RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 CCL21O00585 134 aa12.28□□□□□ -0.44
SLC6A8-201ENST00000253122 CRYGBP07316 175 aa12.28□□□□□ -0.44
SLC6A8-201ENST00000253122 CD7P09564 240 aa12.28□□□□□ -0.44
SLC6A8-201ENST00000253122 PRR30Q53SZ7 412 aaPredicted RBP12.28□□□□□ -0.44
SLC6A8-201ENST00000253122 PAPPA-AS1Q5QFB9 102 aa12.28□□□□□ -0.44
SLC6A8-201ENST00000253122 TMEM219Q86XT9 240 aa12.28□□□□□ -0.44
SLC6A8-201ENST00000253122 TRBV20-1A0A075B6N2 111 aa12.27□□□□□ -0.44
SLC6A8-201ENST00000253122 PPP1R17O96001 155 aa12.27□□□□□ -0.44
SLC6A8-201ENST00000253122 OR11H6Q8NGC7 330 aa12.27□□□□□ -0.44
SLC6A8-201ENST00000253122 LY6EQ16553 131 aa12.27□□□□□ -0.45
SLC6A8-201ENST00000253122 LGALS1P09382 135 aaKnown RBP12.27□□□□□ -0.45
SLC6A8-201ENST00000253122 DEFB1P60022 68 aa12.27□□□□□ -0.45
SLC6A8-201ENST00000253122 ZNF48Q96MX3 618 aaPredicted RBP12.27□□□□□ -0.45
SLC6A8-201ENST00000253122 KLRB1Q12918 225 aa12.26□□□□□ -0.45
SLC6A8-201ENST00000253122 ATP6V0E1O15342 81 aa12.26□□□□□ -0.45
SLC6A8-201ENST00000253122 PAX8Q06710 450 aa12.26□□□□□ -0.45
SLC6A8-201ENST00000253122 C3orf56Q8N813 242 aa12.26□□□□□ -0.45
SLC6A8-201ENST00000253122 Q8NA96 180 aa12.26□□□□□ -0.45
SLC6A8-201ENST00000253122 FCN3O75636 299 aa12.25□□□□□ -0.45
SLC6A8-201ENST00000253122 KALRNO60229 2985 aa12.25□□□□□ -0.45
SLC6A8-201ENST00000253122 ZNF688P0C7X2 276 aa12.25□□□□□ -0.45
SLC6A8-201ENST00000253122 DUSP14O95147 198 aaKnown RBP12.25□□□□□ -0.45
SLC6A8-201ENST00000253122 C16orf54Q6UWD8 224 aa12.25□□□□□ -0.45
SLC6A8-201ENST00000253122 ATMQ13315 3056 aa12.24□□□□□ -0.45
SLC6A8-201ENST00000253122 PRO1854Q9UHT4 67 aa12.24□□□□□ -0.45
SLC6A8-201ENST00000253122 SLC25A20O43772 301 aa12.24□□□□□ -0.45
SLC6A8-201ENST00000253122 HOXB4P17483 251 aaPredicted RBP12.24□□□□□ -0.45
SLC6A8-201ENST00000253122 RNF183Q96D59 192 aa12.24□□□□□ -0.45
SLC6A8-201ENST00000253122 FN1P02751 2386 aaKnown RBP12.24□□□□□ -0.45
SLC6A8-201ENST00000253122 MRGPRG-AS1Q2M3A8 158 aa12.24□□□□□ -0.45
SLC6A8-201ENST00000253122 PLEKHB2Q96CS7 222 aa12.24□□□□□ -0.45
SLC6A8-201ENST00000253122 F6UB75 175 aa12.23□□□□□ -0.45
SLC6A8-201ENST00000253122 GNRH2O43555 120 aa12.23□□□□□ -0.45
SLC6A8-201ENST00000253122 BUB3O43684 328 aa12.23□□□□□ -0.45
SLC6A8-201ENST00000253122 TEN1Q86WV5 123 aa12.23□□□□□ -0.45
SLC6A8-201ENST00000253122 GATD1Q8NB37 220 aa12.23□□□□□ -0.45
SLC6A8-201ENST00000253122 DMXL2Q8TDJ6 3036 aa12.23□□□□□ -0.45
SLC6A8-201ENST00000253122 TRAV8-4A0A0B4J246 113 aa12.23□□□□□ -0.45
SLC6A8-201ENST00000253122 PRSS47A8MTI9 375 aa12.23□□□□□ -0.45
SLC6A8-201ENST00000253122 ZFYVE26Q68DK2 2539 aa12.23□□□□□ -0.45
SLC6A8-201ENST00000253122 DGAT2L7PQ6IED9 249 aa12.23□□□□□ -0.45
SLC6A8-201ENST00000253122 TRAV12-3A0A0B4J271 114 aa12.23□□□□□ -0.45
SLC6A8-201ENST00000253122 LOC400499M0QZD8 3231 aa12.22□□□□□ -0.45
SLC6A8-201ENST00000253122 Q6ZQT7 251 aa12.22□□□□□ -0.45
SLC6A8-201ENST00000253122 Q6ZUT4 128 aa12.22□□□□□ -0.45
SLC6A8-201ENST00000253122 NTN5Q8WTR8 489 aaPredicted RBP12.22□□□□□ -0.45
SLC6A8-201ENST00000253122 SMAD5-AS1Q9Y6J3 95 aa12.22□□□□□ -0.45
SLC6A8-201ENST00000253122 KHDC1LQ5JSQ8 128 aa12.22□□□□□ -0.45
SLC6A8-201ENST00000253122 ASPMQ8IZT6 3477 aa12.22□□□□□ -0.45
SLC6A8-201ENST00000253122 RAI1Q7Z5J4 1906 aaPredicted RBP12.22□□□□□ -0.45
SLC6A8-201ENST00000253122 BAALCQ8WXS3 180 aa12.22□□□□□ -0.45
SLC6A8-201ENST00000253122 SPATA25Q9BR10 227 aa12.22□□□□□ -0.45
SLC6A8-201ENST00000253122 TSPAN13O95857 204 aa12.21□□□□□ -0.45
SLC6A8-201ENST00000253122 PMVKQ15126 192 aa12.21□□□□□ -0.45
SLC6A8-201ENST00000253122 DMXL1Q9Y485 3027 aa12.21□□□□□ -0.45
SLC6A8-201ENST00000253122 ANKRD29Q8N6D5 301 aa12.21□□□□□ -0.45
SLC6A8-201ENST00000253122 C11orf21Q9P2W6 132 aa12.21□□□□□ -0.45
SLC6A8-201ENST00000253122 ADARB2-AS1A8MUL3 147 aa12.21□□□□□ -0.46
SLC6A8-201ENST00000253122 VCYO14598 125 aa12.21□□□□□ -0.46
SLC6A8-201ENST00000253122 AKAP13Q12802 2813 aa12.2□□□□□ -0.46
SLC6A8-201ENST00000253122 RPL39P62891 51 aaKnown RBP12.2□□□□□ -0.46
SLC6A8-201ENST00000253122 C9orf139Q6ZV77 190 aa12.2□□□□□ -0.46
SLC6A8-201ENST00000253122 LINC00477Q96M19 166 aa12.2□□□□□ -0.46
SLC6A8-201ENST00000253122 C11orf86A6NJI1 115 aa12.2□□□□□ -0.46
SLC6A8-201ENST00000253122 MRPS12O15235 138 aaKnown RBP12.2□□□□□ -0.46
SLC6A8-201ENST00000253122 SPXQ9BT56 116 aa12.2□□□□□ -0.46
SLC6A8-201ENST00000253122 TCTEX1D4Q5JR98 221 aa12.2□□□□□ -0.46
SLC6A8-201ENST00000253122 C2orf82Q6UX34 121 aa12.2□□□□□ -0.46
SLC6A8-201ENST00000253122 IGHV7-81A0A0B4J1V7 117 aa12.19□□□□□ -0.46
SLC6A8-201ENST00000253122 J3QQQ9 107 aa12.19□□□□□ -0.46
SLC6A8-201ENST00000253122 TCL1BO95988 128 aa12.19□□□□□ -0.46
SLC6A8-201ENST00000253122 IGF1P05019 195 aa12.19□□□□□ -0.46
SLC6A8-201ENST00000253122 ID1P41134 155 aa12.19□□□□□ -0.46
SLC6A8-201ENST00000253122 SDHAF1A6NFY7 115 aa12.19□□□□□ -0.46
SLC6A8-201ENST00000253122 OVOL1O14753 267 aa12.19□□□□□ -0.46
SLC6A8-201ENST00000253122 TACC2O95359 2948 aa12.18□□□□□ -0.46
SLC6A8-201ENST00000253122 GAGE5Q13069 117 aa12.18□□□□□ -0.46
SLC6A8-201ENST00000253122 GAGE6Q13070 117 aa12.18□□□□□ -0.46
SLC6A8-201ENST00000253122 PHLDA1Q8WV24 401 aaPredicted RBP12.18□□□□□ -0.46
SLC6A8-201ENST00000253122 PKD1L2Q7Z442 2459 aa12.18□□□□□ -0.46
SLC6A8-201ENST00000253122 XGP55808 180 aa12.18□□□□□ -0.46
SLC6A8-201ENST00000253122 FAM110DQ8TAY7 271 aaPredicted RBP12.18□□□□□ -0.46
SLC6A8-201ENST00000253122 TRAV12-1A0A0B4J245 112 aa12.18□□□□□ -0.46
SLC6A8-201ENST00000253122 A4D1N5 150 aa12.18□□□□□ -0.46
SLC6A8-201ENST00000253122 TRBV7-3A0A075B6L6 115 aa12.17□□□□□ -0.46
SLC6A8-201ENST00000253122 M0R1W7 72 aa12.17□□□□□ -0.46
SLC6A8-201ENST00000253122 TRPT1Q86TN4 253 aaKnown RBP12.17□□□□□ -0.46
SLC6A8-201ENST00000253122 PIFOQ8TCI5 191 aa12.17□□□□□ -0.46
SLC6A8-201ENST00000253122 ZMAT4Q9H898 229 aa12.17□□□□□ -0.46
SLC6A8-201ENST00000253122 POLQO75417 2590 aa12.17□□□□□ -0.46
SLC6A8-201ENST00000253122 IGHV3-73A0A0B4J1V6 119 aa12.17□□□□□ -0.46
SLC6A8-201ENST00000253122 NRACQ8N912 160 aa12.17□□□□□ -0.46
SLC6A8-201ENST00000253122 NPBQ8NG41 125 aa12.17□□□□□ -0.46
SLC6A8-201ENST00000253122 GRNP28799 593 aaKnown RBP12.17□□□□□ -0.46
SLC6A8-201ENST00000253122 C10orf126Q8N4M7 172 aa12.17□□□□□ -0.46
SLC6A8-201ENST00000253122 TOMM6Q96B49 74 aa12.17□□□□□ -0.46
SLC6A8-201ENST00000253122 SAA4P35542 130 aa12.16□□□□□ -0.46
SLC6A8-201ENST00000253122 ATXN8Q156A1 80 aa12.16□□□□□ -0.46
SLC6A8-201ENST00000253122 TMEM95Q3KNT9 176 aa12.16□□□□□ -0.46
SLC6A8-201ENST00000253122 NDUFA11Q86Y39 141 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms