RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 AJUBAQ96IF1 538 aa8.33□□□□□ -1.08
SNIP1-204ENST00000638725 GTSF1LQ9H1H1 148 aa8.33□□□□□ -1.08
SNIP1-204ENST00000638725 TLN1Q9Y490 2541 aaKnown RBP8.32□□□□□ -1.08
SNIP1-204ENST00000638725 M0R381 172 aa8.32□□□□□ -1.08
SNIP1-204ENST00000638725 TCF15Q12870 199 aa8.32□□□□□ -1.08
SNIP1-204ENST00000638725 EEF1AKMT3Q96AZ1 226 aa8.32□□□□□ -1.08
SNIP1-204ENST00000638725 MRAP2Q96G30 205 aa8.32□□□□□ -1.08
SNIP1-204ENST00000638725 C16orf92Q96LL3 132 aa8.32□□□□□ -1.08
SNIP1-204ENST00000638725 TSSC4Q9Y5U2 329 aaPredicted RBP8.32□□□□□ -1.08
SNIP1-204ENST00000638725 F8W1H4 67 aa8.32□□□□□ -1.08
SNIP1-204ENST00000638725 ETDBQ3ZM63 59 aa8.32□□□□□ -1.08
SNIP1-204ENST00000638725 RPL39LQ96EH5 51 aaKnown RBP8.32□□□□□ -1.08
SNIP1-204ENST00000638725 C20orf173Q96LM9 149 aa8.32□□□□□ -1.08
SNIP1-204ENST00000638725 SCGB3A1Q96QR1 104 aa8.32□□□□□ -1.08
SNIP1-204ENST00000638725 TRAV12-1A0A0B4J245 112 aa8.31□□□□□ -1.08
SNIP1-204ENST00000638725 OR11H12B2RN74 326 aa8.31□□□□□ -1.08
SNIP1-204ENST00000638725 KLK9Q2XQG4 91 aa8.31□□□□□ -1.08
SNIP1-204ENST00000638725 LCNL1Q6ZST4 164 aa8.31□□□□□ -1.08
SNIP1-204ENST00000638725 OR11H1Q8NG94 326 aa8.31□□□□□ -1.08
SNIP1-204ENST00000638725 OR11H2Q8NH07 326 aa8.31□□□□□ -1.08
SNIP1-204ENST00000638725 RASL10AQ92737 203 aa8.31□□□□□ -1.08
SNIP1-204ENST00000638725 HIF1ANQ9NWT6 349 aa8.31□□□□□ -1.08
SNIP1-204ENST00000638725 KLK9Q9UKQ9 250 aa8.31□□□□□ -1.08
SNIP1-204ENST00000638725 U3KQE9 123 aa8.31□□□□□ -1.08
SNIP1-204ENST00000638725 HRNRQ86YZ3 2850 aaPredicted RBP8.31□□□□□ -1.08
SNIP1-204ENST00000638725 MYMXA0A1B0GTQ4 84 aa8.31□□□□□ -1.08
SNIP1-204ENST00000638725 AZU1P20160 251 aa8.31□□□□□ -1.08
SNIP1-204ENST00000638725 SAA4P35542 130 aa8.31□□□□□ -1.08
SNIP1-204ENST00000638725 DEFB1P60022 68 aa8.31□□□□□ -1.08
SNIP1-204ENST00000638725 SUMO2P61956 95 aaKnown RBP8.31□□□□□ -1.08
SNIP1-204ENST00000638725 RRN3P1Q2M238 152 aa8.31□□□□□ -1.08
SNIP1-204ENST00000638725 CYSLTR1Q9Y271 337 aa8.31□□□□□ -1.08
SNIP1-204ENST00000638725 CLEC2AQ6UVW9 174 aa8.3□□□□□ -1.08
SNIP1-204ENST00000638725 NEXN-AS1Q8NBZ9 246 aa8.3□□□□□ -1.08
SNIP1-204ENST00000638725 TOMM6Q96B49 74 aa8.3□□□□□ -1.08
SNIP1-204ENST00000638725 LINC00527Q9UJ94 153 aa8.3□□□□□ -1.08
SNIP1-204ENST00000638725 K7ENP7 123 aa8.3□□□□□ -1.08
SNIP1-204ENST00000638725 ADORA2A-AS1P86434 159 aa8.3□□□□□ -1.08
SNIP1-204ENST00000638725 SMAGPQ0VAQ4 97 aa8.3□□□□□ -1.08
SNIP1-204ENST00000638725 ORMDL2Q53FV1 153 aa8.3□□□□□ -1.08
SNIP1-204ENST00000638725 C14orf178Q8N769 122 aaPredicted RBP8.3□□□□□ -1.08
SNIP1-204ENST00000638725 TRBV7-1A0A0A6YYK4 115 aa8.29□□□□□ -1.08
SNIP1-204ENST00000638725 LGALS1P09382 135 aaKnown RBP8.29□□□□□ -1.08
SNIP1-204ENST00000638725 UBE2E1P51965 193 aa8.29□□□□□ -1.08
SNIP1-204ENST00000638725 SPAG8Q99932 426 aaPredicted RBP8.29□□□□□ -1.08
SNIP1-204ENST00000638725 A0A1B0GWB2 263 aa8.29□□□□□ -1.08
SNIP1-204ENST00000638725 GAGE12HA6NDE8 117 aa8.29□□□□□ -1.08
SNIP1-204ENST00000638725 MGPP08493 103 aa8.29□□□□□ -1.08
SNIP1-204ENST00000638725 S100A4P26447 101 aaKnown RBP8.29□□□□□ -1.08
SNIP1-204ENST00000638725 ZFAND2AQ8N6M9 145 aa8.29□□□□□ -1.08
SNIP1-204ENST00000638725 GLMPQ8WWB7 406 aa8.29□□□□□ -1.08
SNIP1-204ENST00000638725 ITLN2Q8WWU7 325 aaPredicted RBP8.29□□□□□ -1.08
SNIP1-204ENST00000638725 SIGMAR1Q99720 223 aa8.29□□□□□ -1.08
SNIP1-204ENST00000638725 PRO0461Q9UI25 63 aa8.29□□□□□ -1.08
SNIP1-204ENST00000638725 ASH1LQ9NR48 2969 aaKnown RBP8.29□□□□□ -1.08
SNIP1-204ENST00000638725 CENPVL3A0A0U1RRI6 287 aa8.28□□□□□ -1.08
SNIP1-204ENST00000638725 RNF223E7ERA6 249 aa8.28□□□□□ -1.08
SNIP1-204ENST00000638725 ATP5G2Q06055 141 aa8.28□□□□□ -1.08
SNIP1-204ENST00000638725 FOXC1Q12948 553 aa8.28□□□□□ -1.08
SNIP1-204ENST00000638725 CD300EQ496F6 205 aaPredicted RBP8.28□□□□□ -1.08
SNIP1-204ENST00000638725 GAGE13Q4V321 117 aa8.28□□□□□ -1.08
SNIP1-204ENST00000638725 MORN3Q6PF18 240 aaPredicted RBP8.28□□□□□ -1.08
SNIP1-204ENST00000638725 C2orf66Q6UXQ4 117 aa8.28□□□□□ -1.08
SNIP1-204ENST00000638725 C9orf139Q6ZV77 190 aa8.28□□□□□ -1.08
SNIP1-204ENST00000638725 TMEM219Q86XT9 240 aa8.28□□□□□ -1.08
SNIP1-204ENST00000638725 BAALCQ8WXS3 180 aa8.28□□□□□ -1.08
SNIP1-204ENST00000638725 PRADC1Q9BSG0 188 aa8.28□□□□□ -1.08
SNIP1-204ENST00000638725 RAXQ9Y2V3 346 aa8.28□□□□□ -1.08
SNIP1-204ENST00000638725 A0A1W2PPR1 153 aa8.28□□□□□ -1.08
SNIP1-204ENST00000638725 INSL3P51460 131 aa8.28□□□□□ -1.08
SNIP1-204ENST00000638725 GPHB5Q86YW7 130 aa8.28□□□□□ -1.08
SNIP1-204ENST00000638725 DPH3P1Q9H4G8 78 aa8.28□□□□□ -1.08
SNIP1-204ENST00000638725 PTPRQQ9UMZ3 2332 aa8.28□□□□□ -1.08
SNIP1-204ENST00000638725 NBASA2RRP1 2371 aa8.28□□□□□ -1.08
SNIP1-204ENST00000638725 LINC01619G3V211 115 aa8.27□□□□□ -1.08
SNIP1-204ENST00000638725 J3QR89 54 aa8.27□□□□□ -1.08
SNIP1-204ENST00000638725 SLC25A16P16260 332 aa8.27□□□□□ -1.08
SNIP1-204ENST00000638725 ANXA2RQ3ZCQ2 193 aa8.27□□□□□ -1.08
SNIP1-204ENST00000638725 C5orf56Q8N8D9 126 aa8.27□□□□□ -1.08
SNIP1-204ENST00000638725 SPTA1P02549 2419 aa8.27□□□□□ -1.09
SNIP1-204ENST00000638725 PRSS29PA6NIE9 313 aa8.27□□□□□ -1.09
SNIP1-204ENST00000638725 ASIPP42127 132 aa8.27□□□□□ -1.09
SNIP1-204ENST00000638725 SCGB2A2Q13296 93 aa8.27□□□□□ -1.09
SNIP1-204ENST00000638725 UNQ9165/PRO28630Q6UXU0 137 aa8.27□□□□□ -1.09
SNIP1-204ENST00000638725 C20orf78Q9BR46 151 aa8.27□□□□□ -1.09
SNIP1-204ENST00000638725 PGPEP1Q9NXJ5 209 aa8.27□□□□□ -1.09
SNIP1-204ENST00000638725 PHLDA3Q9Y5J5 127 aa8.27□□□□□ -1.09
SNIP1-204ENST00000638725 TRAV21A0A0B4J279 112 aa8.27□□□□□ -1.09
SNIP1-204ENST00000638725 ZNF815PA8K554 130 aa8.27□□□□□ -1.09
SNIP1-204ENST00000638725 HOXA3O43365 443 aaPredicted RBP8.27□□□□□ -1.09
SNIP1-204ENST00000638725 TRBV12-3P01733 135 aa8.27□□□□□ -1.09
SNIP1-204ENST00000638725 DEFB104AQ8WTQ1 72 aa8.27□□□□□ -1.09
SNIP1-204ENST00000638725 PLEKHB2Q96CS7 222 aa8.27□□□□□ -1.09
SNIP1-204ENST00000638725 LENEPQ9Y5L5 61 aa8.27□□□□□ -1.09
SNIP1-204ENST00000638725 F6UB75 175 aa8.26□□□□□ -1.09
SNIP1-204ENST00000638725 LINC00477Q96M19 166 aa8.26□□□□□ -1.09
SNIP1-204ENST00000638725 GNRH2O43555 120 aa8.26□□□□□ -1.09
SNIP1-204ENST00000638725 ARL3P36405 182 aa8.26□□□□□ -1.09
SNIP1-204ENST00000638725 OR10J6PQ8NGY7 276 aa8.26□□□□□ -1.09
SNIP1-204ENST00000638725 SPATA25Q9BR10 227 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms