U4P2 390 aa9.16□□□□□ -0.94
CCNA1-201ENST00000255465 C5orf38Q86SI9 138 aa9.16□□□□□ -0.94
CCNA1-201ENST00000255465 PLEKHB2Q96CS7 222 aa9.16□□□□□ -0.94
CCNA1-201ENST00000255465 IGKV1OR2-108A0A075B7D4 117 aa9.15□□□□□ -0.94
CCNA1-201ENST00000255465 A0A0B4J2C4 111 aa9.15□□□□□ -0.94
CCNA1-201ENST00000255465 PYYP10082 97 aa9.15□□□□□ -0.94
CCNA1-201ENST00000255465 LOXL3P58215 753 aa9.15□□□□□ -0.94
CCNA1-201ENST00000255465 HIST1H4AP62805 103 aaKnown RBP9.15□□□□□ -0.94
CCNA1-201ENST00000255465 MZT1Q08AG7 82 aa9.15□□□□□ -0.94
CCNA1-201ENST00000255465 NUP37Q8NFH4 326 aa9.15□□□□□ -0.94
CCNA1-201ENST00000255465 INS-IGF2F8WCM5 200 aa9.15□□□□□ -0.95
CCNA1-201ENST00000255465 MRPS12O15235 138 aaKnown RBP9.15□□□□□ -0.95
CCNA1-201ENST00000255465 NGFP01138 241 aa9.15□□□□□ -0.95
CCNA1-201ENST00000255465 PSMB8P28062 276 aa9.15□□□□□ -0.95
CCNA1-201ENST00000255465 SUB1P53999 127 aaKnown RBP eCLIP9.15□□□□□ -0.95
CCNA1-201ENST00000255465 SIGLEC15Q6ZMC9 328 aa9.15□□□□□ -0.95
CCNA1-201ENST00000255465 TMEM75Q8N9X5 138 aa9.15□□□□□ -0.95
CCNA1-201ENST00000255465 RNF125Q96EQ8 232 aa9.15□□□□□ -0.95
CCNA1-201ENST00000255465 BEX4Q9NWD9 120 aaPredicted RBP9.15□□□□□ -0.95
CCNA1-201ENST00000255465 TEP1Q99973 2627 aaKnown RBP9.14□□□□□ -0.95
CCNA1-201ENST00000255465 C12orf77C9JDV5 145 aa9.14□□□□□ -0.95
CCNA1-201ENST00000255465 FCGR3BO75015 233 aa9.14□□□□□ -0.95
CCNA1-201ENST00000255465 CFC1BP0CG36 223 aa9.14□□□□□ -0.95
CCNA1-201ENST00000255465 CFC1P0CG37 223 aa9.14□□□□□ -0.95
CCNA1-201ENST00000255465 PRCDQ00LT1 54 aa9.14□□□□□ -0.95
CCNA1-201ENST00000255465 C11orf71Q6IPW1 123 aa9.14□□□□□ -0.95
CCNA1-201ENST00000255465 C1orf43Q9BWL3 253 aa9.14□□□□□ -0.95
CCNA1-201ENST00000255465 LINC00527Q9UJ94 153 aa9.14□□□□□ -0.95
CCNA1-201ENST00000255465 PYGO1Q9Y3Y4 419 aa9.14□□□□□ -0.95
CCNA1-201ENST00000255465 AKAP9Q99996 3911 aa9.13□□□□□ -0.95
CCNA1-201ENST00000255465 TRAV13-1A0A0B4J241 112 aa9.13□□□□□ -0.95
CCNA1-201ENST00000255465 SDIM1Q6ZPB5 146 aa9.13□□□□□ -0.95
CCNA1-201ENST00000255465 TMEM86BQ8N661 226 aa9.13□□□□□ -0.95
CCNA1-201ENST00000255465 THAP8Q8NA92 274 aa9.13□□□□□ -0.95
CCNA1-201ENST00000255465 LINC00477Q96M19 166 aa9.13□□□□□ -0.95
CCNA1-201ENST00000255465 S1PR3Q99500 378 aa9.13□□□□□ -0.95
CCNA1-201ENST00000255465 KLK5Q9Y337 293 aaPredicted RBP9.13□□□□□ -0.95
CCNA1-201ENST00000255465 TRBV30A0A0K0K1B3 111 aa9.13□□□□□ -0.95
CCNA1-201ENST00000255465 SCGB1D4Q6XE38 83 aa9.13□□□□□ -0.95
CCNA1-201ENST00000255465 PRIMA1Q86XR5 153 aa9.13□□□□□ -0.95
CCNA1-201ENST00000255465 AGPAT4-IT1Q9H0P7 198 aa9.13□□□□□ -0.95
CCNA1-201ENST00000255465 CXXC4Q9H2H0 198 aa9.13□□□□□ -0.95
CCNA1-201ENST00000255465 TEX49A0A1B0GTD5 131 aa9.12□□□□□ -0.95
CCNA1-201ENST00000255465 ZNF815PA8K554 130 aa9.12□□□□□ -0.95
CCNA1-201ENST00000255465 SRSF2Q01130 221 aaKnown RBP9.12□□□□□ -0.95
CCNA1-201ENST00000255465 MSMPQ1L6U9 139 aa9.12□□□□□ -0.95
CCNA1-201ENST00000255465 MORN5Q5VZ52 161 aa9.12□□□□□ -0.95
CCNA1-201ENST00000255465 GOLT1AQ6ZVE7 132 aa9.12□□□□□ -0.95
CCNA1-201ENST00000255465 C9orf85Q96MD7 179 aa9.12□□□□□ -0.95
CCNA1-201ENST00000255465 SHANK2-AS3Q9BTD1 123 aa9.12□□□□□ -0.95
CCNA1-201ENST00000255465 TET2Q6N021 2002 aaPredicted RBP9.12□□□□□ -0.95
CCNA1-201ENST00000255465 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.11□□□□□ -0.95
CCNA1-201ENST00000255465 IGHV3-33P01772 117 aa9.11□□□□□ -0.95
CCNA1-201ENST00000255465 CCL8P80075 99 aa9.11□□□□□ -0.95
CCNA1-201ENST00000255465 PAPPA-AS1Q5QFB9 102 aa9.11□□□□□ -0.95
CCNA1-201ENST00000255465 C2orf82Q6UX34 121 aa9.11□□□□□ -0.95
CCNA1-201ENST00000255465 Q9H3A6 140 aa9.11□□□□□ -0.95
CCNA1-201ENST00000255465 LY6LH3BQJ8 138 aa9.11□□□□□ -0.95
CCNA1-201ENST00000255465 TIMM8AO60220 97 aaPredicted RBP9.11□□□□□ -0.95
CCNA1-201ENST00000255465 IGLV2-11P01706 119 aa9.11□□□□□ -0.95
CCNA1-201ENST00000255465 PATE2Q6UY27 113 aa9.11□□□□□ -0.95
CCNA1-201ENST00000255465 METTL26Q96S19 204 aa9.11□□□□□ -0.95
CCNA1-201ENST00000255465 TMEM14CQ9P0S9 112 aa9.11□□□□□ -0.95
CCNA1-201ENST00000255465 OTOGQ6ZRI0 2925 aa9.1□□□□□ -0.95
CCNA1-201ENST00000255465 MED13LQ71F56 2210 aa9.1□□□□□ -0.95
CCNA1-201ENST00000255465 EPM2AB3EWF7 344 aa9.1□□□□□ -0.95
CCNA1-201ENST00000255465 IGHV3-30P01768 117 aa9.1□□□□□ -0.95
CCNA1-201ENST00000255465 IGHV3-30-5P0DP03 117 aa9.1□□□□□ -0.95
CCNA1-201ENST00000255465 COX8CQ7Z4L0 72 aa9.1□□□□□ -0.95
CCNA1-201ENST00000255465 KRTAP1-3Q8IUG1 177 aa9.1□□□□□ -0.95
CCNA1-201ENST00000255465 C20orf173Q96LM9 149 aa9.1□□□□□ -0.95
CCNA1-201ENST00000255465 A0A0J9YY99 117 aa9.09□□□□□ -0.95
CCNA1-201ENST00000255465 J3QQQ9 107 aa9.09□□□□□ -0.95
CCNA1-201ENST00000255465 SPINT2O43291 252 aa9.09□□□□□ -0.95
CCNA1-201ENST00000255465 ELANEP08246 267 aa9.09□□□□□ -0.95
CCNA1-201ENST00000255465 RNASE2P10153 161 aaKnown RBP9.09□□□□□ -0.95
CCNA1-201ENST00000255465 PFN2P35080 140 aa9.09□□□□□ -0.95
CCNA1-201ENST00000255465 PRSS12P56730 875 aa9.09□□□□□ -0.95
CCNA1-201ENST00000255465 HERVK_113P61574 105 aa9.09□□□□□ -0.95
CCNA1-201ENST00000255465 LAGE3Q14657 143 aa9.09□□□□□ -0.95
CCNA1-201ENST00000255465 LYZL1Q6UWQ5 148 aa9.09□□□□□ -0.95
CCNA1-201ENST00000255465 LYPD1Q8N2G4 141 aa9.09□□□□□ -0.95
CCNA1-201ENST00000255465 SLC25A29Q8N8R3 303 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms