RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 ZC2HC1AQ96GY0 325 aa6.13□□□□□ -1.43
NANOG-201ENST00000229307 C17orf77Q96MU5 243 aa6.13□□□□□ -1.43
NANOG-201ENST00000229307 PIEZO2Q9H5I5 2752 aa6.13□□□□□ -1.43
NANOG-201ENST00000229307 HLA-DRB4P13762 266 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 HLA-DMBP28068 263 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 S100A7L2Q5SY68 101 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 HIST3H2BBQ8N257 126 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 DEFB125Q8N687 156 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 C11orf45Q8TAV5 145 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 RNASE8Q8TDE3 154 aaKnown RBP6.12□□□□□ -1.43
NANOG-201ENST00000229307 HLA-DRB4X5D2U9 266 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 CHD3Q12873 2000 aaKnown RBP6.12□□□□□ -1.43
NANOG-201ENST00000229307 SDHAF1A6NFY7 115 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 SERF1AO75920 110 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 TRBV12-3P01733 135 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 TM2D2Q9BX73 214 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 C16orf95Q9H693 158 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 UNC80Q8N2C7 3258 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 PSMB8P28062 276 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 GAGE6Q13070 117 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 ZNF726P1Q15940 193 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 PTPN13Q12923 2485 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 CDH23Q9H251 3354 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 LINC01548A6NM66 108 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 UNQ9165/PRO28630Q6UXU0 137 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 ODF3Q96PU9 254 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 SMR3AQ99954 134 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 MYO18BQ8IUG5 2567 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 ANGP03950 147 aaKnown RBP6.12□□□□□ -1.43
NANOG-201ENST00000229307 Q8N8P6 123 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 C20orf78Q9BR46 151 aa6.12□□□□□ -1.43
NANOG-201ENST00000229307 LOC107984156A0A0G2JMH3 177 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 A0A0J9YX75 114 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 K7EQD1 137 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 ARL17AQ8IVW1 177 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 TMEM263Q8WUH6 116 aaKnown RBP6.11□□□□□ -1.43
NANOG-201ENST00000229307 MYMXA0A1B0GTQ4 84 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 FAM19A2Q8N3H0 131 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 ATP6V0E2Q8NHE4 81 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 GYPEP15421 78 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 TMEM213A2RRL7 107 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 HIST1H2BKO60814 126 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 HIST1H2BJP06899 126 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 MED14OSP0DP75 135 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 HIST1H2BOP23527 126 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 HIST1H2BBP33778 126 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 HIST1H2BDP58876 126 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 HIST1H2BCP62807 126 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 RPL24P83731 157 aaKnown RBP6.11□□□□□ -1.43
NANOG-201ENST00000229307 HIST2H2BEQ16778 126 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.11□□□□□ -1.43
NANOG-201ENST00000229307 HIST1H2BHQ93079 126 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 HIST1H2BNQ99877 126 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 HIST1H2BMQ99879 126 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 C1orf43Q9BWL3 253 aa6.11□□□□□ -1.43
NANOG-201ENST00000229307 C11orf68Q9H3H3 251 aaKnown RBP6.11□□□□□ -1.43
NANOG-201ENST00000229307 MED13LQ71F56 2210 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 FLNBO75369 2602 aaKnown RBP6.1□□□□□ -1.43
NANOG-201ENST00000229307 PLCE1Q9P212 2302 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 E7EUB6 86 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 SPG11Q96JI7 2443 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 IGKV2D-24A0A075B6R9 120 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 LYRM9A8MSI8 78 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 GNRH2O43555 120 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 DAZ2Q13117 558 aaKnown RBP6.1□□□□□ -1.43
NANOG-201ENST00000229307 PATE2Q6UY27 113 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 DAZ4Q86SG3 579 aaKnown RBP6.1□□□□□ -1.43
NANOG-201ENST00000229307 HIST1H2BLQ99880 126 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 JPT2Q9H910 190 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 DAZ3Q9NR90 486 aaKnown RBP6.1□□□□□ -1.43
NANOG-201ENST00000229307 SIGLEC8Q9NYZ4 499 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 NAV2Q8IVL1 2488 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 A0A1W2PPR1 153 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 P0C879 139 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 Q6ZWC4 215 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 A0A096LPF7 62 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 FABP2P12104 132 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 CRIP3Q6Q6R5 217 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 ADAMTSL5Q6ZMM2 481 aa6.1□□□□□ -1.43
NANOG-201ENST00000229307 K7EMI3 77 aa6.09□□□□□ -1.43
NANOG-201ENST00000229307 MIFP14174 115 aa6.09□□□□□ -1.43
NANOG-201ENST00000229307 PAX2Q02962 417 aa6.09□□□□□ -1.43
NANOG-201ENST00000229307 TP53TG1Q9Y2A0 90 aa6.09□□□□□ -1.43
NANOG-201ENST00000229307 C5orf42Q9H799 3197 aa6.09□□□□□ -1.43
NANOG-201ENST00000229307 SMKR1H3BMG3 65 aa6.09□□□□□ -1.43
NANOG-201ENST00000229307 TIMM21Q9BVV7 248 aa6.09□□□□□ -1.43
NANOG-201ENST00000229307 NCOA6Q14686 2063 aaPredicted RBP6.09□□□□□ -1.43
NANOG-201ENST00000229307 ZNF815PA8K554 130 aa6.09□□□□□ -1.43
NANOG-201ENST00000229307 AVPP01185 164 aa6.09□□□□□ -1.43
NANOG-201ENST00000229307 IGLV1-40P01703 118 aa6.09□□□□□ -1.43
NANOG-201ENST00000229307 NEGR1Q7Z3B1 354 aa6.09□□□□□ -1.43
NANOG-201ENST00000229307 HHLA3Q9XRX5 114 aa6.09□□□□□ -1.43
NANOG-201ENST00000229307 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.09□□□□□ -1.44
NANOG-201ENST00000229307 SMIM27A0A1W2PRY6 76 aa6.09□□□□□ -1.44
NANOG-201ENST00000229307 K7EQG2 157 aa6.09□□□□□ -1.44
NANOG-201ENST00000229307 SMIM13P0DJ93 91 aa6.09□□□□□ -1.44
NANOG-201ENST00000229307 EIF4EBP1Q13541 118 aaPredicted RBP6.09□□□□□ -1.44
NANOG-201ENST00000229307 ATOH7Q8N100 152 aa6.09□□□□□ -1.44
NANOG-201ENST00000229307 IGHV3-38A0A0C4DH36 116 aa6.08□□□□□ -1.44
NANOG-201ENST00000229307 IGLL5B9A064 214 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms