RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 B4DSR2 109 aa14.31□□□□□ -0.12
CLN5-216ENST00000636780 NPFFR1Q9GZQ6 430 aa14.31□□□□□ -0.12
CLN5-216ENST00000636780 HSPB8Q9UJY1 196 aa14.31□□□□□ -0.12
CLN5-216ENST00000636780 M0R381 172 aa14.31□□□□□ -0.12
CLN5-216ENST00000636780 LINC01559Q495D7 138 aa14.31□□□□□ -0.12
CLN5-216ENST00000636780 GNRH2O43555 120 aa14.3□□□□□ -0.12
CLN5-216ENST00000636780 RNASE4P34096 147 aaKnown RBP14.3□□□□□ -0.12
CLN5-216ENST00000636780 TMEM191AQ9H0A3 160 aa14.3□□□□□ -0.12
CLN5-216ENST00000636780 CHD6Q8TD26 2715 aa14.3□□□□□ -0.12
CLN5-216ENST00000636780 A0A1B0GW15 77 aa14.3□□□□□ -0.12
CLN5-216ENST00000636780 HIST2H2BCQ6DN03 193 aa14.3□□□□□ -0.12
CLN5-216ENST00000636780 DKK2Q9UBU2 259 aa14.3□□□□□ -0.12
CLN5-216ENST00000636780 ACANP16112 2415 aa14.3□□□□□ -0.12
CLN5-216ENST00000636780 NDUFS8O00217 210 aa14.29□□□□□ -0.12
CLN5-216ENST00000636780 TNFRSF6BO95407 300 aa14.29□□□□□ -0.12
CLN5-216ENST00000636780 M0QZK8 103 aa14.28□□□□□ -0.12
CLN5-216ENST00000636780 CDKN1BP46527 198 aa14.28□□□□□ -0.12
CLN5-216ENST00000636780 SPANXN1Q5VSR9 72 aa14.28□□□□□ -0.12
CLN5-216ENST00000636780 BEX4Q9NWD9 120 aaPredicted RBP14.28□□□□□ -0.12
CLN5-216ENST00000636780 RPS20P60866 119 aaKnown RBP14.28□□□□□ -0.12
CLN5-216ENST00000636780 LINC01545Q5VT33 79 aa14.28□□□□□ -0.12
CLN5-216ENST00000636780 C9orf47Q6ZRZ4 202 aa14.28□□□□□ -0.12
CLN5-216ENST00000636780 C20orf202A1L168 122 aa14.28□□□□□ -0.12
CLN5-216ENST00000636780 FBLL1A6NHQ2 334 aaKnown RBP14.28□□□□□ -0.12
CLN5-216ENST00000636780 NDUFA4O00483 81 aa14.28□□□□□ -0.12
CLN5-216ENST00000636780 LEPP41159 167 aa14.28□□□□□ -0.12
CLN5-216ENST00000636780 COL5A1-AS1Q5SY13 56 aa14.28□□□□□ -0.12
CLN5-216ENST00000636780 PET117Q6UWS5 81 aa14.28□□□□□ -0.12
CLN5-216ENST00000636780 ZFAND2AQ8N6M9 145 aa14.28□□□□□ -0.12
CLN5-216ENST00000636780 NUDT3O95989 172 aa14.27□□□□□ -0.12
CLN5-216ENST00000636780 TTTY13Q9BZ97 58 aa14.27□□□□□ -0.12
CLN5-216ENST00000636780 RBAKDNA6NC62 111 aa14.27□□□□□ -0.13
CLN5-216ENST00000636780 SOCS3O14543 225 aa14.27□□□□□ -0.13
CLN5-216ENST00000636780 S100A7P31151 101 aa14.27□□□□□ -0.13
CLN5-216ENST00000636780 WNK1Q9H4A3 2382 aa14.26□□□□□ -0.13
CLN5-216ENST00000636780 IGLV1-40P01703 118 aa14.26□□□□□ -0.13
CLN5-216ENST00000636780 CRIP2P52943 208 aaPredicted RBP14.26□□□□□ -0.13
CLN5-216ENST00000636780 ANXA2RQ3ZCQ2 193 aa14.26□□□□□ -0.13
CLN5-216ENST00000636780 SCRT2Q9NQ03 307 aa14.26□□□□□ -0.13
CLN5-216ENST00000636780 ITPR3Q14573 2671 aa14.25□□□□□ -0.13
CLN5-216ENST00000636780 HSBP1L1C9JCN9 74 aa14.25□□□□□ -0.13
CLN5-216ENST00000636780 C18orf65Q6ZTR6 163 aa14.25□□□□□ -0.13
CLN5-216ENST00000636780 TMEM190Q8WZ59 177 aa14.25□□□□□ -0.13
CLN5-216ENST00000636780 HBDP02042 147 aa14.24□□□□□ -0.13
CLN5-216ENST00000636780 C14orf178Q8N769 122 aaPredicted RBP14.24□□□□□ -0.13
CLN5-216ENST00000636780 RNF151Q2KHN1 245 aa14.24□□□□□ -0.13
CLN5-216ENST00000636780 SLC25A34Q6PIV7 304 aa14.24□□□□□ -0.13
CLN5-216ENST00000636780 OR10J6PQ8NGY7 276 aa14.24□□□□□ -0.13
CLN5-216ENST00000636780 IFI27L1Q96BM0 104 aa14.24□□□□□ -0.13
CLN5-216ENST00000636780 DUX3Q96PT4 197 aa14.24□□□□□ -0.13
CLN5-216ENST00000636780 JPT2Q9H910 190 aa14.24□□□□□ -0.13
CLN5-216ENST00000636780 CCL25O15444 150 aa14.23□□□□□ -0.13
CLN5-216ENST00000636780 ZNF688P0C7X2 276 aa14.23□□□□□ -0.13
CLN5-216ENST00000636780 DEFB136Q30KP8 78 aa14.23□□□□□ -0.13
CLN5-216ENST00000636780 C9orf139Q6ZV77 190 aa14.23□□□□□ -0.13
CLN5-216ENST00000636780 TMEM158Q8WZ71 300 aa14.23□□□□□ -0.13
CLN5-216ENST00000636780 CNFNQ9BYD5 112 aa14.23□□□□□ -0.13
CLN5-216ENST00000636780 MAP1LC3AQ9H492 121 aa14.23□□□□□ -0.13
CLN5-216ENST00000636780 NOTCH3Q9UM47 2321 aa14.23□□□□□ -0.13
CLN5-216ENST00000636780 TRAV12-2A0A075B6T6 113 aa14.23□□□□□ -0.13
CLN5-216ENST00000636780 A0A096LNT2 108 aa14.23□□□□□ -0.13
CLN5-216ENST00000636780 USMG5Q96IX5 58 aa14.23□□□□□ -0.13
CLN5-216ENST00000636780 PEF1Q9UBV8 284 aaKnown RBP14.23□□□□□ -0.13
CLN5-216ENST00000636780 CHTOPQ9Y3Y2 248 aaKnown RBP14.23□□□□□ -0.13
CLN5-216ENST00000636780 MTORP42345 2549 aa14.22□□□□□ -0.13
CLN5-216ENST00000636780 FLNAP21333 2647 aaKnown RBP14.22□□□□□ -0.13
CLN5-216ENST00000636780 S100A4P26447 101 aaKnown RBP14.22□□□□□ -0.13
CLN5-216ENST00000636780 CFHR3Q02985 330 aa14.22□□□□□ -0.13
CLN5-216ENST00000636780 ZNF843Q8N446 348 aa14.22□□□□□ -0.13
CLN5-216ENST00000636780 RPL39LQ96EH5 51 aaKnown RBP14.22□□□□□ -0.13
CLN5-216ENST00000636780 ST20Q9HBF5 79 aa14.22□□□□□ -0.13
CLN5-216ENST00000636780 MRPS16Q9Y3D3 137 aaKnown RBP14.22□□□□□ -0.13
CLN5-216ENST00000636780 TMEM238LA0A1B0GVL6 79 aa14.22□□□□□ -0.13
CLN5-216ENST00000636780 PTTG1IPP53801 180 aa14.22□□□□□ -0.13
CLN5-216ENST00000636780 NEGR1Q7Z3B1 354 aa14.22□□□□□ -0.13
CLN5-216ENST00000636780 LINC01356Q8N9X3 169 aa14.22□□□□□ -0.13
CLN5-216ENST00000636780 DAZ1Q9NQZ3 744 aaKnown RBP14.22□□□□□ -0.13
CLN5-216ENST00000636780 MUC4Q99102 2169 aa14.21□□□□□ -0.13
CLN5-216ENST00000636780 SYNJ2BPP57105 145 aa14.21□□□□□ -0.13
CLN5-216ENST00000636780 PCP2Q8IVA1 136 aa14.21□□□□□ -0.13
CLN5-216ENST00000636780 OR2K2Q8NGT1 345 aa14.21□□□□□ -0.13
CLN5-216ENST00000636780 COX6B1P14854 86 aa14.21□□□□□ -0.13
CLN5-216ENST00000636780 SMPXQ9UHP9 88 aa14.21□□□□□ -0.13
CLN5-216ENST00000636780 ITPR2Q14571 2701 aa14.21□□□□□ -0.14
CLN5-216ENST00000636780 PSMB8P28062 276 aa14.2□□□□□ -0.14
CLN5-216ENST00000636780 TRAV12-3A0A0B4J271 114 aa14.19□□□□□ -0.14
CLN5-216ENST00000636780 HOXA3O43365 443 aaPredicted RBP14.19□□□□□ -0.14
CLN5-216ENST00000636780 PRSS1P07477 247 aa14.19□□□□□ -0.14
CLN5-216ENST00000636780 NMUP48645 174 aa14.19□□□□□ -0.14
CLN5-216ENST00000636780 NRACQ8N912 160 aa14.19□□□□□ -0.14
CLN5-216ENST00000636780 CBY3A6NI87 242 aa14.19□□□□□ -0.14
CLN5-216ENST00000636780 PRM2P04554 102 aa14.19□□□□□ -0.14
CLN5-216ENST00000636780 MGPP08493 103 aa14.19□□□□□ -0.14
CLN5-216ENST00000636780 C2orf91Q6ZV80 131 aa14.18□□□□□ -0.14
CLN5-216ENST00000636780 PSMG4Q5JS54 123 aa14.18□□□□□ -0.14
CLN5-216ENST00000636780 A0A0G2JLM5 398 aa14.18□□□□□ -0.14
CLN5-216ENST00000636780 SRSF2Q01130 221 aaKnown RBP14.18□□□□□ -0.14
CLN5-216ENST00000636780 MRPL52Q86TS9 123 aaKnown RBP14.18□□□□□ -0.14
CLN5-216ENST00000636780 IGKV2D-26A0A0A0MRZ7 120 aa14.17□□□□□ -0.14
CLN5-216ENST00000636780 CD5LO43866 347 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms