RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 IGHV2-70DA0A0C4DH43 119 aa13.47□□□□□ -0.25
CACNA1A-253ENST00000637927 A0A1B0GW64 132 aa13.46□□□□□ -0.25
CACNA1A-253ENST00000637927 NDUFS6O75380 124 aaKnown RBP13.46□□□□□ -0.25
CACNA1A-253ENST00000637927 NMSQ5H8A3 153 aa13.46□□□□□ -0.25
CACNA1A-253ENST00000637927 LECT2O14960 151 aa13.46□□□□□ -0.25
CACNA1A-253ENST00000637927 IGF2-ASQ6U949 168 aa13.46□□□□□ -0.26
CACNA1A-253ENST00000637927 TMEM141Q96I45 108 aa13.45□□□□□ -0.26
CACNA1A-253ENST00000637927 PLCE1Q9P212 2302 aa13.45□□□□□ -0.26
CACNA1A-253ENST00000637927 VSIG2Q96IQ7 327 aa13.45□□□□□ -0.26
CACNA1A-253ENST00000637927 ICOSQ9Y6W8 199 aa13.45□□□□□ -0.26
CACNA1A-253ENST00000637927 FAM231DQ6ZW35 169 aa13.45□□□□□ -0.26
CACNA1A-253ENST00000637927 RETNLBQ9BQ08 111 aa13.45□□□□□ -0.26
CACNA1A-253ENST00000637927 GATA3P23771 443 aa13.44□□□□□ -0.26
CACNA1A-253ENST00000637927 SPINK6Q6UWN8 80 aa13.44□□□□□ -0.26
CACNA1A-253ENST00000637927 FUSP35637 526 aaKnown RBP eCLIP13.44□□□□□ -0.26
CACNA1A-253ENST00000637927 SHANK2-AS3Q9BTD1 123 aa13.44□□□□□ -0.26
CACNA1A-253ENST00000637927 A0A1B0GX51 115 aa13.44□□□□□ -0.26
CACNA1A-253ENST00000637927 ZNF503-AS2A6NEH8 195 aa13.44□□□□□ -0.26
CACNA1A-253ENST00000637927 ZNF134P52741 427 aa13.44□□□□□ -0.26
CACNA1A-253ENST00000637927 DYNAPQ8N1N2 210 aa13.44□□□□□ -0.26
CACNA1A-253ENST00000637927 PFN1P07737 140 aaKnown RBP13.43□□□□□ -0.26
CACNA1A-253ENST00000637927 FGF16O43320 207 aa13.43□□□□□ -0.26
CACNA1A-253ENST00000637927 BRK1Q8WUW1 75 aa13.43□□□□□ -0.26
CACNA1A-253ENST00000637927 OOSP1A8MZH6 123 aa13.43□□□□□ -0.26
CACNA1A-253ENST00000637927 IGHV4-38-2P0DP08 117 aa13.43□□□□□ -0.26
CACNA1A-253ENST00000637927 SIRPDQ9H106 197 aa13.43□□□□□ -0.26
CACNA1A-253ENST00000637927 CACNA1EQ15878 2313 aa13.43□□□□□ -0.26
CACNA1A-253ENST00000637927 GATA1P15976 413 aaPredicted RBP13.43□□□□□ -0.26
CACNA1A-253ENST00000637927 SCXQ7RTU7 201 aa13.43□□□□□ -0.26
CACNA1A-253ENST00000637927 DKK2Q9UBU2 259 aa13.43□□□□□ -0.26
CACNA1A-253ENST00000637927 PRR4Q16378 134 aa13.43□□□□□ -0.26
CACNA1A-253ENST00000637927 UTF1Q5T230 341 aa13.43□□□□□ -0.26
CACNA1A-253ENST00000637927 TMEM14EPQ6UXP3 125 aa13.42□□□□□ -0.26
CACNA1A-253ENST00000637927 RPL39LQ96EH5 51 aaKnown RBP13.42□□□□□ -0.26
CACNA1A-253ENST00000637927 LHFPL1Q86WI0 220 aa13.42□□□□□ -0.26
CACNA1A-253ENST00000637927 CRIPAKQ8N1N5 446 aa13.42□□□□□ -0.26
CACNA1A-253ENST00000637927 MRPL35Q9NZE8 188 aaKnown RBP13.42□□□□□ -0.26
CACNA1A-253ENST00000637927 KLK12Q9UKR0 248 aa13.42□□□□□ -0.26
CACNA1A-253ENST00000637927 X6R8D5 127 aa13.42□□□□□ -0.26
CACNA1A-253ENST00000637927 DEFB1P60022 68 aa13.41□□□□□ -0.26
CACNA1A-253ENST00000637927 C9orf66Q5T8R8 295 aa13.41□□□□□ -0.26
CACNA1A-253ENST00000637927 WFDC10BQ8IUB3 73 aa13.41□□□□□ -0.26
CACNA1A-253ENST00000637927 CEND1Q8N111 149 aa13.41□□□□□ -0.26
CACNA1A-253ENST00000637927 DENND4AQ7Z401 1863 aa13.41□□□□□ -0.26
CACNA1A-253ENST00000637927 RNF5Q99942 180 aa13.41□□□□□ -0.26
CACNA1A-253ENST00000637927 TMEM14BQ9NUH8 114 aa13.41□□□□□ -0.26
CACNA1A-253ENST00000637927 PCNX2A6NKB5 2137 aa13.41□□□□□ -0.26
CACNA1A-253ENST00000637927 ZC2HC1AQ96GY0 325 aa13.41□□□□□ -0.26
CACNA1A-253ENST00000637927 HIGD2AQ9BW72 106 aa13.41□□□□□ -0.26
CACNA1A-253ENST00000637927 UBE2D4Q9Y2X8 147 aa13.41□□□□□ -0.26
CACNA1A-253ENST00000637927 SLAQ13239 276 aa13.4□□□□□ -0.26
CACNA1A-253ENST00000637927 NREPQ16612 68 aa13.4□□□□□ -0.26
CACNA1A-253ENST00000637927 CACNA1BQ00975 2339 aa13.4□□□□□ -0.26
CACNA1A-253ENST00000637927 C17orf58Q2M2W7 97 aa13.4□□□□□ -0.26
CACNA1A-253ENST00000637927 ETDBQ3ZM63 59 aa13.4□□□□□ -0.26
CACNA1A-253ENST00000637927 KLK5Q9Y337 293 aaPredicted RBP13.4□□□□□ -0.26
CACNA1A-253ENST00000637927 ZGRF1Q86YA3 2104 aa13.4□□□□□ -0.26
CACNA1A-253ENST00000637927 PRR20EP86478 221 aa13.4□□□□□ -0.26
CACNA1A-253ENST00000637927 PRR20CP86479 221 aa13.4□□□□□ -0.26
CACNA1A-253ENST00000637927 PRR20DP86480 221 aa13.4□□□□□ -0.26
CACNA1A-253ENST00000637927 PRR20BP86481 221 aa13.4□□□□□ -0.26
CACNA1A-253ENST00000637927 PRR20AP86496 221 aa13.4□□□□□ -0.26
CACNA1A-253ENST00000637927 OR11H6Q8NGC7 330 aa13.4□□□□□ -0.26
CACNA1A-253ENST00000637927 FRMPD3Q5JV73 1810 aa13.4□□□□□ -0.26
CACNA1A-253ENST00000637927 RBAKDNA6NC62 111 aa13.39□□□□□ -0.27
CACNA1A-253ENST00000637927 HERVK_113P63121 156 aa13.39□□□□□ -0.27
CACNA1A-253ENST00000637927 MRPL53Q96EL3 112 aaKnown RBP13.39□□□□□ -0.27
CACNA1A-253ENST00000637927 FBLN5Q9UBX5 448 aa13.39□□□□□ -0.27
CACNA1A-253ENST00000637927 K7EM74 188 aa13.39□□□□□ -0.27
CACNA1A-253ENST00000637927 NTN5Q8WTR8 489 aaPredicted RBP13.39□□□□□ -0.27
CACNA1A-253ENST00000637927 Q6ZR03 302 aa13.39□□□□□ -0.27
CACNA1A-253ENST00000637927 NCKAP5O14513 1909 aa13.39□□□□□ -0.27
CACNA1A-253ENST00000637927 A0A087WZ39 114 aa13.39□□□□□ -0.27
CACNA1A-253ENST00000637927 RHOHQ15669 191 aa13.39□□□□□ -0.27
CACNA1A-253ENST00000637927 ABCA1O95477 2261 aa13.39□□□□□ -0.27
CACNA1A-253ENST00000637927 IGKV1-17P01599 117 aa13.39□□□□□ -0.27
CACNA1A-253ENST00000637927 MRPL36Q9P0J6 103 aaKnown RBP13.39□□□□□ -0.27
CACNA1A-253ENST00000637927 KIAA1671Q9BY89 1806 aa13.39□□□□□ -0.27
CACNA1A-253ENST00000637927 NPSP0C0P6 89 aa13.39□□□□□ -0.27
CACNA1A-253ENST00000637927 MPZP25189 248 aa13.39□□□□□ -0.27
CACNA1A-253ENST00000637927 PRR25Q96S07 402 aa13.39□□□□□ -0.27
CACNA1A-253ENST00000637927 COX7A2LO14548 114 aa13.38□□□□□ -0.27
CACNA1A-253ENST00000637927 IGKV2D-26A0A0A0MRZ7 120 aa13.38□□□□□ -0.27
CACNA1A-253ENST00000637927 QRFPP83859 136 aa13.38□□□□□ -0.27
CACNA1A-253ENST00000637927 PLXNA3P51805 1871 aa13.38□□□□□ -0.27
CACNA1A-253ENST00000637927 COLCA2A8K830 154 aa13.38□□□□□ -0.27
CACNA1A-253ENST00000637927 IGHV4-61A0A0C4DH41 118 aa13.37□□□□□ -0.27
CACNA1A-253ENST00000637927 A0A0U1RQV1 116 aa13.37□□□□□ -0.27
CACNA1A-253ENST00000637927 Q6ZVH6 145 aa13.37□□□□□ -0.27
CACNA1A-253ENST00000637927 PPDPFQ9H3Y8 114 aa13.37□□□□□ -0.27
CACNA1A-253ENST00000637927 MP68P56378 58 aa13.37□□□□□ -0.27
CACNA1A-253ENST00000637927 NPYP01303 97 aa13.37□□□□□ -0.27
CACNA1A-253ENST00000637927 SPRNQ5BIV9 151 aa13.37□□□□□ -0.27
CACNA1A-253ENST00000637927 LY6G6CO95867 125 aa13.37□□□□□ -0.27
CACNA1A-253ENST00000637927 C17orf82Q86X59 251 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-253ENST00000637927 MUSTN1Q8IVN3 82 aa13.36□□□□□ -0.27
CACNA1A-253ENST00000637927 Q8N8P6 123 aa13.36□□□□□ -0.27
CACNA1A-253ENST00000637927 PCP2Q8IVA1 136 aa13.36□□□□□ -0.27
CACNA1A-253ENST00000637927 SPART-AS1P0CW21 52 aa13.36□□□□□ -0.27
CACNA1A-253ENST00000637927 UBE2V1Q13404 147 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms