RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 PjvkQ0ZLH2 352 aa5.73□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Klf2Q60843 354 aaKnown RBP5.73□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Zfp729bQ80VN4 1045 aa5.73□□□□□ -1.49
Bdnf-201ENSMUST00000053317 F930015N05RikQ8C3A3 210 aa5.73□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Gpr84Q8CIM5 396 aa5.73□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Olfr1009Q8VFK1 314 aa5.73□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Olfr1448Q8VFX1 314 aa5.73□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Olfr507Q8VG13 316 aa5.73□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Ergic1Q9DC16 290 aaKnown RBP5.73□□□□□ -1.49
Bdnf-201ENSMUST00000053317 SmpxQ9DC77 85 aa5.73□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Zdhhc16Q9ESG8 361 aa5.73□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Tmem183Q9JJB9 375 aa5.73□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Igkv4-80A0A075B5L7 116 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Ighv9-3A0A0B4J1J5 117 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Zfp456B2RUK9 458 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Arxes1C0HK79 180 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Arxes2C0HK80 180 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 AsmtD3KU66 387 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Gm20877J3QPZ4 227 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Gm27021M0QWE2 156 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Lsm2O35900 95 aaKnown RBP5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 P01725 110 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Rag2P21784 527 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Twist1P26687 206 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Otx1P80205 355 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Spink11Q09TK7 88 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Psmb6Q60692 238 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Rtn4rl2Q7M6Z0 420 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Vmn1r62Q8R2C0 300 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Olfr344Q8VFP9 309 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Olfr1404Q8VGE1 313 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Olfr362Q8VGV7 317 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Olfr124Q8VGW6 315 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Ms4a3Q920C4 213 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Rab32Q9CZE3 223 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Rhebl1Q9D8T3 184 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Nf1Q04690 2841 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Slc25a17O70579 307 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 ApcsP12246 224 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Atp4bP50992 294 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Cacfd1Q8BG21 171 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Rnf182Q8C432 247 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Nit1Q8VDK1 323 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Mpped1Q91ZG2 326 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Fam162bQ9CX19 157 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Igkv14-100A0A0G2JG36 117 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Gm4884E9PVP9 694 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Gm2174F6ZVF2 133 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Smlr1J3QMJ4 66 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Evi2aP20934 223 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Fgf12P61329 243 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Zfp936Q3ULA8 456 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Gm826Q3UQ74 109 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Smim9Q3V0X1 137 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Olfr1000Q7TR99 314 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Ifna13Q80SU4 189 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 SostQ99P68 211 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Vax2Q9WTP9 292 aa5.72□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Gm42543A0A0G2JET4 117 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Ighv1-76A0A0G2JFE9 117 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Gm10666K7N6B8 321 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Cryba1P02525 198 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Tcrg-V1P06325 135 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Prss2P07146 246 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Mdh2P08249 338 aaKnown RBP5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Scd2P13011 358 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Fabp6P51162 128 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Samd5Q3V1H9 173 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Wfdc8Q4KUS1 273 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Trappc1Q5NCF2 145 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Olfr147Q60886 317 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 SelplgQ62170 397 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Olfr1178Q7TR20 323 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Olfr996Q7TRA0 314 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Gm5148Q8BGG2 154 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Ankrd55Q8BLD6 626 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Gm9837Q8C607 126 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Slc35e4Q8K3D6 351 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Siglec12Q91Y57 467 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Hspb2Q99PR8 182 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Nicn1Q9CQM0 213 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Sval1Q9D2X6 151 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 V1ra8Q9EQ48 279 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Fam89bQ9QUI1 189 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Olfr154Q9QY00 318 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Nubp1Q9R060 320 aa5.71□□□□□ -1.49
Bdnf-201ENSMUST00000053317 Ighv6-4A0A0A6YX19 119 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm45753A0A1C7CYU8 86 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm37988J3QM41 62 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm21788J3QNH3 180 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Gm20767O70517 169 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Ifitm5O88728 134 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Pnliprp2P17892 482 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 LoxP28301 411 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Cks2P56390 79 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 St6galnac2P70277 373 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Tnfrsf26P83626 204 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Defa26Q3L180 93 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 MrgprfQ8VCJ6 343 aa5.71□□□□□ -1.5
Bdnf-201ENSMUST00000053317 Srd5a2Q99N99 254 aa5.71□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 114.8 ms