RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 MT-ATP8P03928 68 aa10.61□□□□□ -0.71
SCNN1A-201ENST00000228916 NDUFA11Q86Y39 141 aa10.61□□□□□ -0.71
SCNN1A-201ENST00000228916 SBSPONQ8IVN8 264 aa10.61□□□□□ -0.71
SCNN1A-201ENST00000228916 ZFAND2AQ8N6M9 145 aa10.61□□□□□ -0.71
SCNN1A-201ENST00000228916 C14orf178Q8N769 122 aaPredicted RBP10.61□□□□□ -0.71
SCNN1A-201ENST00000228916 PPDPFLQ8WWR9 84 aa10.61□□□□□ -0.71
SCNN1A-201ENST00000228916 MED13LQ71F56 2210 aa10.61□□□□□ -0.71
SCNN1A-201ENST00000228916 TEN1Q86WV5 123 aa10.6□□□□□ -0.71
SCNN1A-201ENST00000228916 KLHL30-AS1Q8NEE0 82 aa10.6□□□□□ -0.71
SCNN1A-201ENST00000228916 A0A0J9YY99 117 aa10.6□□□□□ -0.71
SCNN1A-201ENST00000228916 XGP55808 180 aa10.6□□□□□ -0.71
SCNN1A-201ENST00000228916 GLMPQ8WWB7 406 aa10.6□□□□□ -0.71
SCNN1A-201ENST00000228916 PTH2Q96A98 100 aa10.6□□□□□ -0.71
SCNN1A-201ENST00000228916 EEF1AKMT3Q96AZ1 226 aa10.6□□□□□ -0.71
SCNN1A-201ENST00000228916 C16orf92Q96LL3 132 aa10.6□□□□□ -0.71
SCNN1A-201ENST00000228916 IGLV4-69A0A075B6H9 119 aa10.6□□□□□ -0.71
SCNN1A-201ENST00000228916 SPRY2O43597 315 aa10.6□□□□□ -0.71
SCNN1A-201ENST00000228916 SFTA2Q6UW10 78 aa10.6□□□□□ -0.71
SCNN1A-201ENST00000228916 C9orf139Q6ZV77 190 aa10.6□□□□□ -0.71
SCNN1A-201ENST00000228916 C20orf173Q96LM9 149 aa10.6□□□□□ -0.71
SCNN1A-201ENST00000228916 TRBV7-1A0A0A6YYK4 115 aa10.59□□□□□ -0.71
SCNN1A-201ENST00000228916 MED14OSP0DP75 135 aa10.59□□□□□ -0.71
SCNN1A-201ENST00000228916 TCF15Q12870 199 aa10.59□□□□□ -0.71
SCNN1A-201ENST00000228916 GPHB5Q86YW7 130 aa10.59□□□□□ -0.71
SCNN1A-201ENST00000228916 TRAV21A0A0B4J279 112 aa10.59□□□□□ -0.71
SCNN1A-201ENST00000228916 C11orf86A6NJI1 115 aa10.59□□□□□ -0.71
SCNN1A-201ENST00000228916 LINC00477Q96M19 166 aa10.59□□□□□ -0.71
SCNN1A-201ENST00000228916 NBASA2RRP1 2371 aa10.59□□□□□ -0.71
SCNN1A-201ENST00000228916 TRBV20-1A0A075B6N2 111 aa10.58□□□□□ -0.72
SCNN1A-201ENST00000228916 G3V318 75 aa10.58□□□□□ -0.72
SCNN1A-201ENST00000228916 DUSP14O95147 198 aaKnown RBP10.58□□□□□ -0.72
SCNN1A-201ENST00000228916 TCL1BO95988 128 aa10.58□□□□□ -0.72
SCNN1A-201ENST00000228916 PPP1R17O96001 155 aa10.58□□□□□ -0.72
SCNN1A-201ENST00000228916 TSHBP01222 138 aa10.58□□□□□ -0.72
SCNN1A-201ENST00000228916 ASIPP42127 132 aa10.58□□□□□ -0.72
SCNN1A-201ENST00000228916 POM121L12Q8N7R1 296 aa10.58□□□□□ -0.72
SCNN1A-201ENST00000228916 VCX2Q9H322 139 aa10.58□□□□□ -0.72
SCNN1A-201ENST00000228916 PHLDA3Q9Y5J5 127 aa10.58□□□□□ -0.72
SCNN1A-201ENST00000228916 IGHV1-69DA0A0B4J2H0 117 aa10.58□□□□□ -0.72
SCNN1A-201ENST00000228916 S100A4P26447 101 aaKnown RBP10.58□□□□□ -0.72
SCNN1A-201ENST00000228916 ZFP36P26651 326 aaKnown RBP10.58□□□□□ -0.72
SCNN1A-201ENST00000228916 PAPPA-AS1Q5QFB9 102 aa10.58□□□□□ -0.72
SCNN1A-201ENST00000228916 WFDC12Q8WWY7 111 aa10.58□□□□□ -0.72
SCNN1A-201ENST00000228916 SPTA1P02549 2419 aa10.58□□□□□ -0.72
SCNN1A-201ENST00000228916 LINC01548A6NM66 108 aa10.58□□□□□ -0.72
SCNN1A-201ENST00000228916 MGPP08493 103 aa10.58□□□□□ -0.72
SCNN1A-201ENST00000228916 J3KRW8 73 aa10.57□□□□□ -0.72
SCNN1A-201ENST00000228916 HERVK_113P61574 105 aa10.57□□□□□ -0.72
SCNN1A-201ENST00000228916 AJUBAQ96IF1 538 aa10.57□□□□□ -0.72
SCNN1A-201ENST00000228916 IGIPA6NJ69 53 aa10.57□□□□□ -0.72
SCNN1A-201ENST00000228916 IGHV3-30P01768 117 aa10.57□□□□□ -0.72
SCNN1A-201ENST00000228916 CFC1BP0CG36 223 aa10.57□□□□□ -0.72
SCNN1A-201ENST00000228916 CFC1P0CG37 223 aa10.57□□□□□ -0.72
SCNN1A-201ENST00000228916 IGHV3-30-5P0DP03 117 aa10.57□□□□□ -0.72
SCNN1A-201ENST00000228916 RPL32P62910 135 aaKnown RBP10.57□□□□□ -0.72
SCNN1A-201ENST00000228916 ANXA2RQ3ZCQ2 193 aa10.57□□□□□ -0.72
SCNN1A-201ENST00000228916 PTPRQQ9UMZ3 2332 aa10.57□□□□□ -0.72
SCNN1A-201ENST00000228916 FBXL19-AS1Q494R0 122 aa10.56□□□□□ -0.72
SCNN1A-201ENST00000228916 SIRPDQ9H106 197 aa10.56□□□□□ -0.72
SCNN1A-201ENST00000228916 C10orf126Q8N4M7 172 aa10.56□□□□□ -0.72
SCNN1A-201ENST00000228916 A8MWV9 139 aa10.56□□□□□ -0.72
SCNN1A-201ENST00000228916 C11orf71Q6IPW1 123 aa10.56□□□□□ -0.72
SCNN1A-201ENST00000228916 Q6ZS46 218 aa10.56□□□□□ -0.72
SCNN1A-201ENST00000228916 SLC25A29Q8N8R3 303 aa10.56□□□□□ -0.72
SCNN1A-201ENST00000228916 RNASE3P12724 160 aaKnown RBP10.55□□□□□ -0.72
SCNN1A-201ENST00000228916 PMVKQ15126 192 aa10.55□□□□□ -0.72
SCNN1A-201ENST00000228916 FAM19A4Q96LR4 140 aa10.55□□□□□ -0.72
SCNN1A-201ENST00000228916 IGHV4OR15-8A0A075B7B6 117 aa10.55□□□□□ -0.72
SCNN1A-201ENST00000228916 A0A087WW49 117 aa10.55□□□□□ -0.72
SCNN1A-201ENST00000228916 OVOL1O14753 267 aa10.55□□□□□ -0.72
SCNN1A-201ENST00000228916 NXPH4O95158 308 aa10.55□□□□□ -0.72
SCNN1A-201ENST00000228916 TSPEAR-AS2P59090 65 aa10.55□□□□□ -0.72
SCNN1A-201ENST00000228916 LINC00315P59091 139 aa10.55□□□□□ -0.72
SCNN1A-201ENST00000228916 OR10J6PQ8NGY7 276 aa10.55□□□□□ -0.72
SCNN1A-201ENST00000228916 TP53TG1Q9Y2A0 90 aa10.55□□□□□ -0.72
SCNN1A-201ENST00000228916 KIF25-AS1Q9Y6Z4 181 aa10.55□□□□□ -0.72
SCNN1A-201ENST00000228916 SOCS3O14543 225 aa10.54□□□□□ -0.72
SCNN1A-201ENST00000228916 APRG1Q8IVJ8 170 aa10.54□□□□□ -0.72
SCNN1A-201ENST00000228916 CCL21O00585 134 aa10.54□□□□□ -0.72
SCNN1A-201ENST00000228916 ZNF688P0C7X2 276 aa10.54□□□□□ -0.72
SCNN1A-201ENST00000228916 AMELXQ99217 191 aa10.54□□□□□ -0.72
SCNN1A-201ENST00000228916 EMP1P54849 157 aa10.53□□□□□ -0.72
SCNN1A-201ENST00000228916 ERG28Q9UKR5 140 aa10.53□□□□□ -0.72
SCNN1A-201ENST00000228916 PTPRZ1P23471 2315 aaPredicted RBP10.53□□□□□ -0.72
SCNN1A-201ENST00000228916 GNRH2O43555 120 aa10.53□□□□□ -0.72
SCNN1A-201ENST00000228916 POLR2KP53803 58 aaKnown RBP10.53□□□□□ -0.72
SCNN1A-201ENST00000228916 ANKRD29Q8N6D5 301 aa10.53□□□□□ -0.72
SCNN1A-201ENST00000228916 TMEM141Q96I45 108 aa10.53□□□□□ -0.72
SCNN1A-201ENST00000228916 K7ENP7 123 aa10.53□□□□□ -0.72
SCNN1A-201ENST00000228916 TIMM17AQ99595 171 aa10.53□□□□□ -0.72
SCNN1A-201ENST00000228916 PRO1854Q9UHT4 67 aa10.53□□□□□ -0.72
SCNN1A-201ENST00000228916 UBE2E1P51965 193 aa10.52□□□□□ -0.72
SCNN1A-201ENST00000228916 MUC6Q6W4X9 2439 aa10.52□□□□□ -0.73
SCNN1A-201ENST00000228916 MUC4Q99102 2169 aa10.52□□□□□ -0.73
SCNN1A-201ENST00000228916 DEFB1P60022 68 aa10.52□□□□□ -0.73
SCNN1A-201ENST00000228916 M0QXV9 152 aa10.51□□□□□ -0.73
SCNN1A-201ENST00000228916 RNASE4P34096 147 aaKnown RBP10.51□□□□□ -0.73
SCNN1A-201ENST00000228916 TMEM262E9PQX1 116 aa10.51□□□□□ -0.73
SCNN1A-201ENST00000228916 ZNF876PQ49A33 203 aa10.51□□□□□ -0.73
SCNN1A-201ENST00000228916 ZNRF2Q8NHG8 242 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms