RNA–Protein interactions for RNA: ENST00000640735.1

PAX6-277, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-277ENST00000640735 LOXL1Q08397 574 aaPredicted RBP11.59□□□□□ -0.55
PAX6-277ENST00000640735 ERCC8Q13216 396 aa11.59□□□□□ -0.55
PAX6-277ENST00000640735 KIR3DS1Q14943 382 aa11.59□□□□□ -0.55
PAX6-277ENST00000640735 TWIST1Q15672 202 aa11.59□□□□□ -0.55
PAX6-277ENST00000640735 RNF185Q96GF1 192 aa11.59□□□□□ -0.55
PAX6-277ENST00000640735 ANKRD17O75179 2603 aaKnown RBP11.59□□□□□ -0.55
PAX6-277ENST00000640735 IGHV3OR16-8A0A075B7F1 116 aa11.59□□□□□ -0.55
PAX6-277ENST00000640735 TRAV8-2A0A0B4J237 113 aa11.59□□□□□ -0.55
PAX6-277ENST00000640735 PPBPP02775 128 aa11.59□□□□□ -0.55
PAX6-277ENST00000640735 HIST1H1AQ02539 215 aaPredicted RBP11.59□□□□□ -0.55
PAX6-277ENST00000640735 PMCHL2Q9BQD1 86 aa11.59□□□□□ -0.55
PAX6-277ENST00000640735 COX11Q9Y6N1 276 aa11.59□□□□□ -0.55
PAX6-277ENST00000640735 POLQO75417 2590 aa11.59□□□□□ -0.55
PAX6-277ENST00000640735 PDZD2O15018 2839 aa11.58□□□□□ -0.56
PAX6-277ENST00000640735 TMEM238C9JI98 176 aa11.58□□□□□ -0.56
PAX6-277ENST00000640735 NCR2O95944 276 aa11.58□□□□□ -0.56
PAX6-277ENST00000640735 VAMP3Q15836 100 aa11.58□□□□□ -0.56
PAX6-277ENST00000640735 LGALS9BQ3B8N2 356 aa11.58□□□□□ -0.56
PAX6-277ENST00000640735 LGALS9CQ6DKI2 356 aa11.58□□□□□ -0.56
PAX6-277ENST00000640735 METTL26Q96S19 204 aa11.58□□□□□ -0.56
PAX6-277ENST00000640735 MCRIP2Q9BUT9 160 aaKnown RBP11.58□□□□□ -0.56
PAX6-277ENST00000640735 ITPR2Q14571 2701 aa11.58□□□□□ -0.56
PAX6-277ENST00000640735 NPYP01303 97 aa11.58□□□□□ -0.56
PAX6-277ENST00000640735 ORM1P02763 201 aa11.58□□□□□ -0.56
PAX6-277ENST00000640735 CKS2P33552 79 aa11.58□□□□□ -0.56
PAX6-277ENST00000640735 HERV-K104P63124 156 aa11.58□□□□□ -0.56
PAX6-277ENST00000640735 ATP5G2Q06055 141 aa11.58□□□□□ -0.56
PAX6-277ENST00000640735 AGPAT4-IT1Q9H0P7 198 aa11.58□□□□□ -0.56
PAX6-277ENST00000640735 MOB4Q9Y3A3 225 aa11.58□□□□□ -0.56
PAX6-277ENST00000640735 MED13LQ71F56 2210 aa11.57□□□□□ -0.56
PAX6-277ENST00000640735 LOC389332A0A1B0GUA5 103 aa11.57□□□□□ -0.56
PAX6-277ENST00000640735 FAM223BA6NKX1 122 aa11.57□□□□□ -0.56
PAX6-277ENST00000640735 HBDP02042 147 aa11.57□□□□□ -0.56
PAX6-277ENST00000640735 COX8AP10176 69 aa11.57□□□□□ -0.56
PAX6-277ENST00000640735 FAM223AQ8IWN6 122 aa11.57□□□□□ -0.56
PAX6-277ENST00000640735 PIFOQ8TCI5 191 aa11.57□□□□□ -0.56
PAX6-277ENST00000640735 SPG11Q96JI7 2443 aa11.57□□□□□ -0.56
PAX6-277ENST00000640735 C9orf47Q6ZRZ4 202 aa11.56□□□□□ -0.56
PAX6-277ENST00000640735 RNF182Q8N6D2 247 aa11.56□□□□□ -0.56
PAX6-277ENST00000640735 ZNF738Q8NE65 137 aa11.56□□□□□ -0.56
PAX6-277ENST00000640735 TSSC4Q9Y5U2 329 aaPredicted RBP11.56□□□□□ -0.56
PAX6-277ENST00000640735 TRAV41A0A0B4J266 112 aa11.56□□□□□ -0.56
PAX6-277ENST00000640735 MUC21A0A0G2JKD1 596 aa11.56□□□□□ -0.56
PAX6-277ENST00000640735 MUC21A0A140T8X8 626 aa11.56□□□□□ -0.56
PAX6-277ENST00000640735 TCF21O43680 179 aa11.56□□□□□ -0.56
PAX6-277ENST00000640735 MUC21Q5SSG8 566 aa11.56□□□□□ -0.56
PAX6-277ENST00000640735 BVES-AS1Q5T3Y7 98 aa11.56□□□□□ -0.56
PAX6-277ENST00000640735 MEGF9Q9H1U4 602 aa11.56□□□□□ -0.56
PAX6-277ENST00000640735 IGHV1-69DA0A0B4J2H0 117 aa11.55□□□□□ -0.56
PAX6-277ENST00000640735 IGKV3D-20A0A0C4DH25 116 aa11.55□□□□□ -0.56
PAX6-277ENST00000640735 IGHV1-69P01742 117 aa11.55□□□□□ -0.56
PAX6-277ENST00000640735 MPV17L2Q567V2 206 aa11.55□□□□□ -0.56
PAX6-277ENST00000640735 C12orf54Q6X4T0 127 aa11.55□□□□□ -0.56
PAX6-277ENST00000640735 OR1N2Q8NGR9 330 aa11.55□□□□□ -0.56
PAX6-277ENST00000640735 MSRB1Q9NZV6 116 aa11.55□□□□□ -0.56
PAX6-277ENST00000640735 TP73-AS1Q9UF72 201 aa11.55□□□□□ -0.56
PAX6-277ENST00000640735 SMKR1H3BMG3 65 aa11.55□□□□□ -0.56
PAX6-277ENST00000640735 FOXC2Q99958 501 aa11.55□□□□□ -0.56
PAX6-277ENST00000640735 FLNBO75369 2602 aaKnown RBP11.54□□□□□ -0.56
PAX6-277ENST00000640735 C11orf21Q9P2W6 132 aa11.54□□□□□ -0.56
PAX6-277ENST00000640735 TIMM8BQ9Y5J9 83 aaPredicted RBP11.54□□□□□ -0.56
PAX6-277ENST00000640735 NAV2Q8IVL1 2488 aa11.53□□□□□ -0.56
PAX6-277ENST00000640735 IGHV3-66A0A0C4DH42 116 aa11.53□□□□□ -0.56
PAX6-277ENST00000640735 NUDT3O95989 172 aa11.53□□□□□ -0.56
PAX6-277ENST00000640735 DSCR9P59020 149 aa11.53□□□□□ -0.56
PAX6-277ENST00000640735 C2orf91Q6ZV80 131 aa11.53□□□□□ -0.56
PAX6-277ENST00000640735 DEFB125Q8N687 156 aa11.53□□□□□ -0.56
PAX6-277ENST00000640735 OR8A1Q8NGG7 326 aa11.53□□□□□ -0.56
PAX6-277ENST00000640735 C10orf105Q8TEF2 133 aa11.53□□□□□ -0.56
PAX6-277ENST00000640735 MAP1LC3AQ9H492 121 aa11.53□□□□□ -0.56
PAX6-277ENST00000640735 IGHV4-4A0A075B6R2 117 aa11.53□□□□□ -0.56
PAX6-277ENST00000640735 H3BS24 57 aa11.53□□□□□ -0.56
PAX6-277ENST00000640735 IGF1P05019 195 aa11.53□□□□□ -0.56
PAX6-277ENST00000640735 FGF6P10767 208 aa11.53□□□□□ -0.56
PAX6-277ENST00000640735 UBE2V1Q13404 147 aa11.53□□□□□ -0.56
PAX6-277ENST00000640735 TMEM78Q5T7P6 136 aa11.53□□□□□ -0.56
PAX6-277ENST00000640735 LENEPQ9Y5L5 61 aa11.53□□□□□ -0.56
PAX6-277ENST00000640735 CSMD1Q96PZ7 3565 aa11.53□□□□□ -0.56
PAX6-277ENST00000640735 TMEM219Q86XT9 240 aa11.52□□□□□ -0.57
PAX6-277ENST00000640735 KRTAP1-3Q8IUG1 177 aa11.52□□□□□ -0.57
PAX6-277ENST00000640735 IFI27L1Q96BM0 104 aa11.52□□□□□ -0.57
PAX6-277ENST00000640735 NXT2Q9NPJ8 142 aaKnown RBP11.52□□□□□ -0.57
PAX6-277ENST00000640735 IGHV4-30-2A0A087WSY4 118 aa11.51□□□□□ -0.57
PAX6-277ENST00000640735 H3BUA1 57 aa11.51□□□□□ -0.57
PAX6-277ENST00000640735 CD164L2Q6UWJ8 174 aa11.51□□□□□ -0.57
PAX6-277ENST00000640735 C9orf139Q6ZV77 190 aa11.51□□□□□ -0.57
PAX6-277ENST00000640735 IGHV3OR16-13A0A075B7E8 117 aa11.51□□□□□ -0.57
PAX6-277ENST00000640735 IGHV3-74A0A0B4J1X5 117 aa11.51□□□□□ -0.57
PAX6-277ENST00000640735 IGHV7-4-1A0A0J9YVY3 117 aa11.51□□□□□ -0.57
PAX6-277ENST00000640735 TAX1BP3O14907 124 aa11.51□□□□□ -0.57
PAX6-277ENST00000640735 CCL25O15444 150 aa11.51□□□□□ -0.57
PAX6-277ENST00000640735 Q6ZVH6 145 aa11.51□□□□□ -0.57
PAX6-277ENST00000640735 SETXQ7Z333 2677 aaKnown RBP11.5□□□□□ -0.57
PAX6-277ENST00000640735 CYSRT1A8MQ03 144 aa11.5□□□□□ -0.57
PAX6-277ENST00000640735 M0QXV9 152 aa11.5□□□□□ -0.57
PAX6-277ENST00000640735 VCYO14598 125 aa11.5□□□□□ -0.57
PAX6-277ENST00000640735 ZNF207O43670 478 aaKnown RBP11.5□□□□□ -0.57
PAX6-277ENST00000640735 FCER1GP30273 86 aa11.5□□□□□ -0.57
PAX6-277ENST00000640735 Q96MF0 132 aa11.5□□□□□ -0.57
PAX6-277ENST00000640735 IGLV2-18A0A075B6J9 118 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms