RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 TMEM18Q96B42 140 aa10.42□□□□□ -0.74
SDF2-201ENST00000247020 MSRB1Q9NZV6 116 aa10.42□□□□□ -0.74
SDF2-201ENST00000247020 LAMTOR2Q9Y2Q5 125 aa10.42□□□□□ -0.74
SDF2-201ENST00000247020 TEP1Q99973 2627 aaKnown RBP10.41□□□□□ -0.74
SDF2-201ENST00000247020 IFITM10A6NMD0 228 aa10.41□□□□□ -0.74
SDF2-201ENST00000247020 SERF1AO75920 110 aa10.41□□□□□ -0.74
SDF2-201ENST00000247020 RAB4AP20338 218 aa10.41□□□□□ -0.74
SDF2-201ENST00000247020 MRPL51Q4U2R6 128 aaKnown RBP10.41□□□□□ -0.74
SDF2-201ENST00000247020 MORN3Q6PF18 240 aaPredicted RBP10.41□□□□□ -0.74
SDF2-201ENST00000247020 SHISA2Q6UWI4 295 aa10.41□□□□□ -0.74
SDF2-201ENST00000247020 GTSCR1Q86UQ5 136 aa10.41□□□□□ -0.74
SDF2-201ENST00000247020 Q8N1Y9 231 aa10.41□□□□□ -0.74
SDF2-201ENST00000247020 RBMY1A1P0DJD3 496 aaKnown RBP10.4□□□□□ -0.74
SDF2-201ENST00000247020 RBMY1CP0DJD4 496 aa10.4□□□□□ -0.74
SDF2-201ENST00000247020 AKR1D1P51857 326 aa10.4□□□□□ -0.74
SDF2-201ENST00000247020 FXYD7P58549 80 aa10.4□□□□□ -0.74
SDF2-201ENST00000247020 LINC00310P59036 64 aa10.4□□□□□ -0.74
SDF2-201ENST00000247020 RBMY1FQ15415 496 aaKnown RBP10.4□□□□□ -0.74
SDF2-201ENST00000247020 PRIMA1Q86XR5 153 aa10.4□□□□□ -0.74
SDF2-201ENST00000247020 RNF185Q96GF1 192 aa10.4□□□□□ -0.74
SDF2-201ENST00000247020 AP1S3Q96PC3 154 aa10.4□□□□□ -0.74
SDF2-201ENST00000247020 HIST1H2BLQ99880 126 aa10.4□□□□□ -0.74
SDF2-201ENST00000247020 C1QTNF4Q9BXJ3 329 aa10.4□□□□□ -0.74
SDF2-201ENST00000247020 NIPBLQ6KC79 2804 aaeCLIP10.4□□□□□ -0.74
SDF2-201ENST00000247020 SSTP61278 116 aa10.39□□□□□ -0.75
SDF2-201ENST00000247020 PIK3CD-AS1Q5SR53 167 aa10.39□□□□□ -0.75
SDF2-201ENST00000247020 SYT8Q8NBV8 401 aa10.39□□□□□ -0.75
SDF2-201ENST00000247020 DPH3P1Q9H4G8 78 aa10.39□□□□□ -0.75
SDF2-201ENST00000247020 CBY3A6NI87 242 aa10.39□□□□□ -0.75
SDF2-201ENST00000247020 D6R8Y8 96 aa10.39□□□□□ -0.75
SDF2-201ENST00000247020 M0R381 172 aa10.39□□□□□ -0.75
SDF2-201ENST00000247020 FABP4P15090 132 aa10.39□□□□□ -0.75
SDF2-201ENST00000247020 CKS2P33552 79 aa10.39□□□□□ -0.75
SDF2-201ENST00000247020 PDZD11Q5EBL8 140 aa10.39□□□□□ -0.75
SDF2-201ENST00000247020 PTH2Q96A98 100 aa10.39□□□□□ -0.75
SDF2-201ENST00000247020 CHCHD1Q96BP2 118 aaKnown RBP10.39□□□□□ -0.75
SDF2-201ENST00000247020 PRELID3AQ96N28 172 aa10.39□□□□□ -0.75
SDF2-201ENST00000247020 TIMM8BQ9Y5J9 83 aaPredicted RBP10.39□□□□□ -0.75
SDF2-201ENST00000247020 MUC4Q99102 2169 aa10.38□□□□□ -0.75
SDF2-201ENST00000247020 EVI2AP22794 236 aa10.38□□□□□ -0.75
SDF2-201ENST00000247020 ZNF415Q09FC8 603 aa10.38□□□□□ -0.75
SDF2-201ENST00000247020 IQCJQ1A5X6 159 aa10.38□□□□□ -0.75
SDF2-201ENST00000247020 C12orf54Q6X4T0 127 aa10.38□□□□□ -0.75
SDF2-201ENST00000247020 C3orf56Q8N813 242 aa10.38□□□□□ -0.75
SDF2-201ENST00000247020 MRAP2Q96G30 205 aa10.38□□□□□ -0.75
SDF2-201ENST00000247020 RCHY1Q96PM5 261 aa10.38□□□□□ -0.75
SDF2-201ENST00000247020 POM121L12Q8N7R1 296 aa10.37□□□□□ -0.75
SDF2-201ENST00000247020 LINC01587Q99440 93 aa10.37□□□□□ -0.75
SDF2-201ENST00000247020 GSN-AS1Q9NRJ2 163 aa10.37□□□□□ -0.75
SDF2-201ENST00000247020 MDFICQ9P1T7 246 aa10.37□□□□□ -0.75
SDF2-201ENST00000247020 NUPR1O60356 82 aa10.36□□□□□ -0.75
SDF2-201ENST00000247020 SMIM6P0DI80 62 aa10.36□□□□□ -0.75
SDF2-201ENST00000247020 PMCHP20382 165 aa10.36□□□□□ -0.75
SDF2-201ENST00000247020 SPXQ9BT56 116 aa10.36□□□□□ -0.75
SDF2-201ENST00000247020 NDUFAF3Q9BU61 184 aa10.36□□□□□ -0.75
SDF2-201ENST00000247020 JMJD1CQ15652 2540 aa10.36□□□□□ -0.75
SDF2-201ENST00000247020 PRR31Q5SQ13 230 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 NIT1Q86X76 327 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 DEFB125Q8N687 156 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 OR10D4PQ8NGN7 298 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 SPATA3Q8NHX4 192 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 SAMD10Q9BYL1 202 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 XCL2Q9UBD3 114 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 GOLT1BQ9Y3E0 138 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 TENM1Q9UKZ4 2725 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 ATRQ13535 2644 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 PRSS47A8MTI9 375 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 HSBP1O75506 76 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 PPP1R17O96001 155 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 LINC00614P0C842 121 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 SMIM17P0DL12 118 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 C1orf158Q8N1D5 194 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 TMEM208Q9BTX3 173 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 WFDC10AQ9H1F0 79 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 KIF25-AS1Q9Y6Z4 181 aa10.35□□□□□ -0.75
SDF2-201ENST00000247020 URB1-AS1Q96HZ7 61 aa10.34□□□□□ -0.75
SDF2-201ENST00000247020 MAP1LC3AQ9H492 121 aa10.34□□□□□ -0.75
SDF2-201ENST00000247020 M0R2P5 195 aa10.33□□□□□ -0.76
SDF2-201ENST00000247020 NPYP01303 97 aa10.33□□□□□ -0.76
SDF2-201ENST00000247020 GIG44P09565 113 aaPredicted RBP10.33□□□□□ -0.76
SDF2-201ENST00000247020 IGLL1P15814 213 aa10.33□□□□□ -0.76
SDF2-201ENST00000247020 AMTP48728 403 aa10.33□□□□□ -0.76
SDF2-201ENST00000247020 RNASEKQ6P5S7 137 aaKnown RBP10.33□□□□□ -0.76
SDF2-201ENST00000247020 LINC00518Q8N0U6 118 aa10.33□□□□□ -0.76
SDF2-201ENST00000247020 C14orf178Q8N769 122 aaPredicted RBP10.33□□□□□ -0.76
SDF2-201ENST00000247020 C11orf72Q8NBR9 251 aa10.33□□□□□ -0.76
SDF2-201ENST00000247020 TNFRSF6BO95407 300 aa10.32□□□□□ -0.76
SDF2-201ENST00000247020 PRSS3P2Q8NHM4 247 aa10.32□□□□□ -0.76
SDF2-201ENST00000247020 AP5S1Q9NUS5 200 aa10.32□□□□□ -0.76
SDF2-201ENST00000247020 ZMAT5Q9UDW3 170 aaKnown RBP10.32□□□□□ -0.76
SDF2-201ENST00000247020 LINC01546A6NGU7 62 aa10.31□□□□□ -0.76
SDF2-201ENST00000247020 SMKR1H3BMG3 65 aa10.31□□□□□ -0.76
SDF2-201ENST00000247020 NCR2O95944 276 aa10.31□□□□□ -0.76
SDF2-201ENST00000247020 RPL35AP18077 110 aaKnown RBP10.31□□□□□ -0.76
SDF2-201ENST00000247020 LINC00315P59091 139 aa10.31□□□□□ -0.76
SDF2-201ENST00000247020 ZNF876PQ49A33 203 aa10.31□□□□□ -0.76
SDF2-201ENST00000247020 FA2HQ7L5A8 372 aa10.31□□□□□ -0.76
SDF2-201ENST00000247020 NRACQ8N912 160 aa10.31□□□□□ -0.76
SDF2-201ENST00000247020 CSNK1G2-AS1Q8NCQ2 148 aa10.31□□□□□ -0.76
SDF2-201ENST00000247020 IL17DQ8TAD2 202 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms