RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 HSD52Q0P140 79 aa10.64□□□□□ -0.71
SIX4-201ENST00000216513 ZNF664Q8N3J9 261 aa10.64□□□□□ -0.71
SIX4-201ENST00000216513 I3L3M4 83 aa10.64□□□□□ -0.71
SIX4-201ENST00000216513 XCL1P47992 114 aa10.64□□□□□ -0.71
SIX4-201ENST00000216513 NAV2Q8IVL1 2488 aa10.64□□□□□ -0.71
SIX4-201ENST00000216513 IGLV11-55A0A075B6I3 123 aa10.64□□□□□ -0.71
SIX4-201ENST00000216513 IGLV1-47P01700 117 aa10.63□□□□□ -0.71
SIX4-201ENST00000216513 RPL18AQ02543 176 aaKnown RBP10.63□□□□□ -0.71
SIX4-201ENST00000216513 LINC01006Q8NI28 216 aa10.63□□□□□ -0.71
SIX4-201ENST00000216513 IGHV1-24A0A0C4DH33 117 aa10.63□□□□□ -0.71
SIX4-201ENST00000216513 OXLD1Q5BKU9 147 aa10.63□□□□□ -0.71
SIX4-201ENST00000216513 Q6ZVH6 145 aa10.63□□□□□ -0.71
SIX4-201ENST00000216513 DYNAPQ8N1N2 210 aa10.63□□□□□ -0.71
SIX4-201ENST00000216513 MYO18BQ8IUG5 2567 aa10.63□□□□□ -0.71
SIX4-201ENST00000216513 TMEM89A2RUT3 159 aa10.63□□□□□ -0.71
SIX4-201ENST00000216513 GATA1P15976 413 aaPredicted RBP10.63□□□□□ -0.71
SIX4-201ENST00000216513 ZC2HC1AQ96GY0 325 aa10.63□□□□□ -0.71
SIX4-201ENST00000216513 IGLV10-54A0A075B6I4 117 aa10.63□□□□□ -0.71
SIX4-201ENST00000216513 CDPF1Q6NVV7 123 aa10.62□□□□□ -0.71
SIX4-201ENST00000216513 SYS1-DBNDD2H3BUS1 97 aa10.62□□□□□ -0.71
SIX4-201ENST00000216513 ADAMTSL5Q6ZMM2 481 aa10.62□□□□□ -0.71
SIX4-201ENST00000216513 GHRHP01286 108 aa10.62□□□□□ -0.71
SIX4-201ENST00000216513 KMT2EQ8IZD2 1858 aa10.62□□□□□ -0.71
SIX4-201ENST00000216513 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.62□□□□□ -0.71
SIX4-201ENST00000216513 TIMM21Q9BVV7 248 aa10.62□□□□□ -0.71
SIX4-201ENST00000216513 IGHV4-4A0A075B6R2 117 aa10.62□□□□□ -0.71
SIX4-201ENST00000216513 C2orf82Q6UX34 121 aa10.62□□□□□ -0.71
SIX4-201ENST00000216513 K7ERJ3 54 aa10.61□□□□□ -0.71
SIX4-201ENST00000216513 CTSGP08311 255 aa10.61□□□□□ -0.71
SIX4-201ENST00000216513 GPHB5Q86YW7 130 aa10.61□□□□□ -0.71
SIX4-201ENST00000216513 C10orf99Q6UWK7 81 aa10.61□□□□□ -0.71
SIX4-201ENST00000216513 HLA-DRB4P13762 266 aa10.61□□□□□ -0.71
SIX4-201ENST00000216513 HLA-DRB4X5D2U9 266 aa10.61□□□□□ -0.71
SIX4-201ENST00000216513 TRBV24-1A0A075B6N3 115 aa10.61□□□□□ -0.71
SIX4-201ENST00000216513 MORN5Q5VZ52 161 aa10.61□□□□□ -0.71
SIX4-201ENST00000216513 ATP6V0E2Q8NHE4 81 aa10.61□□□□□ -0.71
SIX4-201ENST00000216513 PLEKHB2Q96CS7 222 aa10.61□□□□□ -0.71
SIX4-201ENST00000216513 K7EIM0 57 aa10.61□□□□□ -0.71
SIX4-201ENST00000216513 M0R2N4 97 aa10.6□□□□□ -0.71
SIX4-201ENST00000216513 SPINK8P0C7L1 97 aa10.6□□□□□ -0.71
SIX4-201ENST00000216513 ESDP10768 282 aa10.6□□□□□ -0.71
SIX4-201ENST00000216513 LY6G5BQ8NDX9 201 aa10.6□□□□□ -0.71
SIX4-201ENST00000216513 MBD6Q96DN6 1003 aa10.6□□□□□ -0.71
SIX4-201ENST00000216513 LEPROTO15243 131 aa10.6□□□□□ -0.71
SIX4-201ENST00000216513 KIR3DS1Q14943 382 aa10.6□□□□□ -0.71
SIX4-201ENST00000216513 SIGMAR1Q99720 223 aa10.6□□□□□ -0.71
SIX4-201ENST00000216513 ZNF106Q9H2Y7 1883 aaKnown RBP10.6□□□□□ -0.71
SIX4-201ENST00000216513 UNQ9165/PRO28630Q6UXU0 137 aa10.6□□□□□ -0.71
SIX4-201ENST00000216513 ANAPC10Q9UM13 185 aa10.6□□□□□ -0.71
SIX4-201ENST00000216513 HHLA3Q9XRX5 114 aa10.6□□□□□ -0.71
SIX4-201ENST00000216513 I3L2K1 104 aa10.59□□□□□ -0.71
SIX4-201ENST00000216513 ZNF493Q6ZR52 646 aa10.59□□□□□ -0.71
SIX4-201ENST00000216513 SDHAF1A6NFY7 115 aa10.59□□□□□ -0.71
SIX4-201ENST00000216513 TMEM14CQ9P0S9 112 aa10.59□□□□□ -0.71
SIX4-201ENST00000216513 POLR3KQ9Y2Y1 108 aaPredicted RBP10.59□□□□□ -0.71
SIX4-201ENST00000216513 K7EN84 100 aa10.59□□□□□ -0.71
SIX4-201ENST00000216513 POU2AF1Q16633 256 aa10.59□□□□□ -0.71
SIX4-201ENST00000216513 MRPL51Q4U2R6 128 aaKnown RBP10.59□□□□□ -0.71
SIX4-201ENST00000216513 GAGE2AQ6NT46 116 aa10.59□□□□□ -0.71
SIX4-201ENST00000216513 C16orf54Q6UWD8 224 aa10.59□□□□□ -0.71
SIX4-201ENST00000216513 GTSF1LQ9H1H1 148 aa10.59□□□□□ -0.71
SIX4-201ENST00000216513 ABCA2Q9BZC7 2435 aa10.59□□□□□ -0.71
SIX4-201ENST00000216513 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.59□□□□□ -0.71
SIX4-201ENST00000216513 IGKV2-29A2NJV5 120 aaPredicted RBP10.59□□□□□ -0.71
SIX4-201ENST00000216513 EDA2RQ9HAV5 297 aa10.59□□□□□ -0.71
SIX4-201ENST00000216513 IGHG4P01861 327 aa10.58□□□□□ -0.72
SIX4-201ENST00000216513 KLF5Q13887 457 aaPredicted RBP10.58□□□□□ -0.72
SIX4-201ENST00000216513 FREM1Q5H8C1 2179 aa10.58□□□□□ -0.72
SIX4-201ENST00000216513 AGPAT4-IT1Q9H0P7 198 aa10.58□□□□□ -0.72
SIX4-201ENST00000216513 TM2D2Q9BX73 214 aa10.58□□□□□ -0.72
SIX4-201ENST00000216513 LINC01549A6NIU2 74 aa10.58□□□□□ -0.72
SIX4-201ENST00000216513 PMVKQ15126 192 aa10.58□□□□□ -0.72
SIX4-201ENST00000216513 DEFB131BA0A096LNP1 70 aa10.58□□□□□ -0.72
SIX4-201ENST00000216513 GAGE2EQ4V326 116 aa10.58□□□□□ -0.72
SIX4-201ENST00000216513 GAGE2DQ9UEU5 116 aa10.58□□□□□ -0.72
SIX4-201ENST00000216513 LYL1P12980 280 aa10.57□□□□□ -0.72
SIX4-201ENST00000216513 TMEM126AQ9H061 195 aa10.57□□□□□ -0.72
SIX4-201ENST00000216513 MAP6D1Q9H9H5 199 aa10.57□□□□□ -0.72
SIX4-201ENST00000216513 IGLV2-18A0A075B6J9 118 aa10.57□□□□□ -0.72
SIX4-201ENST00000216513 TRAV1-1A0A0B4J248 108 aa10.57□□□□□ -0.72
SIX4-201ENST00000216513 ODF3BA8MYP8 253 aa10.57□□□□□ -0.72
SIX4-201ENST00000216513 UTF1Q5T230 341 aa10.57□□□□□ -0.72
SIX4-201ENST00000216513 MYMXA0A1B0GTQ4 84 aa10.57□□□□□ -0.72
SIX4-201ENST00000216513 C9JAW5 83 aa10.57□□□□□ -0.72
SIX4-201ENST00000216513 NPYP01303 97 aa10.57□□□□□ -0.72
SIX4-201ENST00000216513 ZNF295-AS1Q8N0V1 137 aa10.57□□□□□ -0.72
SIX4-201ENST00000216513 CHAC1Q9BUX1 264 aa10.57□□□□□ -0.72
SIX4-201ENST00000216513 SUMO4Q6EEV6 95 aa10.56□□□□□ -0.72
SIX4-201ENST00000216513 AMTNQ6UX39 209 aa10.56□□□□□ -0.72
SIX4-201ENST00000216513 K7EMT4 169 aa10.56□□□□□ -0.72
SIX4-201ENST00000216513 SH2D6Q7Z4S9 175 aa10.56□□□□□ -0.72
SIX4-201ENST00000216513 C18orf32Q8TCD1 76 aa10.56□□□□□ -0.72
SIX4-201ENST00000216513 K7EQD1 137 aa10.55□□□□□ -0.72
SIX4-201ENST00000216513 GAGE2BQ13066 116 aa10.55□□□□□ -0.72
SIX4-201ENST00000216513 BUB3O43684 328 aa10.55□□□□□ -0.72
SIX4-201ENST00000216513 DKK2Q9UBU2 259 aa10.55□□□□□ -0.72
SIX4-201ENST00000216513 TEX22C9J3V5 150 aa10.55□□□□□ -0.72
SIX4-201ENST00000216513 Q6ZWC4 215 aa10.55□□□□□ -0.72
SIX4-201ENST00000216513 RPL32P62910 135 aaKnown RBP10.54□□□□□ -0.72
SIX4-201ENST00000216513 CHD8Q9HCK8 2581 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms