RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 RflnaQ7TS73 204 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 EtdQ80SW5 59 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Nup37Q9CWU9 326 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 3100002H09RikQ9CXW6 140 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Ifitm7G3X9Z2 141 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Ccl2P10148 148 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 CampP51437 172 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Smap2Q7TN29 428 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Slc25a16Q8C0K5 332 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Ssbp3Q9D032 388 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Cldn23Q9D7D7 296 aa13.13□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Gm17430F6RSK3 157 aa13.12□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Immp2lQ8BPT6 175 aa13.12□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 D930048N14RikA2AA67 225 aa13.12□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Adamts17E9Q4D1 1122 aa13.12□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Iqcf6G3UWF2 157 aa13.12□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 TymsP07607 307 aa13.12□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 EsdQ9R0P3 282 aa13.12□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Zfp677Q6PEP4 634 aa13.12□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 LgalslbQ7TPX9 165 aa13.12□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Znrf1Q91V17 227 aa13.12□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Gpr35Q9ES90 307 aa13.12□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Gm21913J3KML9 361 aa13.12□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Gm21776J3QPJ5 361 aa13.12□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 CenpvQ9CXS4 252 aa13.12□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 ChtopQ9CY57 249 aaKnown RBP13.12□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Mettl26Q9DCS2 204 aa13.12□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Arl6ip6Q8BH07 226 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 5930422O12RikQ8C4Y4 123 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Mrpl27Q99N92 148 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Tmem160Q9D938 188 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Cd200r1Q9ES57 326 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Cacna1aP97445 2368 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Trpm7Q923J1 1863 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 AtraidQ6PGD0 223 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Zpld1Q8BGZ8 415 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Stac2Q8R1B0 408 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Ormdl3Q9CPZ6 153 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Gm45736A0A1B0GS18 427 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 GzmbP04187 247 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Cd59bP58019 129 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Gm10118Q8C8J5 116 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Olfr1192-ps1A0A1L1SRD7 309 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 1700031F05RikB1AX30 191 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 SellP18337 372 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Atp6v0cP63082 155 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Slc25a35Q5SWT3 300 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Klk1b27Q9JM71 263 aa13.11□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Ighv6-3A0A075B5T2 118 aa13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Wnt5bP22726 359 aa13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Rpl23P62830 140 aaKnown RBP13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Fam219bQ14DQ1 197 aa13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Vmn1r54Q9EPB8 315 aa13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Hdgfl3Q9JMG7 202 aa13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Fndc7A2AED3 737 aa13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Olfr177E9Q7W1 309 aa13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 CirbpP60824 172 aaKnown RBP13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Gm21394Q497R7 227 aa13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Gpr132Q9Z282 382 aa13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Arf6P62331 175 aa13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Bsph1Q3UW26 133 aa13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Trpt1Q8K3A2 249 aa13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Ighv8-9A0A0G2JET1 119 aa13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Rpl36-ps4A0A140T8U4 117 aa13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 VwceQ3U515 929 aa13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 MturnQ8CGA4 131 aa13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Cnn3Q9DAW9 330 aaKnown RBP13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Zfp646Q6NV66 1788 aa13.1□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Klf12O35738 402 aa13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 P01638 115 aa13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Prss28Q924N9 274 aa13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 CcsQ9WU84 274 aa13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Trav7-4A0A075B6C1 113 aa13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Trbv1A0A0B4J1G7 116 aa13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Trav7d-4Q5R1H9 113 aa13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Srsf7Q8BL97 267 aaKnown RBP13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Scgb1b11A0A087WQJ0 93 aa13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 E430018J23RikE9PZQ8 461 aa13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Gm21719J3KMI9 230 aa13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Klf2Q60843 354 aaKnown RBP13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Rtn4rl2Q7M6Z0 420 aa13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Znf385cA2A5E6 429 aa13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Trav15-1-dv6-1Q5R1D2 117 aa13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Defb6Q91VD6 63 aa13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Ighv5-16A0A0B4J1P4 117 aa13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Zfp114B2RRA8 586 aa13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Gm11110Q3U4K9 109 aa13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 D630044L22RikQ8C701 164 aa13.09□□□□□ -0.31
Pcdha9-201ENSMUST00000115659 Pglyrp3A1A547 347 aa13.08□□□□□ -0.32
Pcdha9-201ENSMUST00000115659 St6galnac2P70277 373 aa13.08□□□□□ -0.32
Pcdha9-201ENSMUST00000115659 Sp9Q64HY3 484 aa13.08□□□□□ -0.32
Pcdha9-201ENSMUST00000115659 OpalinQ7M750 143 aa13.08□□□□□ -0.32
Pcdha9-201ENSMUST00000115659 Spock3Q8BKV0 436 aa13.08□□□□□ -0.32
Pcdha9-201ENSMUST00000115659 Gm10283Q8C3L5 117 aa13.08□□□□□ -0.32
Pcdha9-201ENSMUST00000115659 Trav6-1A0A075B5Z8 112 aa13.08□□□□□ -0.32
Pcdha9-201ENSMUST00000115659 BC053393A0A0B4J1F6 192 aa13.08□□□□□ -0.32
Pcdha9-201ENSMUST00000115659 Gm14548E9Q1Z6 680 aa13.08□□□□□ -0.32
Pcdha9-201ENSMUST00000115659 Ascl2O35885 263 aa13.08□□□□□ -0.32
Pcdha9-201ENSMUST00000115659 RalyQ64012 312 aaKnown RBP13.08□□□□□ -0.32
Pcdha9-201ENSMUST00000115659 Olfr263Q7TQT8 317 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms