RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 DTX2Q86UW9 622 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 RNF182Q8N6D2 247 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 NPFFR1Q9GZQ6 430 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 FASNP49327 2511 aaKnown RBP4.36□□□□□ -1.71
SCN3A-210ENST00000640652 WT1P19544 449 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-210ENST00000640652 C7orf69Q9H7B7 122 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 NPFFO15130 113 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 ATP5J2P56134 94 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 FBXL19-AS1Q494R0 122 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 FAM74A4Q5TZK3 123 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 CNFNQ9BYD5 112 aa4.36□□□□□ -1.71
SCN3A-210ENST00000640652 ATP6V0E1O15342 81 aa4.35□□□□□ -1.71
SCN3A-210ENST00000640652 CEND1Q8N111 149 aa4.35□□□□□ -1.71
SCN3A-210ENST00000640652 SMIM2Q9BVW6 85 aa4.35□□□□□ -1.71
SCN3A-210ENST00000640652 UTP20O75691 2785 aaKnown RBP4.35□□□□□ -1.71
SCN3A-210ENST00000640652 DYNAPQ8N1N2 210 aa4.35□□□□□ -1.71
SCN3A-210ENST00000640652 HOXA3O43365 443 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-210ENST00000640652 NPYP01303 97 aa4.35□□□□□ -1.71
SCN3A-210ENST00000640652 ZNF815PA8K554 130 aa4.35□□□□□ -1.71
SCN3A-210ENST00000640652 CTSGP08311 255 aa4.35□□□□□ -1.71
SCN3A-210ENST00000640652 PLA2G5P39877 138 aa4.35□□□□□ -1.71
SCN3A-210ENST00000640652 TMEM170BQ5T4T1 132 aa4.35□□□□□ -1.71
SCN3A-210ENST00000640652 SIGMAR1Q99720 223 aa4.35□□□□□ -1.71
SCN3A-210ENST00000640652 IGKV3-7A0A075B6H7 116 aa4.35□□□□□ -1.71
SCN3A-210ENST00000640652 ODF3BA8MYP8 253 aa4.35□□□□□ -1.71
SCN3A-210ENST00000640652 TMEM238C9JI98 176 aa4.35□□□□□ -1.71
SCN3A-210ENST00000640652 LINC00322Q6ZN03 302 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-210ENST00000640652 GTSCR1Q86UQ5 136 aa4.35□□□□□ -1.71
SCN3A-210ENST00000640652 Q8N976 141 aa4.35□□□□□ -1.71
SCN3A-210ENST00000640652 H3BUA1 57 aa4.35□□□□□ -1.71
SCN3A-210ENST00000640652 COX6CP09669 75 aa4.35□□□□□ -1.71
SCN3A-210ENST00000640652 TMEM141Q96I45 108 aa4.35□□□□□ -1.71
SCN3A-210ENST00000640652 CD7P09564 240 aa4.34□□□□□ -1.71
SCN3A-210ENST00000640652 CIRBPQ14011 172 aaKnown RBP4.34□□□□□ -1.71
SCN3A-210ENST00000640652 PRR30Q53SZ7 412 aaPredicted RBP4.34□□□□□ -1.71
SCN3A-210ENST00000640652 GATD1Q8NB37 220 aa4.34□□□□□ -1.71
SCN3A-210ENST00000640652 C17orf77Q96MU5 243 aa4.34□□□□□ -1.71
SCN3A-210ENST00000640652 A0A1B0GWB2 263 aa4.34□□□□□ -1.71
SCN3A-210ENST00000640652 TMEM262E9PQX1 116 aa4.34□□□□□ -1.71
SCN3A-210ENST00000640652 TAX1BP3O14907 124 aa4.34□□□□□ -1.71
SCN3A-210ENST00000640652 BUB3O43684 328 aa4.34□□□□□ -1.71
SCN3A-210ENST00000640652 MCRIP2Q9BUT9 160 aaKnown RBP4.34□□□□□ -1.71
SCN3A-210ENST00000640652 LY6LH3BQJ8 138 aa4.34□□□□□ -1.71
SCN3A-210ENST00000640652 NDUFA4O00483 81 aa4.34□□□□□ -1.71
SCN3A-210ENST00000640652 KHDC1LQ5JSQ8 128 aa4.34□□□□□ -1.71
SCN3A-210ENST00000640652 TRBV20-1A0A075B6N2 111 aa4.34□□□□□ -1.71
SCN3A-210ENST00000640652 A0A087WX48 190 aa4.34□□□□□ -1.71
SCN3A-210ENST00000640652 VCYO14598 125 aa4.34□□□□□ -1.71
SCN3A-210ENST00000640652 FXYD7P58549 80 aa4.34□□□□□ -1.71
SCN3A-210ENST00000640652 MYMXA0A1B0GTQ4 84 aa4.34□□□□□ -1.72
SCN3A-210ENST00000640652 ERCC8Q13216 396 aa4.34□□□□□ -1.72
SCN3A-210ENST00000640652 ODF1Q14990 250 aa4.34□□□□□ -1.72
SCN3A-210ENST00000640652 C9orf47Q6ZRZ4 202 aa4.34□□□□□ -1.72
SCN3A-210ENST00000640652 LINC00173Q6ZV60 143 aa4.34□□□□□ -1.72
SCN3A-210ENST00000640652 TEX29Q8N6K0 151 aa4.34□□□□□ -1.72
SCN3A-210ENST00000640652 IGHV7-81A0A0B4J1V7 117 aa4.34□□□□□ -1.72
SCN3A-210ENST00000640652 NBL1P41271 181 aa4.34□□□□□ -1.72
SCN3A-210ENST00000640652 TRGV11A0A075B6L2 103 aa4.33□□□□□ -1.72
SCN3A-210ENST00000640652 RIPPLY3P57055 190 aa4.33□□□□□ -1.72
SCN3A-210ENST00000640652 DGAT2L7PQ6IED9 249 aa4.33□□□□□ -1.72
SCN3A-210ENST00000640652 C14orf178Q8N769 122 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-210ENST00000640652 NDUFS8O00217 210 aa4.33□□□□□ -1.72
SCN3A-210ENST00000640652 TRAV12-1A0A0B4J245 112 aa4.33□□□□□ -1.72
SCN3A-210ENST00000640652 TRAV40A0A0B4J280 105 aa4.33□□□□□ -1.72
SCN3A-210ENST00000640652 LY6G5BQ8NDX9 201 aa4.33□□□□□ -1.72
SCN3A-210ENST00000640652 RNASE8Q8TDE3 154 aaKnown RBP4.33□□□□□ -1.72
SCN3A-210ENST00000640652 ZNF418Q8TF45 676 aaPredicted RBP4.33□□□□□ -1.72
SCN3A-210ENST00000640652 GATA3P23771 443 aa4.33□□□□□ -1.72
SCN3A-210ENST00000640652 PPIFP30405 207 aaKnown RBP4.33□□□□□ -1.72
SCN3A-210ENST00000640652 NDPQ00604 133 aa4.33□□□□□ -1.72
SCN3A-210ENST00000640652 CSTL1Q9H114 145 aa4.33□□□□□ -1.72
SCN3A-210ENST00000640652 DKK2Q9UBU2 259 aa4.33□□□□□ -1.72
SCN3A-210ENST00000640652 LY6HO94772 140 aa4.33□□□□□ -1.72
SCN3A-210ENST00000640652 PCP2Q8IVA1 136 aa4.33□□□□□ -1.72
SCN3A-210ENST00000640652 DYNLRB2Q8TF09 96 aa4.33□□□□□ -1.72
SCN3A-210ENST00000640652 MRPL35Q9NZE8 188 aaKnown RBP4.33□□□□□ -1.72
SCN3A-210ENST00000640652 TRBV25-1A0A075B6N4 114 aa4.33□□□□□ -1.72
SCN3A-210ENST00000640652 SCGB1A1P11684 91 aa4.33□□□□□ -1.72
SCN3A-210ENST00000640652 TMEM219Q86XT9 240 aa4.33□□□□□ -1.72
SCN3A-210ENST00000640652 ADAMTSL5Q6ZMM2 481 aa4.32□□□□□ -1.72
SCN3A-210ENST00000640652 GEMIN7Q9H840 131 aaKnown RBP4.32□□□□□ -1.72
SCN3A-210ENST00000640652 ZANQ9Y493 2812 aa4.32□□□□□ -1.72
SCN3A-210ENST00000640652 LY6EQ16553 131 aa4.32□□□□□ -1.72
SCN3A-210ENST00000640652 C22orf34Q6ZV56 151 aa4.32□□□□□ -1.72
SCN3A-210ENST00000640652 KMT2BQ9UMN6 2715 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-210ENST00000640652 TNFRSF13BO14836 293 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-210ENST00000640652 C2orf66Q6UXQ4 117 aa4.32□□□□□ -1.72
SCN3A-210ENST00000640652 TRBV7-9A0A0J9YWB2 115 aa4.32□□□□□ -1.72
SCN3A-210ENST00000640652 PMVKQ15126 192 aa4.32□□□□□ -1.72
SCN3A-210ENST00000640652 RNF114Q9Y508 228 aa4.32□□□□□ -1.72
SCN3A-210ENST00000640652 HELZ2Q9BYK8 2649 aaKnown RBP4.32□□□□□ -1.72
SCN3A-210ENST00000640652 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-210ENST00000640652 Q8NA96 180 aa4.32□□□□□ -1.72
SCN3A-210ENST00000640652 DUSP14O95147 198 aaKnown RBP4.32□□□□□ -1.72
SCN3A-210ENST00000640652 DSCR9P59020 149 aa4.32□□□□□ -1.72
SCN3A-210ENST00000640652 COX8CQ7Z4L0 72 aa4.32□□□□□ -1.72
SCN3A-210ENST00000640652 FANCD2OSQ96PS1 177 aa4.32□□□□□ -1.72
SCN3A-210ENST00000640652 MSRB2Q9Y3D2 182 aa4.32□□□□□ -1.72
SCN3A-210ENST00000640652 TNFRSF18Q9Y5U5 241 aa4.32□□□□□ -1.72
SCN3A-210ENST00000640652 MUC3AQ02505 3323 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms