RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 GATA1P15976 413 aaPredicted RBP12.89□□□□□ -0.35
PHGDH-211ENST00000641213 SRD5A1P18405 259 aa12.89□□□□□ -0.35
PHGDH-211ENST00000641213 HSBP1L1C9JCN9 74 aa12.89□□□□□ -0.35
PHGDH-211ENST00000641213 H3BVH4 76 aa12.89□□□□□ -0.35
PHGDH-211ENST00000641213 CACNG7P62955 275 aa12.89□□□□□ -0.35
PHGDH-211ENST00000641213 VPREB3Q9UKI3 123 aa12.89□□□□□ -0.35
PHGDH-211ENST00000641213 PRRC2AP48634 2157 aaKnown RBP12.88□□□□□ -0.35
PHGDH-211ENST00000641213 TRAV21A0A0B4J279 112 aa12.88□□□□□ -0.35
PHGDH-211ENST00000641213 SPANXN1Q5VSR9 72 aa12.88□□□□□ -0.35
PHGDH-211ENST00000641213 Q6YL49 198 aa12.88□□□□□ -0.35
PHGDH-211ENST00000641213 SMIM15Q7Z3B0 74 aa12.87□□□□□ -0.35
PHGDH-211ENST00000641213 UFC1Q9Y3C8 167 aa12.87□□□□□ -0.35
PHGDH-211ENST00000641213 PTPN13Q12923 2485 aa12.87□□□□□ -0.35
PHGDH-211ENST00000641213 DEFB113Q30KQ7 82 aa12.87□□□□□ -0.35
PHGDH-211ENST00000641213 APRG1Q8IVJ8 170 aa12.87□□□□□ -0.35
PHGDH-211ENST00000641213 NXT2Q9NPJ8 142 aaKnown RBP12.87□□□□□ -0.35
PHGDH-211ENST00000641213 BEX4Q9NWD9 120 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-211ENST00000641213 TP73-AS1Q9UF72 201 aa12.87□□□□□ -0.35
PHGDH-211ENST00000641213 DOPEY2Q9Y3R5 2298 aa12.86□□□□□ -0.35
PHGDH-211ENST00000641213 RNASE4P34096 147 aaKnown RBP12.86□□□□□ -0.35
PHGDH-211ENST00000641213 COL5A1-AS1Q5SY13 56 aa12.86□□□□□ -0.35
PHGDH-211ENST00000641213 STPG4Q8N801 248 aa12.86□□□□□ -0.35
PHGDH-211ENST00000641213 DCANP1Q8TF63 244 aa12.86□□□□□ -0.35
PHGDH-211ENST00000641213 MS4A6AQ9H2W1 248 aa12.86□□□□□ -0.35
PHGDH-211ENST00000641213 SCRT2Q9NQ03 307 aa12.86□□□□□ -0.35
PHGDH-211ENST00000641213 TRBV7-9A0A0J9YWB2 115 aa12.85□□□□□ -0.35
PHGDH-211ENST00000641213 KIR3DS1Q14943 382 aa12.85□□□□□ -0.35
PHGDH-211ENST00000641213 Q5PR19 223 aa12.85□□□□□ -0.35
PHGDH-211ENST00000641213 MXRA5Q9NR99 2828 aa12.85□□□□□ -0.35
PHGDH-211ENST00000641213 ID1P41134 155 aa12.85□□□□□ -0.35
PHGDH-211ENST00000641213 ANXA2RQ3ZCQ2 193 aa12.85□□□□□ -0.35
PHGDH-211ENST00000641213 OR2K2Q8NGT1 345 aa12.85□□□□□ -0.35
PHGDH-211ENST00000641213 ZNF702PQ9H963 129 aa12.85□□□□□ -0.35
PHGDH-211ENST00000641213 TFPI2P48307 235 aa12.84□□□□□ -0.35
PHGDH-211ENST00000641213 LGALS9BQ3B8N2 356 aa12.84□□□□□ -0.35
PHGDH-211ENST00000641213 LGALS9CQ6DKI2 356 aa12.84□□□□□ -0.35
PHGDH-211ENST00000641213 LRRC75A-AS1Q8N1F1 130 aa12.84□□□□□ -0.35
PHGDH-211ENST00000641213 IFI27L1Q96BM0 104 aa12.84□□□□□ -0.35
PHGDH-211ENST00000641213 ABCA12Q86UK0 2595 aa12.84□□□□□ -0.35
PHGDH-211ENST00000641213 TRAV26-2A0A0B4J265 109 aa12.84□□□□□ -0.35
PHGDH-211ENST00000641213 HINT1P49773 126 aaPredicted RBP12.84□□□□□ -0.35
PHGDH-211ENST00000641213 SLC25A34Q6PIV7 304 aa12.84□□□□□ -0.35
PHGDH-211ENST00000641213 WFDC3Q8IUB2 231 aa12.84□□□□□ -0.35
PHGDH-211ENST00000641213 Q8N8P6 123 aa12.84□□□□□ -0.35
PHGDH-211ENST00000641213 NRACQ8N912 160 aa12.84□□□□□ -0.35
PHGDH-211ENST00000641213 GOLT1BQ9Y3E0 138 aa12.84□□□□□ -0.35
PHGDH-211ENST00000641213 IGLV2-18A0A075B6J9 118 aa12.83□□□□□ -0.36
PHGDH-211ENST00000641213 HOXA3O43365 443 aaPredicted RBP12.83□□□□□ -0.36
PHGDH-211ENST00000641213 FCER1GP30273 86 aa12.83□□□□□ -0.36
PHGDH-211ENST00000641213 LEPP41159 167 aa12.83□□□□□ -0.36
PHGDH-211ENST00000641213 ASIPP42127 132 aa12.83□□□□□ -0.36
PHGDH-211ENST00000641213 SAMD13Q5VXD3 122 aa12.83□□□□□ -0.36
PHGDH-211ENST00000641213 TEX15Q9BXT5 2789 aa12.83□□□□□ -0.36
PHGDH-211ENST00000641213 PRSS47A8MTI9 375 aa12.82□□□□□ -0.36
PHGDH-211ENST00000641213 MYOZ3Q8TDC0 251 aa12.82□□□□□ -0.36
PHGDH-211ENST00000641213 SPRY2O43597 315 aa12.82□□□□□ -0.36
PHGDH-211ENST00000641213 ELANEP08246 267 aa12.82□□□□□ -0.36
PHGDH-211ENST00000641213 LGALS1P09382 135 aaKnown RBP12.82□□□□□ -0.36
PHGDH-211ENST00000641213 ZNF25P17030 456 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-211ENST00000641213 S100A4P26447 101 aaKnown RBP12.82□□□□□ -0.36
PHGDH-211ENST00000641213 G0S2P27469 103 aa12.82□□□□□ -0.36
PHGDH-211ENST00000641213 MUC4Q99102 2169 aa12.82□□□□□ -0.36
PHGDH-211ENST00000641213 M0R381 172 aa12.81□□□□□ -0.36
PHGDH-211ENST00000641213 GNRH2O43555 120 aa12.81□□□□□ -0.36
PHGDH-211ENST00000641213 DEFB125Q8N687 156 aa12.81□□□□□ -0.36
PHGDH-211ENST00000641213 KLLNB2CW77 178 aa12.81□□□□□ -0.36
PHGDH-211ENST00000641213 MED14OSP0DP75 135 aa12.81□□□□□ -0.36
PHGDH-211ENST00000641213 Q96MF0 132 aa12.81□□□□□ -0.36
PHGDH-211ENST00000641213 PHLDA3Q9Y5J5 127 aa12.81□□□□□ -0.36
PHGDH-211ENST00000641213 SYNJ2BPP57105 145 aa12.8□□□□□ -0.36
PHGDH-211ENST00000641213 MRAP2Q96G30 205 aa12.8□□□□□ -0.36
PHGDH-211ENST00000641213 C18orf15Q96N68 181 aa12.8□□□□□ -0.36
PHGDH-211ENST00000641213 NAV2Q8IVL1 2488 aa12.8□□□□□ -0.36
PHGDH-211ENST00000641213 EPG5Q9HCE0 2579 aa12.8□□□□□ -0.36
PHGDH-211ENST00000641213 IGHV4OR15-8A0A075B7B6 117 aa12.79□□□□□ -0.36
PHGDH-211ENST00000641213 A0A087WW49 117 aa12.79□□□□□ -0.36
PHGDH-211ENST00000641213 RNASE3P12724 160 aaKnown RBP12.79□□□□□ -0.36
PHGDH-211ENST00000641213 TMEM158Q8WZ71 300 aa12.79□□□□□ -0.36
PHGDH-211ENST00000641213 UBE2E2Q96LR5 201 aa12.79□□□□□ -0.36
PHGDH-211ENST00000641213 LGALS9O00182 355 aa12.79□□□□□ -0.36
PHGDH-211ENST00000641213 COX8AP10176 69 aa12.79□□□□□ -0.36
PHGDH-211ENST00000641213 DPF1Q92782 380 aa12.79□□□□□ -0.36
PHGDH-211ENST00000641213 TMEM208Q9BTX3 173 aa12.79□□□□□ -0.36
PHGDH-211ENST00000641213 ZNF688P0C7X2 276 aa12.78□□□□□ -0.36
PHGDH-211ENST00000641213 KRTAP1-3Q8IUG1 177 aa12.78□□□□□ -0.36
PHGDH-211ENST00000641213 RNF152Q8N8N0 203 aa12.78□□□□□ -0.36
PHGDH-211ENST00000641213 WFDC12Q8WWY7 111 aa12.78□□□□□ -0.36
PHGDH-211ENST00000641213 AGRNO00468 2067 aa12.78□□□□□ -0.36
PHGDH-211ENST00000641213 ANKRD39Q53RE8 183 aa12.77□□□□□ -0.36
PHGDH-211ENST00000641213 PSMG4Q5JS54 123 aa12.77□□□□□ -0.36
PHGDH-211ENST00000641213 DPH3P1Q9H4G8 78 aa12.77□□□□□ -0.36
PHGDH-211ENST00000641213 APCP25054 2843 aa12.77□□□□□ -0.37
PHGDH-211ENST00000641213 K7EQG2 157 aa12.77□□□□□ -0.37
PHGDH-211ENST00000641213 CD5LO43866 347 aa12.77□□□□□ -0.37
PHGDH-211ENST00000641213 HOXD3P31249 432 aaPredicted RBP12.77□□□□□ -0.37
PHGDH-211ENST00000641213 MPV17L2Q567V2 206 aa12.77□□□□□ -0.37
PHGDH-211ENST00000641213 C14orf178Q8N769 122 aaPredicted RBP12.77□□□□□ -0.37
PHGDH-211ENST00000641213 DKK2Q9UBU2 259 aa12.77□□□□□ -0.37
PHGDH-211ENST00000641213 LAGE3Q14657 143 aa12.76□□□□□ -0.37
PHGDH-211ENST00000641213 OR1N2Q8NGR9 330 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms