RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 ATP5G1P05496 136 aa8.62□□□□□ -1.03
SCN1B-208ENST00000640135 CTSGP08311 255 aa8.62□□□□□ -1.03
SCN1B-208ENST00000640135 PMVKQ15126 192 aa8.62□□□□□ -1.03
SCN1B-208ENST00000640135 C16orf54Q6UWD8 224 aa8.62□□□□□ -1.03
SCN1B-208ENST00000640135 IGF2BP2-AS1Q96M15 143 aa8.62□□□□□ -1.03
SCN1B-208ENST00000640135 C11orf68Q9H3H3 251 aaKnown RBP8.62□□□□□ -1.03
SCN1B-208ENST00000640135 TMEM213A2RRL7 107 aa8.62□□□□□ -1.03
SCN1B-208ENST00000640135 IL15RAQ13261 267 aa8.62□□□□□ -1.03
SCN1B-208ENST00000640135 TTC32Q5I0X7 151 aa8.62□□□□□ -1.03
SCN1B-208ENST00000640135 LYPD6Q86Y78 171 aa8.62□□□□□ -1.03
SCN1B-208ENST00000640135 AGPAT4-IT1Q9H0P7 198 aa8.62□□□□□ -1.03
SCN1B-208ENST00000640135 SYS1-DBNDD2H3BUS1 97 aa8.61□□□□□ -1.03
SCN1B-208ENST00000640135 ZC2HC1BQ5TFG8 222 aa8.61□□□□□ -1.03
SCN1B-208ENST00000640135 SMKR1H3BMG3 65 aa8.61□□□□□ -1.03
SCN1B-208ENST00000640135 MRPL23Q16540 153 aaKnown RBP8.61□□□□□ -1.03
SCN1B-208ENST00000640135 CCL18P55774 89 aa8.61□□□□□ -1.03
SCN1B-208ENST00000640135 DLX4Q92988 240 aaPredicted RBP8.61□□□□□ -1.03
SCN1B-208ENST00000640135 SMAD5-AS1Q9Y6J3 95 aa8.61□□□□□ -1.03
SCN1B-208ENST00000640135 PLCE1Q9P212 2302 aa8.61□□□□□ -1.03
SCN1B-208ENST00000640135 IGKV1-17P01599 117 aa8.61□□□□□ -1.03
SCN1B-208ENST00000640135 MRAPQ8TCY5 172 aa8.61□□□□□ -1.03
SCN1B-208ENST00000640135 MEGF9Q9H1U4 602 aa8.61□□□□□ -1.03
SCN1B-208ENST00000640135 C2orf70A6NJV1 201 aa8.6□□□□□ -1.03
SCN1B-208ENST00000640135 KLF5Q13887 457 aaPredicted RBP8.6□□□□□ -1.03
SCN1B-208ENST00000640135 ZNF48Q96MX3 618 aaPredicted RBP8.6□□□□□ -1.03
SCN1B-208ENST00000640135 LINC00574Q9H8X3 128 aa8.6□□□□□ -1.03
SCN1B-208ENST00000640135 CDK2AP2O75956 126 aa8.6□□□□□ -1.03
SCN1B-208ENST00000640135 LTAP01374 205 aa8.6□□□□□ -1.03
SCN1B-208ENST00000640135 DNAJC30Q96LL9 226 aa8.6□□□□□ -1.03
SCN1B-208ENST00000640135 C20orf144Q9BQM9 153 aa8.6□□□□□ -1.03
SCN1B-208ENST00000640135 NOP10Q9NPE3 64 aaKnown RBP8.6□□□□□ -1.03
SCN1B-208ENST00000640135 U3KQE9 123 aa8.6□□□□□ -1.03
SCN1B-208ENST00000640135 BUB3O43684 328 aa8.6□□□□□ -1.03
SCN1B-208ENST00000640135 HLA-DRB4P13762 266 aa8.6□□□□□ -1.03
SCN1B-208ENST00000640135 SMIM2Q9BVW6 85 aa8.6□□□□□ -1.03
SCN1B-208ENST00000640135 HLA-DRB4X5D2U9 266 aa8.6□□□□□ -1.03
SCN1B-208ENST00000640135 SONP18583 2426 aaKnown RBP8.6□□□□□ -1.03
SCN1B-208ENST00000640135 TSPAN13O95857 204 aa8.59□□□□□ -1.03
SCN1B-208ENST00000640135 ZNF726P1Q15940 193 aa8.59□□□□□ -1.03
SCN1B-208ENST00000640135 NDUFA11Q86Y39 141 aa8.59□□□□□ -1.03
SCN1B-208ENST00000640135 MTURNQ8N3F0 131 aa8.59□□□□□ -1.03
SCN1B-208ENST00000640135 CHAC1Q9BUX1 264 aa8.59□□□□□ -1.03
SCN1B-208ENST00000640135 PLXNB3Q9ULL4 1909 aa8.59□□□□□ -1.03
SCN1B-208ENST00000640135 IGHV4OR15-8A0A075B7B6 117 aa8.59□□□□□ -1.03
SCN1B-208ENST00000640135 A0A087WW49 117 aa8.59□□□□□ -1.03
SCN1B-208ENST00000640135 DNAJC9-AS1A6NH13 148 aa8.59□□□□□ -1.03
SCN1B-208ENST00000640135 C19orf84I3L1E1 186 aa8.59□□□□□ -1.03
SCN1B-208ENST00000640135 GAGE6Q13070 117 aa8.59□□□□□ -1.03
SCN1B-208ENST00000640135 NKAPP1Q8N9T2 125 aa8.59□□□□□ -1.03
SCN1B-208ENST00000640135 HERVK_113P63121 156 aa8.59□□□□□ -1.03
SCN1B-208ENST00000640135 ZC2HC1AQ96GY0 325 aa8.59□□□□□ -1.03
SCN1B-208ENST00000640135 ZNF479Q96JC4 524 aa8.59□□□□□ -1.03
SCN1B-208ENST00000640135 C10orf142B7Z368 130 aa8.59□□□□□ -1.04
SCN1B-208ENST00000640135 ANGP03950 147 aaKnown RBP8.59□□□□□ -1.04
SCN1B-208ENST00000640135 MSMPQ1L6U9 139 aa8.59□□□□□ -1.04
SCN1B-208ENST00000640135 MAJINQ3KP22 176 aa8.59□□□□□ -1.04
SCN1B-208ENST00000640135 MRPL51Q4U2R6 128 aaKnown RBP8.59□□□□□ -1.04
SCN1B-208ENST00000640135 DYNAPQ8N1N2 210 aa8.59□□□□□ -1.04
SCN1B-208ENST00000640135 ZNF664Q8N3J9 261 aa8.59□□□□□ -1.04
SCN1B-208ENST00000640135 GATD1Q8NB37 220 aa8.59□□□□□ -1.04
SCN1B-208ENST00000640135 ADAMTS9Q9P2N4 1935 aa8.58□□□□□ -1.04
SCN1B-208ENST00000640135 SMIM27A0A1W2PRY6 76 aa8.58□□□□□ -1.04
SCN1B-208ENST00000640135 H3BUT2 72 aa8.58□□□□□ -1.04
SCN1B-208ENST00000640135 WISP2O76076 250 aa8.58□□□□□ -1.04
SCN1B-208ENST00000640135 IGHV4-31P0DP07 118 aa8.58□□□□□ -1.04
SCN1B-208ENST00000640135 SFTA2Q6UW10 78 aa8.58□□□□□ -1.04
SCN1B-208ENST00000640135 C10orf126Q8N4M7 172 aa8.58□□□□□ -1.04
SCN1B-208ENST00000640135 KLK5Q9Y337 293 aaPredicted RBP8.58□□□□□ -1.04
SCN1B-208ENST00000640135 ICOSQ9Y6W8 199 aa8.58□□□□□ -1.04
SCN1B-208ENST00000640135 OBSL1O75147 1896 aa8.58□□□□□ -1.04
SCN1B-208ENST00000640135 CHD8Q9HCK8 2581 aa8.58□□□□□ -1.04
SCN1B-208ENST00000640135 C3orf79P0CE67 100 aa8.58□□□□□ -1.04
SCN1B-208ENST00000640135 V9GYV3 84 aa8.58□□□□□ -1.04
SCN1B-208ENST00000640135 CGB3P0DN86 165 aa8.57□□□□□ -1.04
SCN1B-208ENST00000640135 ODF3BA8MYP8 253 aa8.57□□□□□ -1.04
SCN1B-208ENST00000640135 CYYR1Q96J86 154 aa8.57□□□□□ -1.04
SCN1B-208ENST00000640135 KLF12Q9Y4X4 402 aa8.57□□□□□ -1.04
SCN1B-208ENST00000640135 NAV2Q8IVL1 2488 aa8.57□□□□□ -1.04
SCN1B-208ENST00000640135 IGLV2-23P01705 113 aa8.57□□□□□ -1.04
SCN1B-208ENST00000640135 SHISA2Q6UWI4 295 aa8.57□□□□□ -1.04
SCN1B-208ENST00000640135 TEX22C9J3V5 150 aa8.57□□□□□ -1.04
SCN1B-208ENST00000640135 ESDP10768 282 aa8.57□□□□□ -1.04
SCN1B-208ENST00000640135 Q6YL49 198 aa8.57□□□□□ -1.04
SCN1B-208ENST00000640135 SNHG12Q9BXW3 62 aa8.57□□□□□ -1.04
SCN1B-208ENST00000640135 IGHG4P01861 327 aa8.56□□□□□ -1.04
SCN1B-208ENST00000640135 C18orf32Q8TCD1 76 aa8.56□□□□□ -1.04
SCN1B-208ENST00000640135 CITED2Q99967 270 aaPredicted RBP8.56□□□□□ -1.04
SCN1B-208ENST00000640135 WI2-2373I1.2A0A1W2PRP0 233 aa8.56□□□□□ -1.04
SCN1B-208ENST00000640135 F6UB75 175 aa8.56□□□□□ -1.04
SCN1B-208ENST00000640135 C1orf43Q9BWL3 253 aa8.56□□□□□ -1.04
SCN1B-208ENST00000640135 LAMTOR3Q9UHA4 124 aa8.56□□□□□ -1.04
SCN1B-208ENST00000640135 APRG1Q8IVJ8 170 aa8.55□□□□□ -1.04
SCN1B-208ENST00000640135 PTPRSQ13332 1948 aa8.55□□□□□ -1.04
SCN1B-208ENST00000640135 WFDC11Q8NEX6 87 aa8.55□□□□□ -1.04
SCN1B-208ENST00000640135 DEFB104AQ8WTQ1 72 aa8.55□□□□□ -1.04
SCN1B-208ENST00000640135 SIGLEC8Q9NYZ4 499 aa8.55□□□□□ -1.04
SCN1B-208ENST00000640135 IGF1P05019 195 aa8.55□□□□□ -1.04
SCN1B-208ENST00000640135 ODF3L1Q8IXM7 274 aa8.55□□□□□ -1.04
SCN1B-208ENST00000640135 ZNF106Q9H2Y7 1883 aaKnown RBP8.54□□□□□ -1.04
SCN1B-208ENST00000640135 CGB7P0DN87 165 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms