RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 FER1L6-AS1Q8NA97 138 aa13.35□□□□□ -0.27
CBX1-201ENST00000225603 MIEN1Q9BRT3 115 aa13.35□□□□□ -0.27
CBX1-201ENST00000225603 FABP5P3A8MUU1 101 aa13.34□□□□□ -0.27
CBX1-201ENST00000225603 J3KRW8 73 aa13.34□□□□□ -0.27
CBX1-201ENST00000225603 IGLC6P0CF74 106 aa13.34□□□□□ -0.27
CBX1-201ENST00000225603 ZNF575Q86XF7 245 aa13.34□□□□□ -0.27
CBX1-201ENST00000225603 C2orf88Q9BSF0 95 aa13.34□□□□□ -0.27
CBX1-201ENST00000225603 ORM1P02763 201 aa13.33□□□□□ -0.28
CBX1-201ENST00000225603 RAB4AP20338 218 aa13.33□□□□□ -0.28
CBX1-201ENST00000225603 INSL3P51460 131 aa13.33□□□□□ -0.28
CBX1-201ENST00000225603 SSTP61278 116 aa13.33□□□□□ -0.28
CBX1-201ENST00000225603 H3BMM0 161 aa13.32□□□□□ -0.28
CBX1-201ENST00000225603 SPATA45Q537H7 98 aa13.32□□□□□ -0.28
CBX1-201ENST00000225603 WFDC10AQ9H1F0 79 aa13.32□□□□□ -0.28
CBX1-201ENST00000225603 C19orf73Q9NVV2 129 aa13.32□□□□□ -0.28
CBX1-201ENST00000225603 LENEPQ9Y5L5 61 aa13.32□□□□□ -0.28
CBX1-201ENST00000225603 MUC21A0A0G2JKD1 596 aa13.32□□□□□ -0.28
CBX1-201ENST00000225603 MUC21A0A140T8X8 626 aa13.32□□□□□ -0.28
CBX1-201ENST00000225603 EREGO14944 169 aa13.32□□□□□ -0.28
CBX1-201ENST00000225603 HLA-DRB4P13762 266 aa13.32□□□□□ -0.28
CBX1-201ENST00000225603 LINC01559Q495D7 138 aa13.32□□□□□ -0.28
CBX1-201ENST00000225603 MUC21Q5SSG8 566 aa13.32□□□□□ -0.28
CBX1-201ENST00000225603 FAM104BQ5XKR9 115 aa13.32□□□□□ -0.28
CBX1-201ENST00000225603 ZNF705AQ6ZN79 300 aaPredicted RBP13.32□□□□□ -0.28
CBX1-201ENST00000225603 HLA-DRB4X5D2U9 266 aa13.32□□□□□ -0.28
CBX1-201ENST00000225603 RBMY1BA6NDE4 496 aaKnown RBP13.31□□□□□ -0.28
CBX1-201ENST00000225603 RBMY1EA6NEQ0 496 aaKnown RBP13.31□□□□□ -0.28
CBX1-201ENST00000225603 OR11H12B2RN74 326 aa13.31□□□□□ -0.28
CBX1-201ENST00000225603 RBMY1DP0C7P1 496 aaKnown RBP13.31□□□□□ -0.28
CBX1-201ENST00000225603 AMTNQ6UX39 209 aa13.31□□□□□ -0.28
CBX1-201ENST00000225603 TMEM70Q9BUB7 260 aa13.31□□□□□ -0.28
CBX1-201ENST00000225603 U3KQK5 164 aa13.31□□□□□ -0.28
CBX1-201ENST00000225603 AMN1Q8IY45 258 aa13.31□□□□□ -0.28
CBX1-201ENST00000225603 MCRIP2Q9BUT9 160 aaKnown RBP13.31□□□□□ -0.28
CBX1-201ENST00000225603 SNHG12Q9BXW3 62 aa13.31□□□□□ -0.28
CBX1-201ENST00000225603 DUSP14O95147 198 aaKnown RBP13.3□□□□□ -0.28
CBX1-201ENST00000225603 LEPROTL1O95214 131 aa13.3□□□□□ -0.28
CBX1-201ENST00000225603 OR5AL1P0C617 328 aa13.3□□□□□ -0.28
CBX1-201ENST00000225603 TWIST1Q15672 202 aa13.3□□□□□ -0.28
CBX1-201ENST00000225603 ATOH7Q8N100 152 aa13.3□□□□□ -0.28
CBX1-201ENST00000225603 D6R8Y8 96 aa13.29□□□□□ -0.28
CBX1-201ENST00000225603 LINC00173Q6ZV60 143 aa13.29□□□□□ -0.28
CBX1-201ENST00000225603 SPATA12Q7Z6I5 190 aa13.29□□□□□ -0.28
CBX1-201ENST00000225603 C11orf21Q9P2W6 132 aa13.29□□□□□ -0.28
CBX1-201ENST00000225603 A0A1B0GV90 55 aa13.29□□□□□ -0.28
CBX1-201ENST00000225603 M0R143 59 aa13.29□□□□□ -0.28
CBX1-201ENST00000225603 RNASE4P34096 147 aaKnown RBP13.29□□□□□ -0.28
CBX1-201ENST00000225603 FXYD7P58549 80 aa13.29□□□□□ -0.28
CBX1-201ENST00000225603 CNFNQ9BYD5 112 aa13.29□□□□□ -0.28
CBX1-201ENST00000225603 TRBV7-9A0A0J9YWB2 115 aa13.28□□□□□ -0.28
CBX1-201ENST00000225603 A8MTW9 85 aa13.28□□□□□ -0.28
CBX1-201ENST00000225603 KLLNB2CW77 178 aa13.28□□□□□ -0.28
CBX1-201ENST00000225603 CRXO43186 299 aaPredicted RBP13.28□□□□□ -0.28
CBX1-201ENST00000225603 SPINK13Q1W4C9 94 aa13.28□□□□□ -0.28
CBX1-201ENST00000225603 MRPL51Q4U2R6 128 aaKnown RBP13.28□□□□□ -0.28
CBX1-201ENST00000225603 AP5S1Q9NUS5 200 aa13.28□□□□□ -0.28
CBX1-201ENST00000225603 ORMDL3Q8N138 153 aa13.28□□□□□ -0.28
CBX1-201ENST00000225603 ODF3Q96PU9 254 aa13.28□□□□□ -0.28
CBX1-201ENST00000225603 TRAV12-2A0A075B6T6 113 aa13.27□□□□□ -0.28
CBX1-201ENST00000225603 FA2HQ7L5A8 372 aa13.27□□□□□ -0.28
CBX1-201ENST00000225603 PRSS3P2Q8NHM4 247 aa13.27□□□□□ -0.28
CBX1-201ENST00000225603 PRELID3AQ96N28 172 aa13.27□□□□□ -0.28
CBX1-201ENST00000225603 IGKV3D-20A0A0C4DH25 116 aa13.27□□□□□ -0.29
CBX1-201ENST00000225603 SYS1-DBNDD2H3BUS1 97 aa13.27□□□□□ -0.29
CBX1-201ENST00000225603 OXLD1Q5BKU9 147 aa13.27□□□□□ -0.29
CBX1-201ENST00000225603 MRPL52Q86TS9 123 aaKnown RBP13.27□□□□□ -0.29
CBX1-201ENST00000225603 TMEM191AQ9H0A3 160 aa13.27□□□□□ -0.29
CBX1-201ENST00000225603 WIPF1O43516 503 aa13.26□□□□□ -0.29
CBX1-201ENST00000225603 MAJINQ3KP22 176 aa13.26□□□□□ -0.29
CBX1-201ENST00000225603 FAM110AQ9BQ89 295 aa13.26□□□□□ -0.29
CBX1-201ENST00000225603 TRAV9-2A0A087WT02 112 aa13.25□□□□□ -0.29
CBX1-201ENST00000225603 IGLC3P0DOY3 106 aa13.25□□□□□ -0.29
CBX1-201ENST00000225603 LEPP41159 167 aa13.25□□□□□ -0.29
CBX1-201ENST00000225603 CMC4P56277 68 aaPredicted RBP13.25□□□□□ -0.29
CBX1-201ENST00000225603 MSRB1Q9NZV6 116 aa13.25□□□□□ -0.29
CBX1-201ENST00000225603 HSPB8Q9UJY1 196 aa13.25□□□□□ -0.29
CBX1-201ENST00000225603 PKD1L1Q8TDX9 2849 aa13.25□□□□□ -0.29
CBX1-201ENST00000225603 IFI27P40305 119 aaPredicted RBP13.25□□□□□ -0.29
CBX1-201ENST00000225603 CDKN1BP46527 198 aa13.25□□□□□ -0.29
CBX1-201ENST00000225603 UQCR10Q9UDW1 63 aa13.25□□□□□ -0.29
CBX1-201ENST00000225603 TRAV12-3A0A0B4J271 114 aa13.24□□□□□ -0.29
CBX1-201ENST00000225603 TRPT1Q86TN4 253 aaKnown RBP13.24□□□□□ -0.29
CBX1-201ENST00000225603 STHQ8IWL8 128 aa13.24□□□□□ -0.29
CBX1-201ENST00000225603 DEFB125Q8N687 156 aa13.24□□□□□ -0.29
CBX1-201ENST00000225603 CMYA5Q8N3K9 4069 aa13.24□□□□□ -0.29
CBX1-201ENST00000225603 ANK2Q01484 3957 aa13.24□□□□□ -0.29
CBX1-201ENST00000225603 C20orf202A1L168 122 aa13.24□□□□□ -0.29
CBX1-201ENST00000225603 CKS2P33552 79 aa13.24□□□□□ -0.29
CBX1-201ENST00000225603 MAP1LC3CQ9BXW4 147 aa13.24□□□□□ -0.29
CBX1-201ENST00000225603 LOC389332A0A1B0GUA5 103 aa13.23□□□□□ -0.29
CBX1-201ENST00000225603 TSPOP30536 169 aa13.23□□□□□ -0.29
CBX1-201ENST00000225603 RNF185Q96GF1 192 aa13.23□□□□□ -0.29
CBX1-201ENST00000225603 TRAV21A0A0B4J279 112 aa13.23□□□□□ -0.29
CBX1-201ENST00000225603 C7orf71A4D174 169 aa13.23□□□□□ -0.29
CBX1-201ENST00000225603 SMKR1H3BMG3 65 aa13.23□□□□□ -0.29
CBX1-201ENST00000225603 OR10AG1Q8NH19 301 aa13.23□□□□□ -0.29
CBX1-201ENST00000225603 PET117Q6UWS5 81 aa13.22□□□□□ -0.29
CBX1-201ENST00000225603 GTSCR1Q86UQ5 136 aa13.22□□□□□ -0.29
CBX1-201ENST00000225603 CLUHP3Q96NS8 147 aa13.22□□□□□ -0.29
CBX1-201ENST00000225603 NCR2O95944 276 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms