RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 LYNX1G3V0Z9 82 aa14.09□□□□□ -0.15
PTPN12-201ENST00000248594 LYNX1P0DP58 116 aa14.09□□□□□ -0.15
PTPN12-201ENST00000248594 MDS2Q8NDY4 140 aa14.09□□□□□ -0.15
PTPN12-201ENST00000248594 NRACQ8N912 160 aa14.08□□□□□ -0.16
PTPN12-201ENST00000248594 A0A0J9YY99 117 aa14.08□□□□□ -0.16
PTPN12-201ENST00000248594 LGALS3P17931 250 aaKnown RBP14.08□□□□□ -0.16
PTPN12-201ENST00000248594 TIMD4Q96H15 378 aa14.08□□□□□ -0.16
PTPN12-201ENST00000248594 C21orf62Q9NYP8 219 aa14.08□□□□□ -0.16
PTPN12-201ENST00000248594 SLC25A15Q9Y619 301 aa14.08□□□□□ -0.16
PTPN12-201ENST00000248594 LINC00694P0DN24 101 aa14.07□□□□□ -0.16
PTPN12-201ENST00000248594 TRBV6-1A0A0K0K1D8 114 aa14.07□□□□□ -0.16
PTPN12-201ENST00000248594 OR10J6PQ8NGY7 276 aa14.07□□□□□ -0.16
PTPN12-201ENST00000248594 OOSP1A8MZH6 123 aa14.06□□□□□ -0.16
PTPN12-201ENST00000248594 CEACAM4O75871 244 aa14.06□□□□□ -0.16
PTPN12-201ENST00000248594 ZNF474Q6S9Z5 364 aaPredicted RBP14.06□□□□□ -0.16
PTPN12-201ENST00000248594 SORL1Q92673 2214 aa14.06□□□□□ -0.16
PTPN12-201ENST00000248594 FAM236AA0A1B0GUQ0 79 aa14.06□□□□□ -0.16
PTPN12-201ENST00000248594 FAM236BA0A1B0GV22 79 aa14.06□□□□□ -0.16
PTPN12-201ENST00000248594 F5H697 171 aa14.06□□□□□ -0.16
PTPN12-201ENST00000248594 H3BMM0 161 aa14.06□□□□□ -0.16
PTPN12-201ENST00000248594 RS1O15537 224 aa14.06□□□□□ -0.16
PTPN12-201ENST00000248594 IGLV1-44P01699 117 aa14.06□□□□□ -0.16
PTPN12-201ENST00000248594 SUMO2P61956 95 aaKnown RBP14.06□□□□□ -0.16
PTPN12-201ENST00000248594 RPL39P62891 51 aaKnown RBP14.06□□□□□ -0.16
PTPN12-201ENST00000248594 C9orf153Q5TBE3 101 aa14.06□□□□□ -0.16
PTPN12-201ENST00000248594 PVRIGQ6DKI7 326 aa14.06□□□□□ -0.16
PTPN12-201ENST00000248594 UBE2WQ96B02 151 aa14.06□□□□□ -0.16
PTPN12-201ENST00000248594 ODF3Q96PU9 254 aa14.06□□□□□ -0.16
PTPN12-201ENST00000248594 TRAV12-3A0A0B4J271 114 aa14.05□□□□□ -0.16
PTPN12-201ENST00000248594 ASIPP42127 132 aa14.05□□□□□ -0.16
PTPN12-201ENST00000248594 TSPEAR-AS2P59090 65 aa14.05□□□□□ -0.16
PTPN12-201ENST00000248594 DEFB1P60022 68 aa14.05□□□□□ -0.16
PTPN12-201ENST00000248594 C2CD3Q4AC94 2353 aa14.05□□□□□ -0.16
PTPN12-201ENST00000248594 IGHV1-3A0A0C4DH29 117 aa14.05□□□□□ -0.16
PTPN12-201ENST00000248594 LINC01620Q4KN68 170 aa14.05□□□□□ -0.16
PTPN12-201ENST00000248594 CUL9Q8IWT3 2517 aa14.05□□□□□ -0.16
PTPN12-201ENST00000248594 NEXN-AS1Q8NBZ9 246 aa14.04□□□□□ -0.16
PTPN12-201ENST00000248594 CENPVL3A0A0U1RRI6 287 aa14.03□□□□□ -0.16
PTPN12-201ENST00000248594 IGHV1-8P0DP01 117 aa14.03□□□□□ -0.16
PTPN12-201ENST00000248594 MFAP4P55083 255 aa14.03□□□□□ -0.16
PTPN12-201ENST00000248594 ORMDL2Q53FV1 153 aa14.03□□□□□ -0.16
PTPN12-201ENST00000248594 ZFHX3Q15911 3703 aa14.03□□□□□ -0.16
PTPN12-201ENST00000248594 PMVKQ15126 192 aa14.03□□□□□ -0.16
PTPN12-201ENST00000248594 Q6ZS92 163 aa14.03□□□□□ -0.16
PTPN12-201ENST00000248594 TP53TG1Q9Y2A0 90 aa14.03□□□□□ -0.16
PTPN12-201ENST00000248594 LINC01559Q495D7 138 aa14.03□□□□□ -0.16
PTPN12-201ENST00000248594 TEX36Q5VZQ5 186 aa14.03□□□□□ -0.16
PTPN12-201ENST00000248594 OPRPNQ99935 248 aaPredicted RBP14.02□□□□□ -0.16
PTPN12-201ENST00000248594 MUSTN1Q8IVN3 82 aa14.02□□□□□ -0.17
PTPN12-201ENST00000248594 AGPAT4-IT1Q9H0P7 198 aa14.02□□□□□ -0.17
PTPN12-201ENST00000248594 TRGV11A0A075B6L2 103 aa14.02□□□□□ -0.17
PTPN12-201ENST00000248594 Q6ZSV7 163 aa14.02□□□□□ -0.17
PTPN12-201ENST00000248594 ZNF575Q86XF7 245 aa14.02□□□□□ -0.17
PTPN12-201ENST00000248594 DEFB124Q8NES8 71 aa14.02□□□□□ -0.17
PTPN12-201ENST00000248594 TIMM23O14925 209 aa14.01□□□□□ -0.17
PTPN12-201ENST00000248594 IGHV3-30P01768 117 aa14.01□□□□□ -0.17
PTPN12-201ENST00000248594 IGF1P05019 195 aa14.01□□□□□ -0.17
PTPN12-201ENST00000248594 IGHV3-30-5P0DP03 117 aa14.01□□□□□ -0.17
PTPN12-201ENST00000248594 CLEC2BQ92478 149 aa14.01□□□□□ -0.17
PTPN12-201ENST00000248594 PHLDA3Q9Y5J5 127 aa14.01□□□□□ -0.17
PTPN12-201ENST00000248594 ATXN8Q156A1 80 aa14.01□□□□□ -0.17
PTPN12-201ENST00000248594 MUC6Q6W4X9 2439 aa14.01□□□□□ -0.17
PTPN12-201ENST00000248594 LY6HO94772 140 aa14□□□□□ -0.17
PTPN12-201ENST00000248594 ZNF22P17026 224 aaPredicted RBP14□□□□□ -0.17
PTPN12-201ENST00000248594 PDE6HQ13956 83 aa14□□□□□ -0.17
PTPN12-201ENST00000248594 DYNLRB1Q9NP97 96 aa14□□□□□ -0.17
PTPN12-201ENST00000248594 ZNF256Q9Y2P7 627 aaPredicted RBP14□□□□□ -0.17
PTPN12-201ENST00000248594 CENPEQ02224 2701 aa14□□□□□ -0.17
PTPN12-201ENST00000248594 TRAV8-3A0A0A6YYJ7 113 aa14□□□□□ -0.17
PTPN12-201ENST00000248594 SMAD5-AS1Q9Y6J3 95 aa14□□□□□ -0.17
PTPN12-201ENST00000248594 CEMP1Q6PRD7 247 aaPredicted RBP14□□□□□ -0.17
PTPN12-201ENST00000248594 EEF1AKMT3Q96AZ1 226 aa14□□□□□ -0.17
PTPN12-201ENST00000248594 LOXP28300 417 aaPredicted RBP13.99□□□□□ -0.17
PTPN12-201ENST00000248594 NDPQ00604 133 aa13.99□□□□□ -0.17
PTPN12-201ENST00000248594 C5orf47Q569G3 176 aa13.99□□□□□ -0.17
PTPN12-201ENST00000248594 TRAV12-1A0A0B4J245 112 aa13.99□□□□□ -0.17
PTPN12-201ENST00000248594 CD59P13987 128 aa13.99□□□□□ -0.17
PTPN12-201ENST00000248594 J3QQQ9 107 aa13.99□□□□□ -0.17
PTPN12-201ENST00000248594 IGHV3-33P01772 117 aa13.99□□□□□ -0.17
PTPN12-201ENST00000248594 EDA2RQ9HAV5 297 aa13.99□□□□□ -0.17
PTPN12-201ENST00000248594 CDX4O14627 284 aaPredicted RBP13.98□□□□□ -0.17
PTPN12-201ENST00000248594 FAM74A4Q5TZK3 123 aa13.98□□□□□ -0.17
PTPN12-201ENST00000248594 TOMM6Q96B49 74 aa13.98□□□□□ -0.17
PTPN12-201ENST00000248594 RPL11P62913 178 aaKnown RBP13.98□□□□□ -0.17
PTPN12-201ENST00000248594 C1orf162Q8NEQ5 155 aaPredicted RBP13.98□□□□□ -0.17
PTPN12-201ENST00000248594 SETD2Q9BYW2 2564 aaPredicted RBP13.98□□□□□ -0.17
PTPN12-201ENST00000248594 SPTBN4Q9H254 2564 aa13.98□□□□□ -0.17
PTPN12-201ENST00000248594 NACAE9PAV3 2078 aa13.97□□□□□ -0.17
PTPN12-201ENST00000248594 CSPG4Q6UVK1 2322 aa13.97□□□□□ -0.17
PTPN12-201ENST00000248594 IGHG4P01861 327 aa13.97□□□□□ -0.17
PTPN12-201ENST00000248594 ZNF580Q9UK33 172 aa13.97□□□□□ -0.17
PTPN12-201ENST00000248594 LINC00574Q9H8X3 128 aa13.96□□□□□ -0.17
PTPN12-201ENST00000248594 TRAV41A0A0B4J266 112 aa13.96□□□□□ -0.17
PTPN12-201ENST00000248594 RBAKDNA6NC62 111 aa13.96□□□□□ -0.17
PTPN12-201ENST00000248594 COX6B1P14854 86 aa13.96□□□□□ -0.17
PTPN12-201ENST00000248594 TMEM30BQ3MIR4 351 aa13.96□□□□□ -0.17
PTPN12-201ENST00000248594 SEM1Q6ZVN7 128 aa13.96□□□□□ -0.17
PTPN12-201ENST00000248594 DKK4Q9UBT3 224 aa13.96□□□□□ -0.17
PTPN12-201ENST00000248594 CSDC2Q9Y534 153 aaKnown RBP13.96□□□□□ -0.17
PTPN12-201ENST00000248594 A0A0U1RRA0 63 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms