RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 TM2D2Q9BX73 214 aa12.28□□□□□ -0.44
LTBR-201ENST00000228918 F8VRH5 84 aa12.28□□□□□ -0.44
LTBR-201ENST00000228918 PF4V1P10720 104 aa12.28□□□□□ -0.44
LTBR-201ENST00000228918 RNASE4P34096 147 aaKnown RBP12.28□□□□□ -0.44
LTBR-201ENST00000228918 RPL11P62913 178 aaKnown RBP12.28□□□□□ -0.44
LTBR-201ENST00000228918 CEND1Q8N111 149 aa12.28□□□□□ -0.44
LTBR-201ENST00000228918 MAPKAPK5-AS1Q8N8E1 139 aa12.28□□□□□ -0.44
LTBR-201ENST00000228918 TRBV7-9A0A0J9YWB2 115 aa12.27□□□□□ -0.44
LTBR-201ENST00000228918 RNF223E7ERA6 249 aa12.27□□□□□ -0.44
LTBR-201ENST00000228918 H7C1H1 209 aa12.27□□□□□ -0.44
LTBR-201ENST00000228918 K7EMI3 77 aa12.27□□□□□ -0.44
LTBR-201ENST00000228918 SMAGPQ0VAQ4 97 aa12.27□□□□□ -0.44
LTBR-201ENST00000228918 CD300EQ496F6 205 aaPredicted RBP12.27□□□□□ -0.44
LTBR-201ENST00000228918 RHPN1-AS1Q9BWJ2 59 aa12.27□□□□□ -0.44
LTBR-201ENST00000228918 RNASE3P12724 160 aaKnown RBP12.27□□□□□ -0.45
LTBR-201ENST00000228918 BLCAPP62952 87 aa12.27□□□□□ -0.45
LTBR-201ENST00000228918 FOXI2Q6ZQN5 318 aa12.27□□□□□ -0.45
LTBR-201ENST00000228918 PHLDA1Q8WV24 401 aaPredicted RBP12.27□□□□□ -0.45
LTBR-201ENST00000228918 A0A1B0GV72 72 aa12.26□□□□□ -0.45
LTBR-201ENST00000228918 K7ERJ3 54 aa12.26□□□□□ -0.45
LTBR-201ENST00000228918 MGPP08493 103 aa12.26□□□□□ -0.45
LTBR-201ENST00000228918 Q6ZS46 218 aa12.26□□□□□ -0.45
LTBR-201ENST00000228918 LCNL1Q6ZST4 164 aa12.26□□□□□ -0.45
LTBR-201ENST00000228918 SCGB3A1Q96QR1 104 aa12.26□□□□□ -0.45
LTBR-201ENST00000228918 CCL19Q99731 98 aa12.26□□□□□ -0.45
LTBR-201ENST00000228918 IGKV3-7A0A075B6H7 116 aa12.26□□□□□ -0.45
LTBR-201ENST00000228918 GAGE12HA6NDE8 117 aa12.26□□□□□ -0.45
LTBR-201ENST00000228918 GNRH2O43555 120 aa12.26□□□□□ -0.45
LTBR-201ENST00000228918 IGLV1-40P01703 118 aa12.26□□□□□ -0.45
LTBR-201ENST00000228918 NEXN-AS1Q8NBZ9 246 aa12.25□□□□□ -0.45
LTBR-201ENST00000228918 CLUHP3Q96NS8 147 aa12.25□□□□□ -0.45
LTBR-201ENST00000228918 DAZ1Q9NQZ3 744 aaKnown RBP12.25□□□□□ -0.45
LTBR-201ENST00000228918 NXPH4O95158 308 aa12.25□□□□□ -0.45
LTBR-201ENST00000228918 TAL2Q16559 108 aa12.25□□□□□ -0.45
LTBR-201ENST00000228918 SPATA25Q9BR10 227 aa12.25□□□□□ -0.45
LTBR-201ENST00000228918 SPANXB1Q9NS25 103 aaPredicted RBP12.25□□□□□ -0.45
LTBR-201ENST00000228918 NHP2Q9NX24 153 aaKnown RBP12.25□□□□□ -0.45
LTBR-201ENST00000228918 TSSC4Q9Y5U2 329 aaPredicted RBP12.25□□□□□ -0.45
LTBR-201ENST00000228918 MUC4Q99102 2169 aa12.24□□□□□ -0.45
LTBR-201ENST00000228918 TMEM238LA0A1B0GVL6 79 aa12.24□□□□□ -0.45
LTBR-201ENST00000228918 POM121L12Q8N7R1 296 aa12.24□□□□□ -0.45
LTBR-201ENST00000228918 CFHR3Q02985 330 aa12.23□□□□□ -0.45
LTBR-201ENST00000228918 C2orf66Q6UXQ4 117 aa12.23□□□□□ -0.45
LTBR-201ENST00000228918 IGHV4-30-2A0A087WSY4 118 aa12.23□□□□□ -0.45
LTBR-201ENST00000228918 F8W1H4 67 aa12.23□□□□□ -0.45
LTBR-201ENST00000228918 CACNA1AO00555 2505 aa12.23□□□□□ -0.45
LTBR-201ENST00000228918 AGRNO00468 2067 aa12.23□□□□□ -0.45
LTBR-201ENST00000228918 KLLNB2CW77 178 aa12.22□□□□□ -0.45
LTBR-201ENST00000228918 PPP1R17O96001 155 aa12.22□□□□□ -0.45
LTBR-201ENST00000228918 EDN2P20800 178 aa12.22□□□□□ -0.45
LTBR-201ENST00000228918 BAALCQ8WXS3 180 aa12.22□□□□□ -0.45
LTBR-201ENST00000228918 E9PLD3 99 aa12.22□□□□□ -0.45
LTBR-201ENST00000228918 J3QR89 54 aa12.22□□□□□ -0.45
LTBR-201ENST00000228918 MSMBP08118 114 aa12.22□□□□□ -0.45
LTBR-201ENST00000228918 KIF25-AS1Q9Y6Z4 181 aa12.22□□□□□ -0.45
LTBR-201ENST00000228918 OR11H12B2RN74 326 aa12.21□□□□□ -0.45
LTBR-201ENST00000228918 SRD5A1P18405 259 aa12.21□□□□□ -0.45
LTBR-201ENST00000228918 OR11H1Q8NG94 326 aa12.21□□□□□ -0.45
LTBR-201ENST00000228918 OR11H2Q8NH07 326 aa12.21□□□□□ -0.45
LTBR-201ENST00000228918 LINC01619G3V211 115 aa12.21□□□□□ -0.46
LTBR-201ENST00000228918 ATP5J2P56134 94 aa12.21□□□□□ -0.46
LTBR-201ENST00000228918 LINC00315P59091 139 aa12.21□□□□□ -0.46
LTBR-201ENST00000228918 WFDC2Q14508 124 aa12.21□□□□□ -0.46
LTBR-201ENST00000228918 TRBV7-3A0A075B6L6 115 aa12.2□□□□□ -0.46
LTBR-201ENST00000228918 K7EMT4 169 aa12.2□□□□□ -0.46
LTBR-201ENST00000228918 MYMXA0A1B0GTQ4 84 aa12.2□□□□□ -0.46
LTBR-201ENST00000228918 DCANP1Q8TF63 244 aa12.2□□□□□ -0.46
LTBR-201ENST00000228918 HIST1H4GQ99525 98 aa12.2□□□□□ -0.46
LTBR-201ENST00000228918 IGHV4OR15-8A0A075B7B6 117 aa12.18□□□□□ -0.46
LTBR-201ENST00000228918 A0A087WW49 117 aa12.18□□□□□ -0.46
LTBR-201ENST00000228918 PRSS29PA6NIE9 313 aa12.18□□□□□ -0.46
LTBR-201ENST00000228918 IGLL5B9A064 214 aa12.18□□□□□ -0.46
LTBR-201ENST00000228918 ID1P41134 155 aa12.18□□□□□ -0.46
LTBR-201ENST00000228918 RPL32P62910 135 aaKnown RBP12.18□□□□□ -0.46
LTBR-201ENST00000228918 FAM159AQ6UWV7 190 aa12.18□□□□□ -0.46
LTBR-201ENST00000228918 SPAG8Q99932 426 aaPredicted RBP12.18□□□□□ -0.46
LTBR-201ENST00000228918 AVPP01185 164 aa12.18□□□□□ -0.46
LTBR-201ENST00000228918 C12orf74Q32Q52 190 aa12.18□□□□□ -0.46
LTBR-201ENST00000228918 TMEM95Q3KNT9 176 aa12.18□□□□□ -0.46
LTBR-201ENST00000228918 ZNF580Q9UK33 172 aa12.18□□□□□ -0.46
LTBR-201ENST00000228918 DUSP14O95147 198 aaKnown RBP12.17□□□□□ -0.46
LTBR-201ENST00000228918 TCTEX1D4Q5JR98 221 aa12.17□□□□□ -0.46
LTBR-201ENST00000228918 SUMO4Q6EEV6 95 aa12.16□□□□□ -0.46
LTBR-201ENST00000228918 PRADC1Q9BSG0 188 aa12.16□□□□□ -0.46
LTBR-201ENST00000228918 JPT2Q9H910 190 aa12.16□□□□□ -0.46
LTBR-201ENST00000228918 CYSLTR1Q9Y271 337 aa12.16□□□□□ -0.46
LTBR-201ENST00000228918 LGALS1P09382 135 aaKnown RBP12.16□□□□□ -0.46
LTBR-201ENST00000228918 PSMB8P28062 276 aa12.16□□□□□ -0.46
LTBR-201ENST00000228918 POLR2KP53803 58 aaKnown RBP12.16□□□□□ -0.46
LTBR-201ENST00000228918 CKS1BP61024 79 aa12.16□□□□□ -0.46
LTBR-201ENST00000228918 SH2D6Q7Z4S9 175 aa12.16□□□□□ -0.46
LTBR-201ENST00000228918 ZNF479Q96JC4 524 aa12.16□□□□□ -0.46
LTBR-201ENST00000228918 COL12A1Q99715 3063 aa12.15□□□□□ -0.46
LTBR-201ENST00000228918 TRAV12-3A0A0B4J271 114 aa12.15□□□□□ -0.46
LTBR-201ENST00000228918 TSHBP01222 138 aa12.15□□□□□ -0.46
LTBR-201ENST00000228918 CRYGDP07320 174 aa12.15□□□□□ -0.46
LTBR-201ENST00000228918 ETDBQ3ZM63 59 aa12.15□□□□□ -0.46
LTBR-201ENST00000228918 WFDC12Q8WWY7 111 aa12.15□□□□□ -0.46
LTBR-201ENST00000228918 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.15□□□□□ -0.466e-7■■■□□ 17.1
LTBR-201ENST00000228918 A0A1B0GWB2 263 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms