RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 TRAV2A0A0B4J234 112 aa12.93□□□□□ -0.34
PHGDH-208ENST00000641023 JOSD1Q15040 202 aaPredicted RBP12.93□□□□□ -0.34
PHGDH-208ENST00000641023 ODF3Q96PU9 254 aa12.93□□□□□ -0.34
PHGDH-208ENST00000641023 NAGKQ9UJ70 344 aa12.93□□□□□ -0.34
PHGDH-208ENST00000641023 KLLNB2CW77 178 aa12.92□□□□□ -0.34
PHGDH-208ENST00000641023 FAM104BQ5XKR9 115 aa12.92□□□□□ -0.34
PHGDH-208ENST00000641023 DUSP14O95147 198 aaKnown RBP12.92□□□□□ -0.34
PHGDH-208ENST00000641023 OR5AL1P0C617 328 aa12.92□□□□□ -0.34
PHGDH-208ENST00000641023 FOSL1P15407 271 aa12.92□□□□□ -0.34
PHGDH-208ENST00000641023 TMEM191AQ9H0A3 160 aa12.92□□□□□ -0.34
PHGDH-208ENST00000641023 AMTP48728 403 aa12.91□□□□□ -0.34
PHGDH-208ENST00000641023 FOXI2Q6ZQN5 318 aa12.91□□□□□ -0.34
PHGDH-208ENST00000641023 INAFM1C9JVW0 142 aa12.9□□□□□ -0.34
PHGDH-208ENST00000641023 ZNF324O75467 553 aaPredicted RBP12.9□□□□□ -0.34
PHGDH-208ENST00000641023 HSBP1O75506 76 aa12.9□□□□□ -0.34
PHGDH-208ENST00000641023 LEPP41159 167 aa12.9□□□□□ -0.34
PHGDH-208ENST00000641023 AMN1Q8IY45 258 aa12.9□□□□□ -0.34
PHGDH-208ENST00000641023 TMEM61Q8N0U2 210 aa12.9□□□□□ -0.34
PHGDH-208ENST00000641023 SNAI2O43623 268 aa12.9□□□□□ -0.34
PHGDH-208ENST00000641023 KIR3DS1Q14943 382 aa12.9□□□□□ -0.34
PHGDH-208ENST00000641023 DEFB114Q30KQ6 69 aa12.9□□□□□ -0.34
PHGDH-208ENST00000641023 DNLZQ5SXM8 178 aa12.9□□□□□ -0.34
PHGDH-208ENST00000641023 NIT1Q86X76 327 aa12.9□□□□□ -0.34
PHGDH-208ENST00000641023 TCF21O43680 179 aa12.89□□□□□ -0.35
PHGDH-208ENST00000641023 PMCHP20382 165 aa12.89□□□□□ -0.35
PHGDH-208ENST00000641023 S100A4P26447 101 aaKnown RBP12.89□□□□□ -0.35
PHGDH-208ENST00000641023 ANXA2RQ3ZCQ2 193 aa12.89□□□□□ -0.35
PHGDH-208ENST00000641023 MSRB1Q9NZV6 116 aa12.89□□□□□ -0.35
PHGDH-208ENST00000641023 PCP4L1A6NKN8 68 aa12.89□□□□□ -0.35
PHGDH-208ENST00000641023 TSPOP30536 169 aa12.89□□□□□ -0.35
PHGDH-208ENST00000641023 ASIPP42127 132 aa12.89□□□□□ -0.35
PHGDH-208ENST00000641023 PROK1P58294 105 aa12.89□□□□□ -0.35
PHGDH-208ENST00000641023 CACNG7P62955 275 aa12.89□□□□□ -0.35
PHGDH-208ENST00000641023 SPANXN1Q5VSR9 72 aa12.89□□□□□ -0.35
PHGDH-208ENST00000641023 DMRTA1Q5VZB9 504 aa12.89□□□□□ -0.35
PHGDH-208ENST00000641023 RNASEKQ6P5S7 137 aaKnown RBP12.89□□□□□ -0.35
PHGDH-208ENST00000641023 IGKV3-20P01619 116 aa12.88□□□□□ -0.35
PHGDH-208ENST00000641023 SMIM15Q7Z3B0 74 aa12.88□□□□□ -0.35
PHGDH-208ENST00000641023 ORMDL3Q8N138 153 aa12.88□□□□□ -0.35
PHGDH-208ENST00000641023 OR10AG1Q8NH19 301 aa12.88□□□□□ -0.35
PHGDH-208ENST00000641023 CHCHD1Q96BP2 118 aaKnown RBP12.88□□□□□ -0.35
PHGDH-208ENST00000641023 IGHV4-4A0A075B6R2 117 aa12.87□□□□□ -0.35
PHGDH-208ENST00000641023 D6R8Y8 96 aa12.87□□□□□ -0.35
PHGDH-208ENST00000641023 H3BVH4 76 aa12.87□□□□□ -0.35
PHGDH-208ENST00000641023 CDKN1BP46527 198 aa12.87□□□□□ -0.35
PHGDH-208ENST00000641023 CD300EQ496F6 205 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-208ENST00000641023 FAM159AQ6UWV7 190 aa12.87□□□□□ -0.35
PHGDH-208ENST00000641023 SIGLEC8Q9NYZ4 499 aa12.87□□□□□ -0.35
PHGDH-208ENST00000641023 C7orf71A4D174 169 aa12.87□□□□□ -0.35
PHGDH-208ENST00000641023 OR4C46A6NHA9 309 aa12.87□□□□□ -0.35
PHGDH-208ENST00000641023 LINC00614P0C842 121 aa12.87□□□□□ -0.35
PHGDH-208ENST00000641023 DEFB131AP59861 70 aa12.87□□□□□ -0.35
PHGDH-208ENST00000641023 MRPL51Q4U2R6 128 aaKnown RBP12.87□□□□□ -0.35
PHGDH-208ENST00000641023 FAM19A2Q8N3H0 131 aa12.87□□□□□ -0.35
PHGDH-208ENST00000641023 SPAG8Q99932 426 aaPredicted RBP12.87□□□□□ -0.35
PHGDH-208ENST00000641023 TRAV25A0A0B4J276 109 aa12.86□□□□□ -0.35
PHGDH-208ENST00000641023 CKS2P33552 79 aa12.86□□□□□ -0.35
PHGDH-208ENST00000641023 Q6ZWC4 215 aa12.86□□□□□ -0.35
PHGDH-208ENST00000641023 U3KQK5 164 aa12.86□□□□□ -0.35
PHGDH-208ENST00000641023 TRAV12-3A0A0B4J271 114 aa12.85□□□□□ -0.35
PHGDH-208ENST00000641023 MED14OSP0DP75 135 aa12.85□□□□□ -0.35
PHGDH-208ENST00000641023 URB1-AS1Q96HZ7 61 aa12.85□□□□□ -0.35
PHGDH-208ENST00000641023 PRELID3AQ96N28 172 aa12.85□□□□□ -0.35
PHGDH-208ENST00000641023 SETD2Q9BYW2 2564 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-208ENST00000641023 SCGB1D1O95968 90 aa12.85□□□□□ -0.35
PHGDH-208ENST00000641023 PPBPP02775 128 aa12.85□□□□□ -0.35
PHGDH-208ENST00000641023 RAB4AP20338 218 aa12.85□□□□□ -0.35
PHGDH-208ENST00000641023 CDPF1Q6NVV7 123 aa12.85□□□□□ -0.35
PHGDH-208ENST00000641023 TIMM8BQ9Y5J9 83 aaPredicted RBP12.85□□□□□ -0.35
PHGDH-208ENST00000641023 M0R2Z0 102 aa12.84□□□□□ -0.35
PHGDH-208ENST00000641023 GNRH2O43555 120 aa12.84□□□□□ -0.35
PHGDH-208ENST00000641023 PHLDA3Q9Y5J5 127 aa12.84□□□□□ -0.35
PHGDH-208ENST00000641023 HLA-DRB4P13762 266 aa12.84□□□□□ -0.35
PHGDH-208ENST00000641023 S100A12P80511 92 aa12.84□□□□□ -0.35
PHGDH-208ENST00000641023 SPINK13Q1W4C9 94 aa12.84□□□□□ -0.35
PHGDH-208ENST00000641023 HLA-DRB4X5D2U9 266 aa12.84□□□□□ -0.35
PHGDH-208ENST00000641023 TRAV12-2A0A075B6T6 113 aa12.83□□□□□ -0.36
PHGDH-208ENST00000641023 EVI2AP22794 236 aa12.83□□□□□ -0.36
PHGDH-208ENST00000641023 PRSS3P2Q8NHM4 247 aa12.83□□□□□ -0.36
PHGDH-208ENST00000641023 RNF185Q96GF1 192 aa12.83□□□□□ -0.36
PHGDH-208ENST00000641023 SORL1Q92673 2214 aa12.83□□□□□ -0.36
PHGDH-208ENST00000641023 KNCNA6PVL3 124 aa12.82□□□□□ -0.36
PHGDH-208ENST00000641023 TDRG1Q3Y452 100 aa12.82□□□□□ -0.36
PHGDH-208ENST00000641023 AMTNQ6UX39 209 aa12.82□□□□□ -0.36
PHGDH-208ENST00000641023 MAP6D1Q9H9H5 199 aa12.82□□□□□ -0.36
PHGDH-208ENST00000641023 SCRT2Q9NQ03 307 aa12.82□□□□□ -0.36
PHGDH-208ENST00000641023 NSUN5P1Q3KNT7 163 aa12.82□□□□□ -0.36
PHGDH-208ENST00000641023 GSN-AS1Q9NRJ2 163 aa12.82□□□□□ -0.36
PHGDH-208ENST00000641023 ZNF256Q9Y2P7 627 aaPredicted RBP12.82□□□□□ -0.36
PHGDH-208ENST00000641023 H3BMM0 161 aa12.81□□□□□ -0.36
PHGDH-208ENST00000641023 M0R381 172 aa12.81□□□□□ -0.36
PHGDH-208ENST00000641023 CRLF1O75462 422 aa12.81□□□□□ -0.36
PHGDH-208ENST00000641023 CD7P09564 240 aa12.81□□□□□ -0.36
PHGDH-208ENST00000641023 RNASE3P12724 160 aaKnown RBP12.81□□□□□ -0.36
PHGDH-208ENST00000641023 AP5S1Q9NUS5 200 aa12.81□□□□□ -0.36
PHGDH-208ENST00000641023 LAMTOR2Q9Y2Q5 125 aa12.81□□□□□ -0.36
PHGDH-208ENST00000641023 ADARB2-AS1A8MUL3 147 aa12.81□□□□□ -0.36
PHGDH-208ENST00000641023 KRTDAPP60985 99 aa12.81□□□□□ -0.36
PHGDH-208ENST00000641023 FA2HQ7L5A8 372 aa12.81□□□□□ -0.36
PHGDH-208ENST00000641023 NDUFA11Q86Y39 141 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms