RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 COA6Q5JTJ3 125 aaKnown RBP16.13■□□□□ 0.17
SCARB2-212ENST00000638663 AGRNO00468 2067 aa16.13■□□□□ 0.17
SCARB2-212ENST00000638663 LEPP41159 167 aa16.13■□□□□ 0.17
SCARB2-212ENST00000638663 HIST3H2BBQ8N257 126 aa16.13■□□□□ 0.17
SCARB2-212ENST00000638663 ODF3Q96PU9 254 aa16.13■□□□□ 0.17
SCARB2-212ENST00000638663 A0A1B0GW15 77 aa16.12■□□□□ 0.17
SCARB2-212ENST00000638663 SRIP30626 198 aa16.12■□□□□ 0.17
SCARB2-212ENST00000638663 ZNF124Q15973 351 aa16.12■□□□□ 0.17
SCARB2-212ENST00000638663 MAP6D1Q9H9H5 199 aa16.12■□□□□ 0.17
SCARB2-212ENST00000638663 ZNF256Q9Y2P7 627 aaPredicted RBP16.12■□□□□ 0.17
SCARB2-212ENST00000638663 IFITM10A6NMD0 228 aa16.11■□□□□ 0.17
SCARB2-212ENST00000638663 S100A8P05109 93 aa16.11■□□□□ 0.17
SCARB2-212ENST00000638663 M0R2Z0 102 aa16.11■□□□□ 0.17
SCARB2-212ENST00000638663 JMJD1CQ15652 2540 aa16.1■□□□□ 0.17
SCARB2-212ENST00000638663 PF4P02776 101 aa16.1■□□□□ 0.17
SCARB2-212ENST00000638663 ANXA2RQ3ZCQ2 193 aa16.1■□□□□ 0.17
SCARB2-212ENST00000638663 TRAV12-2A0A075B6T6 113 aa16.09■□□□□ 0.17
SCARB2-212ENST00000638663 NTF3P20783 257 aa16.09■□□□□ 0.17
SCARB2-212ENST00000638663 TWIST1Q15672 202 aa16.09■□□□□ 0.17
SCARB2-212ENST00000638663 SPINK13Q1W4C9 94 aa16.09■□□□□ 0.17
SCARB2-212ENST00000638663 TRAV12-3A0A0B4J271 114 aa16.09■□□□□ 0.17
SCARB2-212ENST00000638663 C7orf71A4D174 169 aa16.09■□□□□ 0.17
SCARB2-212ENST00000638663 F2Z2F3 143 aa16.09■□□□□ 0.17
SCARB2-212ENST00000638663 HLA-DRB4P13762 266 aa16.09■□□□□ 0.17
SCARB2-212ENST00000638663 AMTNQ6UX39 209 aa16.09■□□□□ 0.17
SCARB2-212ENST00000638663 TMEM256Q8N2U0 113 aa16.09■□□□□ 0.17
SCARB2-212ENST00000638663 TP53TG3Q9ULZ0 132 aa16.09■□□□□ 0.17
SCARB2-212ENST00000638663 HLA-DRB4X5D2U9 266 aa16.09■□□□□ 0.17
SCARB2-212ENST00000638663 H3BMM0 161 aa16.08■□□□□ 0.16
SCARB2-212ENST00000638663 CDKN1BP46527 198 aa16.08■□□□□ 0.16
SCARB2-212ENST00000638663 GATD1Q8NB37 220 aa16.08■□□□□ 0.16
SCARB2-212ENST00000638663 NIPBLQ6KC79 2804 aaeCLIP16.08■□□□□ 0.16
SCARB2-212ENST00000638663 S100A2P29034 98 aa16.07■□□□□ 0.16
SCARB2-212ENST00000638663 TSPOP30536 169 aa16.07■□□□□ 0.16
SCARB2-212ENST00000638663 BAGE3Q86Y29 109 aa16.07■□□□□ 0.16
SCARB2-212ENST00000638663 CNFNQ9BYD5 112 aa16.07■□□□□ 0.16
SCARB2-212ENST00000638663 MSRB1Q9NZV6 116 aa16.07■□□□□ 0.16
SCARB2-212ENST00000638663 LOC102724200A0A096LPH7 203 aaPredicted RBP16.07■□□□□ 0.16
SCARB2-212ENST00000638663 H3BVH4 76 aa16.07■□□□□ 0.16
SCARB2-212ENST00000638663 Q0VG73 95 aa16.07■□□□□ 0.16
SCARB2-212ENST00000638663 ALKBH7Q9BT30 221 aaPredicted RBP16.07■□□□□ 0.16
SCARB2-212ENST00000638663 FXYD7P58549 80 aa16.06■□□□□ 0.16
SCARB2-212ENST00000638663 ODF3L2Q3SX64 289 aa16.06■□□□□ 0.16
SCARB2-212ENST00000638663 ZNF493Q6ZR52 646 aa16.06■□□□□ 0.16
SCARB2-212ENST00000638663 TIMM8BQ9Y5J9 83 aaPredicted RBP16.06■□□□□ 0.16
SCARB2-212ENST00000638663 GNRH2O43555 120 aa16.06■□□□□ 0.16
SCARB2-212ENST00000638663 NUPR1O60356 82 aa16.06■□□□□ 0.16
SCARB2-212ENST00000638663 ZNF324O75467 553 aaPredicted RBP16.06■□□□□ 0.16
SCARB2-212ENST00000638663 IGLV1-51P01701 117 aa16.06■□□□□ 0.16
SCARB2-212ENST00000638663 LINC00482Q8N8I6 264 aa16.06■□□□□ 0.16
SCARB2-212ENST00000638663 OR10AG1Q8NH19 301 aa16.06■□□□□ 0.16
SCARB2-212ENST00000638663 FABP4P15090 132 aa16.05■□□□□ 0.16
SCARB2-212ENST00000638663 ASIPP42127 132 aa16.05■□□□□ 0.16
SCARB2-212ENST00000638663 OR10J3Q5JRS4 329 aa16.05■□□□□ 0.16
SCARB2-212ENST00000638663 RBMY1BA6NDE4 496 aaKnown RBP16.04■□□□□ 0.16
SCARB2-212ENST00000638663 RBMY1EA6NEQ0 496 aaKnown RBP16.04■□□□□ 0.16
SCARB2-212ENST00000638663 SNAI2O43623 268 aa16.04■□□□□ 0.16
SCARB2-212ENST00000638663 SERF1AO75920 110 aa16.04■□□□□ 0.16
SCARB2-212ENST00000638663 OR5AL1P0C617 328 aa16.04■□□□□ 0.16
SCARB2-212ENST00000638663 RBMY1DP0C7P1 496 aaKnown RBP16.04■□□□□ 0.16
SCARB2-212ENST00000638663 S100A4P26447 101 aaKnown RBP16.04■□□□□ 0.16
SCARB2-212ENST00000638663 LINC00310P59036 64 aa16.04■□□□□ 0.16
SCARB2-212ENST00000638663 IQCJQ1A5X6 159 aa16.04■□□□□ 0.16
SCARB2-212ENST00000638663 FAM159AQ6UWV7 190 aa16.04■□□□□ 0.16
SCARB2-212ENST00000638663 C18orf32Q8TCD1 76 aa16.04■□□□□ 0.16
SCARB2-212ENST00000638663 A8MTW9 85 aa16.04■□□□□ 0.16
SCARB2-212ENST00000638663 HIST1H2BLQ99880 126 aa16.04■□□□□ 0.16
SCARB2-212ENST00000638663 AMN1Q8IY45 258 aa16.03■□□□□ 0.16
SCARB2-212ENST00000638663 SPRY2O43597 315 aa16.02■□□□□ 0.16
SCARB2-212ENST00000638663 CITED1Q99966 193 aa16.02■□□□□ 0.16
SCARB2-212ENST00000638663 OR11H12B2RN74 326 aa16.02■□□□□ 0.15
SCARB2-212ENST00000638663 AMBPP02760 352 aa16.02■□□□□ 0.15
SCARB2-212ENST00000638663 SPANXN1Q5VSR9 72 aa16.02■□□□□ 0.15
SCARB2-212ENST00000638663 FAM104BQ5XKR9 115 aa16.02■□□□□ 0.15
SCARB2-212ENST00000638663 RCHY1Q96PM5 261 aa16.02■□□□□ 0.15
SCARB2-212ENST00000638663 KCNS1Q96KK3 526 aa16.01■□□□□ 0.15
SCARB2-212ENST00000638663 TEP1Q99973 2627 aaKnown RBP16■□□□□ 0.15
SCARB2-212ENST00000638663 OR10D4PQ8NGN7 298 aa16■□□□□ 0.15
SCARB2-212ENST00000638663 TMEM191AQ9H0A3 160 aa16■□□□□ 0.15
SCARB2-212ENST00000638663 TENM1Q9UKZ4 2725 aa16■□□□□ 0.15
SCARB2-212ENST00000638663 CD7P09564 240 aa16■□□□□ 0.15
SCARB2-212ENST00000638663 RNASE3P12724 160 aaKnown RBP16■□□□□ 0.15
SCARB2-212ENST00000638663 CACNG7P62955 275 aa16■□□□□ 0.15
SCARB2-212ENST00000638663 OR2K2Q8NGT1 345 aa16■□□□□ 0.15
SCARB2-212ENST00000638663 CRXO43186 299 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-212ENST00000638663 ATRQ13535 2644 aa15.99■□□□□ 0.15
SCARB2-212ENST00000638663 PACRGQ96M98 296 aaPredicted RBP15.99■□□□□ 0.15
SCARB2-212ENST00000638663 IGHV4-4A0A075B6R2 117 aa15.98■□□□□ 0.15
SCARB2-212ENST00000638663 TDRG1Q3Y452 100 aa15.98■□□□□ 0.15
SCARB2-212ENST00000638663 DNLZQ5SXM8 178 aa15.98■□□□□ 0.15
SCARB2-212ENST00000638663 PHLDA3Q9Y5J5 127 aa15.98■□□□□ 0.15
SCARB2-212ENST00000638663 M0R381 172 aa15.98■□□□□ 0.15
SCARB2-212ENST00000638663 RBMY1A1P0DJD3 496 aaKnown RBP15.98■□□□□ 0.15
SCARB2-212ENST00000638663 RBMY1CP0DJD4 496 aa15.98■□□□□ 0.15
SCARB2-212ENST00000638663 MED14OSP0DP75 135 aa15.98■□□□□ 0.15
SCARB2-212ENST00000638663 ESDP10768 282 aa15.98■□□□□ 0.15
SCARB2-212ENST00000638663 RBMY1FQ15415 496 aaKnown RBP15.98■□□□□ 0.15
SCARB2-212ENST00000638663 MRPL51Q4U2R6 128 aaKnown RBP15.98■□□□□ 0.15
SCARB2-212ENST00000638663 STHQ8IWL8 128 aa15.98■□□□□ 0.15
SCARB2-212ENST00000638663 SPATA3Q8NHX4 192 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms