RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 DAZ1Q9NQZ3 744 aaKnown RBP10.03□□□□□ -0.8
SRP54-201ENST00000216774 SPTBN1Q01082 2364 aaKnown RBP10.02□□□□□ -0.8
SRP54-201ENST00000216774 GNRH2O43555 120 aa10.02□□□□□ -0.81
SRP54-201ENST00000216774 SPRY2O43597 315 aa10.02□□□□□ -0.81
SRP54-201ENST00000216774 IGHV3-11P01762 117 aa10.02□□□□□ -0.81
SRP54-201ENST00000216774 PF4V1P10720 104 aa10.02□□□□□ -0.81
SRP54-201ENST00000216774 SAMD13Q5VXD3 122 aa10.02□□□□□ -0.81
SRP54-201ENST00000216774 ZNF479Q96JC4 524 aa10.02□□□□□ -0.81
SRP54-201ENST00000216774 HIVEP3Q5T1R4 2406 aa10.02□□□□□ -0.81
SRP54-201ENST00000216774 IGHV4OR15-8A0A075B7B6 117 aa10.02□□□□□ -0.81
SRP54-201ENST00000216774 A0A087WW49 117 aa10.02□□□□□ -0.81
SRP54-201ENST00000216774 IGHV4-61A0A0C4DH41 118 aa10.02□□□□□ -0.81
SRP54-201ENST00000216774 KLLNB2CW77 178 aa10.02□□□□□ -0.81
SRP54-201ENST00000216774 F6UB75 175 aa10.02□□□□□ -0.81
SRP54-201ENST00000216774 H3BUX3 64 aa10.02□□□□□ -0.81
SRP54-201ENST00000216774 IGLV1-40P01703 118 aa10.02□□□□□ -0.81
SRP54-201ENST00000216774 LY6DQ14210 128 aa10.02□□□□□ -0.81
SRP54-201ENST00000216774 PRSS29PA6NIE9 313 aa10.01□□□□□ -0.81
SRP54-201ENST00000216774 F8W1H4 67 aa10.01□□□□□ -0.81
SRP54-201ENST00000216774 IGHV4-38-2P0DP08 117 aa10.01□□□□□ -0.81
SRP54-201ENST00000216774 LY6EQ16553 131 aa10.01□□□□□ -0.81
SRP54-201ENST00000216774 KIF25-AS1Q9Y6Z4 181 aa10.01□□□□□ -0.81
SRP54-201ENST00000216774 K7EMT4 169 aa10□□□□□ -0.81
SRP54-201ENST00000216774 NDUFS8O00217 210 aa10□□□□□ -0.81
SRP54-201ENST00000216774 ID1P41134 155 aa10□□□□□ -0.81
SRP54-201ENST00000216774 RIPPLY3P57055 190 aa10□□□□□ -0.81
SRP54-201ENST00000216774 LINC00315P59091 139 aa10□□□□□ -0.81
SRP54-201ENST00000216774 C10orf105Q8TEF2 133 aa10□□□□□ -0.81
SRP54-201ENST00000216774 PRADC1Q9BSG0 188 aa10□□□□□ -0.81
SRP54-201ENST00000216774 ABCA2Q9BZC7 2435 aa10□□□□□ -0.81
SRP54-201ENST00000216774 LGALS1P09382 135 aaKnown RBP9.99□□□□□ -0.81
SRP54-201ENST00000216774 RRN3P1Q2M238 152 aa9.99□□□□□ -0.81
SRP54-201ENST00000216774 CYSLTR1Q9Y271 337 aa9.99□□□□□ -0.81
SRP54-201ENST00000216774 COL6A6A6NMZ7 2263 aa9.99□□□□□ -0.81
SRP54-201ENST00000216774 BLCAPP62952 87 aa9.99□□□□□ -0.81
SRP54-201ENST00000216774 RPL24P83731 157 aaKnown RBP9.99□□□□□ -0.81
SRP54-201ENST00000216774 CFHR3Q02985 330 aa9.99□□□□□ -0.81
SRP54-201ENST00000216774 FAM159AQ6UWV7 190 aa9.99□□□□□ -0.81
SRP54-201ENST00000216774 ZNF580Q9UK33 172 aa9.99□□□□□ -0.81
SRP54-201ENST00000216774 IGKV3-7A0A075B6H7 116 aa9.98□□□□□ -0.81
SRP54-201ENST00000216774 PAPPA-AS1Q5QFB9 102 aa9.98□□□□□ -0.81
SRP54-201ENST00000216774 TEX48A0A1B0GUV7 120 aa9.98□□□□□ -0.81
SRP54-201ENST00000216774 DCANP1Q8TF63 244 aa9.98□□□□□ -0.81
SRP54-201ENST00000216774 COX6B1P14854 86 aa9.97□□□□□ -0.81
SRP54-201ENST00000216774 POLR2KP53803 58 aaKnown RBP9.97□□□□□ -0.81
SRP54-201ENST00000216774 SCGB2A2Q13296 93 aa9.97□□□□□ -0.81
SRP54-201ENST00000216774 CCL19Q99731 98 aa9.97□□□□□ -0.81
SRP54-201ENST00000216774 TMEM238LA0A1B0GVL6 79 aa9.96□□□□□ -0.81
SRP54-201ENST00000216774 IGIPA6NJ69 53 aa9.96□□□□□ -0.81
SRP54-201ENST00000216774 A6NJY4 79 aa9.96□□□□□ -0.81
SRP54-201ENST00000216774 ZNF815PA8K554 130 aa9.96□□□□□ -0.81
SRP54-201ENST00000216774 VCYO14598 125 aa9.96□□□□□ -0.81
SRP54-201ENST00000216774 DUSP14O95147 198 aaKnown RBP9.96□□□□□ -0.81
SRP54-201ENST00000216774 CRYGDP07320 174 aa9.96□□□□□ -0.81
SRP54-201ENST00000216774 GNLYP22749 145 aa9.96□□□□□ -0.81
SRP54-201ENST00000216774 CLEC2AQ6UVW9 174 aa9.96□□□□□ -0.81
SRP54-201ENST00000216774 TMEM141Q96I45 108 aa9.96□□□□□ -0.81
SRP54-201ENST00000216774 ODF3Q96PU9 254 aa9.96□□□□□ -0.81
SRP54-201ENST00000216774 MSMBP08118 114 aa9.96□□□□□ -0.82
SRP54-201ENST00000216774 SUMO4Q6EEV6 95 aa9.96□□□□□ -0.82
SRP54-201ENST00000216774 ZFP2Q6ZN57 461 aa9.96□□□□□ -0.82
SRP54-201ENST00000216774 Q6ZS46 218 aa9.96□□□□□ -0.82
SRP54-201ENST00000216774 LCNL1Q6ZST4 164 aa9.96□□□□□ -0.82
SRP54-201ENST00000216774 KIR2DL4Q99706 377 aa9.96□□□□□ -0.82
SRP54-201ENST00000216774 TP53TG1Q9Y2A0 90 aa9.96□□□□□ -0.82
SRP54-201ENST00000216774 HOXA3O43365 443 aaPredicted RBP9.95□□□□□ -0.82
SRP54-201ENST00000216774 HERVK_113P61574 105 aa9.95□□□□□ -0.82
SRP54-201ENST00000216774 TIMM17AQ99595 171 aa9.95□□□□□ -0.82
SRP54-201ENST00000216774 PRORYQ9H606 182 aa9.95□□□□□ -0.82
SRP54-201ENST00000216774 SPANXB1Q9NS25 103 aaPredicted RBP9.95□□□□□ -0.82
SRP54-201ENST00000216774 IGLV4-69A0A075B6H9 119 aa9.95□□□□□ -0.82
SRP54-201ENST00000216774 H3BMG7 143 aa9.95□□□□□ -0.82
SRP54-201ENST00000216774 TSHBP01222 138 aa9.95□□□□□ -0.82
SRP54-201ENST00000216774 PMVKQ15126 192 aa9.95□□□□□ -0.82
SRP54-201ENST00000216774 SCGB1D4Q6XE38 83 aa9.95□□□□□ -0.82
SRP54-201ENST00000216774 TRBV6-5A0A0K0K1A5 114 aa9.94□□□□□ -0.82
SRP54-201ENST00000216774 TRBV27A0A0K0K1C4 114 aa9.94□□□□□ -0.82
SRP54-201ENST00000216774 J3QR89 54 aa9.94□□□□□ -0.82
SRP54-201ENST00000216774 LGALS9O00182 355 aa9.94□□□□□ -0.82
SRP54-201ENST00000216774 CD7P09564 240 aa9.94□□□□□ -0.82
SRP54-201ENST00000216774 SRD5A1P18405 259 aa9.94□□□□□ -0.82
SRP54-201ENST00000216774 WFDC2Q14508 124 aa9.94□□□□□ -0.82
SRP54-201ENST00000216774 AGRNO00468 2067 aa9.94□□□□□ -0.82
SRP54-201ENST00000216774 C11orf86A6NJI1 115 aa9.94□□□□□ -0.82
SRP54-201ENST00000216774 GAGE13Q4V321 117 aa9.94□□□□□ -0.82
SRP54-201ENST00000216774 MORN3Q6PF18 240 aaPredicted RBP9.94□□□□□ -0.82
SRP54-201ENST00000216774 MUC4Q99102 2169 aa9.93□□□□□ -0.82
SRP54-201ENST00000216774 TRAV12-3A0A0B4J271 114 aa9.93□□□□□ -0.82
SRP54-201ENST00000216774 C9orf85Q96MD7 179 aa9.93□□□□□ -0.82
SRP54-201ENST00000216774 JPT2Q9H910 190 aa9.93□□□□□ -0.82
SRP54-201ENST00000216774 ITPR1Q14643 2758 aa9.93□□□□□ -0.82
SRP54-201ENST00000216774 IGHV4-30-2A0A087WSY4 118 aa9.93□□□□□ -0.82
SRP54-201ENST00000216774 A0A087WWL8 130 aa9.93□□□□□ -0.82
SRP54-201ENST00000216774 SDHAF1A6NFY7 115 aa9.93□□□□□ -0.82
SRP54-201ENST00000216774 F5H697 171 aa9.93□□□□□ -0.82
SRP54-201ENST00000216774 PSMB8P28062 276 aa9.93□□□□□ -0.82
SRP54-201ENST00000216774 UBE2D1P51668 147 aa9.93□□□□□ -0.82
SRP54-201ENST00000216774 ATP5J2P56134 94 aa9.93□□□□□ -0.82
SRP54-201ENST00000216774 PRO0461Q9UI25 63 aa9.93□□□□□ -0.82
SRP54-201ENST00000216774 AKAP6Q13023 2319 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms