RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	TMEM61	Q8N0U2	210 aa		11.85	□□□□□ -0.51
CACNA1A-231	ENST00000636816	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.85	□□□□□ -0.51
CACNA1A-231	ENST00000636816	FN1	P02751	2386 aa	Known RBP	11.85	□□□□□ -0.51
CACNA1A-231	ENST00000636816		A0A0J9YX75	114 aa		11.84	□□□□□ -0.51
CACNA1A-231	ENST00000636816	NDUFA7	O95182	113 aa		11.84	□□□□□ -0.51
CACNA1A-231	ENST00000636816	FHL3	Q13643	280 aa		11.84	□□□□□ -0.51
CACNA1A-231	ENST00000636816	CDPF1	Q6NVV7	123 aa		11.84	□□□□□ -0.51
CACNA1A-231	ENST00000636816	GATD1	Q8NB37	220 aa		11.84	□□□□□ -0.51
CACNA1A-231	ENST00000636816	NAGK	Q9UJ70	344 aa		11.84	□□□□□ -0.51
CACNA1A-231	ENST00000636816	PROK1	P58294	105 aa		11.83	□□□□□ -0.52
CACNA1A-231	ENST00000636816	TWIST1	Q15672	202 aa		11.83	□□□□□ -0.52
CACNA1A-231	ENST00000636816	NSD1	Q96L73	2696 aa	Predicted RBP	11.83	□□□□□ -0.52
CACNA1A-231	ENST00000636816	PAFAH1B2	P68402	229 aa		11.83	□□□□□ -0.52
CACNA1A-231	ENST00000636816	DEFB114	Q30KQ6	69 aa		11.83	□□□□□ -0.52
CACNA1A-231	ENST00000636816	APRG1	Q8IVJ8	170 aa		11.83	□□□□□ -0.52
CACNA1A-231	ENST00000636816	TMEM18	Q96B42	140 aa		11.83	□□□□□ -0.52
CACNA1A-231	ENST00000636816	JMJD8	Q96S16	334 aa		11.83	□□□□□ -0.52
CACNA1A-231	ENST00000636816	TRAV21	A0A0B4J279	112 aa		11.82	□□□□□ -0.52
CACNA1A-231	ENST00000636816		A0A1B0GW15	77 aa		11.82	□□□□□ -0.52
CACNA1A-231	ENST00000636816	LINC00587	B1AMM8	73 aa		11.82	□□□□□ -0.52
CACNA1A-231	ENST00000636816	ESD	P10768	282 aa		11.82	□□□□□ -0.52
CACNA1A-231	ENST00000636816	KRTAP10-3	P60369	221 aa		11.82	□□□□□ -0.52
CACNA1A-231	ENST00000636816	ZNF493	Q6ZR52	646 aa		11.82	□□□□□ -0.52
CACNA1A-231	ENST00000636816	ADARB2-AS1	A8MUL3	147 aa		11.81	□□□□□ -0.52
CACNA1A-231	ENST00000636816	SPRY2	O43597	315 aa		11.81	□□□□□ -0.52
CACNA1A-231	ENST00000636816	ZNF124	Q15973	351 aa		11.81	□□□□□ -0.52
CACNA1A-231	ENST00000636816	CD300E	Q496F6	205 aa	Predicted RBP	11.81	□□□□□ -0.52
CACNA1A-231	ENST00000636816	AMN1	Q8IY45	258 aa		11.81	□□□□□ -0.52
CACNA1A-231	ENST00000636816	DYNLRB2	Q8TF09	96 aa		11.81	□□□□□ -0.52
CACNA1A-231	ENST00000636816	KLLN	B2CW77	178 aa		11.81	□□□□□ -0.52
CACNA1A-231	ENST00000636816	JOSD1	Q15040	202 aa	Predicted RBP	11.81	□□□□□ -0.52
CACNA1A-231	ENST00000636816	ANXA2R	Q3ZCQ2	193 aa		11.81	□□□□□ -0.52
CACNA1A-231	ENST00000636816	EBLN2	Q6P2I7	272 aa		11.81	□□□□□ -0.52
CACNA1A-231	ENST00000636816	OR10AG1	Q8NH19	301 aa		11.81	□□□□□ -0.52
CACNA1A-231	ENST00000636816	TRBV7-9	A0A0J9YWB2	115 aa		11.8	□□□□□ -0.52
CACNA1A-231	ENST00000636816	KNCN	A6PVL3	124 aa		11.8	□□□□□ -0.52
CACNA1A-231	ENST00000636816	DEFB131A	P59861	70 aa		11.8	□□□□□ -0.52
CACNA1A-231	ENST00000636816	URB1-AS1	Q96HZ7	61 aa		11.8	□□□□□ -0.52
CACNA1A-231	ENST00000636816	CNFN	Q9BYD5	112 aa		11.8	□□□□□ -0.52
CACNA1A-231	ENST00000636816	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	11.8	□□□□□ -0.52
CACNA1A-231	ENST00000636816	TRAV12-2	A0A075B6T6	113 aa		11.79	□□□□□ -0.52
CACNA1A-231	ENST00000636816		M0R2Z0	102 aa		11.79	□□□□□ -0.52
CACNA1A-231	ENST00000636816	GNRH2	O43555	120 aa		11.79	□□□□□ -0.52
CACNA1A-231	ENST00000636816	TCF21	O43680	179 aa		11.79	□□□□□ -0.52
CACNA1A-231	ENST00000636816	NSUN5P1	Q3KNT7	163 aa		11.79	□□□□□ -0.52
CACNA1A-231	ENST00000636816	FAM104B	Q5XKR9	115 aa		11.79	□□□□□ -0.52
CACNA1A-231	ENST00000636816	FLNB	O75369	2602 aa	Known RBP	11.79	□□□□□ -0.52
CACNA1A-231	ENST00000636816	TRAV12-3	A0A0B4J271	114 aa		11.79	□□□□□ -0.52
CACNA1A-231	ENST00000636816		H3BVH4	76 aa		11.79	□□□□□ -0.52
CACNA1A-231	ENST00000636816	FAM19A2	Q8N3H0	131 aa		11.79	□□□□□ -0.52
CACNA1A-231	ENST00000636816	NIT1	Q86X76	327 aa		11.78	□□□□□ -0.52
CACNA1A-231	ENST00000636816	KCNS1	Q96KK3	526 aa		11.78	□□□□□ -0.52
CACNA1A-231	ENST00000636816	PMCH	P20382	165 aa		11.78	□□□□□ -0.52
CACNA1A-231	ENST00000636816	SPINK13	Q1W4C9	94 aa		11.78	□□□□□ -0.52
CACNA1A-231	ENST00000636816	MRPL51	Q4U2R6	128 aa	Known RBP	11.78	□□□□□ -0.52
CACNA1A-231	ENST00000636816	FOXI2	Q6ZQN5	318 aa		11.78	□□□□□ -0.52
CACNA1A-231	ENST00000636816	SAMD10	Q9BYL1	202 aa		11.78	□□□□□ -0.52
CACNA1A-231	ENST00000636816	PRSS47	A8MTI9	375 aa		11.77	□□□□□ -0.53
CACNA1A-231	ENST00000636816	FXYD7	P58549	80 aa		11.77	□□□□□ -0.53
CACNA1A-231	ENST00000636816	RNASEK	Q6P5S7	137 aa	Known RBP	11.77	□□□□□ -0.53
CACNA1A-231	ENST00000636816	AMTN	Q6UX39	209 aa		11.77	□□□□□ -0.53
CACNA1A-231	ENST00000636816		Q6ZWC4	215 aa		11.77	□□□□□ -0.53
CACNA1A-231	ENST00000636816	C2CD3	Q4AC94	2353 aa		11.77	□□□□□ -0.53
CACNA1A-231	ENST00000636816		D6R8Y8	96 aa		11.76	□□□□□ -0.53
CACNA1A-231	ENST00000636816	SMKR1	H3BMG3	65 aa		11.76	□□□□□ -0.53
CACNA1A-231	ENST00000636816	SNAI2	O43623	268 aa		11.76	□□□□□ -0.53
CACNA1A-231	ENST00000636816	ZNF324	O75467	553 aa	Predicted RBP	11.76	□□□□□ -0.53
CACNA1A-231	ENST00000636816	OR5AL1	P0C617	328 aa		11.76	□□□□□ -0.53
CACNA1A-231	ENST00000636816	RNF185	Q96GF1	192 aa		11.76	□□□□□ -0.53
CACNA1A-231	ENST00000636816	TMEM191A	Q9H0A3	160 aa		11.76	□□□□□ -0.53
CACNA1A-231	ENST00000636816	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.76	□□□□□ -0.53
CACNA1A-231	ENST00000636816	C7orf71	A4D174	169 aa		11.76	□□□□□ -0.53
CACNA1A-231	ENST00000636816	CRLF1	O75462	422 aa		11.76	□□□□□ -0.53
CACNA1A-231	ENST00000636816	GAS8-AS1	O95177	125 aa		11.76	□□□□□ -0.53
CACNA1A-231	ENST00000636816	LEP	P41159	167 aa		11.76	□□□□□ -0.53
CACNA1A-231	ENST00000636816	ODF3	Q96PU9	254 aa		11.76	□□□□□ -0.53
CACNA1A-231	ENST00000636816	MAP6D1	Q9H9H5	199 aa		11.76	□□□□□ -0.53
CACNA1A-231	ENST00000636816	TRAV2	A0A0B4J234	112 aa		11.75	□□□□□ -0.53
CACNA1A-231	ENST00000636816	DUSP14	O95147	198 aa	Known RBP	11.75	□□□□□ -0.53
CACNA1A-231	ENST00000636816	RAB4A	P20338	218 aa		11.75	□□□□□ -0.53
CACNA1A-231	ENST00000636816	EVI2A	P22794	236 aa		11.75	□□□□□ -0.53
CACNA1A-231	ENST00000636816	AMT	P48728	403 aa		11.75	□□□□□ -0.53
CACNA1A-231	ENST00000636816		U3KQK5	164 aa		11.75	□□□□□ -0.53
CACNA1A-231	ENST00000636816	NIPBL	Q6KC79	2804 aa	eCLIP	11.74	□□□□□ -0.53
CACNA1A-231	ENST00000636816	RNASE3	P12724	160 aa	Known RBP	11.74	□□□□□ -0.53
CACNA1A-231	ENST00000636816	ASIP	P42127	132 aa		11.74	□□□□□ -0.53
CACNA1A-231	ENST00000636816	SPANXN1	Q5VSR9	72 aa		11.74	□□□□□ -0.53
CACNA1A-231	ENST00000636816	MUC4	Q99102	2169 aa		11.74	□□□□□ -0.53
CACNA1A-231	ENST00000636816	RBMY1B	A6NDE4	496 aa	Known RBP	11.74	□□□□□ -0.53
CACNA1A-231	ENST00000636816	RBMY1E	A6NEQ0	496 aa	Known RBP	11.74	□□□□□ -0.53
CACNA1A-231	ENST00000636816		H3BMM0	161 aa		11.74	□□□□□ -0.53
CACNA1A-231	ENST00000636816	NCR2	O95944	276 aa		11.74	□□□□□ -0.53
CACNA1A-231	ENST00000636816	RBMY1D	P0C7P1	496 aa	Known RBP	11.74	□□□□□ -0.53
CACNA1A-231	ENST00000636816	S100A4	P26447	101 aa	Known RBP	11.74	□□□□□ -0.53
CACNA1A-231	ENST00000636816	CDKN1B	P46527	198 aa		11.74	□□□□□ -0.53
CACNA1A-231	ENST00000636816	PMCHL1	Q16048	86 aa		11.74	□□□□□ -0.53
CACNA1A-231	ENST00000636816	DMRTA1	Q5VZB9	504 aa		11.73	□□□□□ -0.53
CACNA1A-231	ENST00000636816	FAM159A	Q6UWV7	190 aa		11.73	□□□□□ -0.53
CACNA1A-231	ENST00000636816	PRELID3A	Q96N28	172 aa		11.73	□□□□□ -0.53
CACNA1A-231	ENST00000636816	SPAG8	Q99932	426 aa	Predicted RBP	11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms