RNA–Protein interactions for RNA: ENST00000636769.1

SCN2A-213, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,573 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-213ENST00000636769 C19orf71A6NCJ1 209 aa4.8□□□□□ -1.64
SCN2A-213ENST00000636769 RS1O15537 224 aa4.8□□□□□ -1.64
SCN2A-213ENST00000636769 IGHV3-53P01767 116 aa4.79□□□□□ -1.64
SCN2A-213ENST00000636769 NREPQ16612 68 aa4.79□□□□□ -1.64
SCN2A-213ENST00000636769 FAM167A-AS1Q96KT0 104 aa4.79□□□□□ -1.64
SCN2A-213ENST00000636769 BAALCQ8WXS3 180 aa4.79□□□□□ -1.64
SCN2A-213ENST00000636769 PRB4P10163 310 aaPredicted RBP4.79□□□□□ -1.64
SCN2A-213ENST00000636769 DOCK9Q9BZ29 2069 aa4.79□□□□□ -1.64
SCN2A-213ENST00000636769 NXPH4O95158 308 aa4.79□□□□□ -1.64
SCN2A-213ENST00000636769 KAAG1Q9UBP8 84 aa4.79□□□□□ -1.64
SCN2A-213ENST00000636769 LYRM9A8MSI8 78 aa4.79□□□□□ -1.64
SCN2A-213ENST00000636769 ATP6V0E1O15342 81 aa4.79□□□□□ -1.64
SCN2A-213ENST00000636769 DEFB131AP59861 70 aa4.79□□□□□ -1.64
SCN2A-213ENST00000636769 KLHL30-AS1Q8NEE0 82 aa4.79□□□□□ -1.64
SCN2A-213ENST00000636769 A0A0J9YXV3 536 aa4.79□□□□□ -1.64
SCN2A-213ENST00000636769 LINC01619G3V211 115 aa4.79□□□□□ -1.64
SCN2A-213ENST00000636769 WDR86Q86TI4 376 aa4.79□□□□□ -1.64
SCN2A-213ENST00000636769 SERP2Q8N6R1 65 aa4.79□□□□□ -1.64
SCN2A-213ENST00000636769 COX7A2LO14548 114 aa4.78□□□□□ -1.64
SCN2A-213ENST00000636769 SPINK13Q1W4C9 94 aa4.78□□□□□ -1.64
SCN2A-213ENST00000636769 DAD1P61803 113 aa4.78□□□□□ -1.64
SCN2A-213ENST00000636769 MRPS36P82909 103 aaKnown RBP4.78□□□□□ -1.64
SCN2A-213ENST00000636769 H3BUX3 64 aa4.78□□□□□ -1.64
SCN2A-213ENST00000636769 IGHV7-4-1A0A0J9YVY3 117 aa4.78□□□□□ -1.64
SCN2A-213ENST00000636769 IGLC6P0CF74 106 aa4.78□□□□□ -1.64
SCN2A-213ENST00000636769 C16orf54Q6UWD8 224 aa4.78□□□□□ -1.64
SCN2A-213ENST00000636769 B4DSR2 109 aa4.78□□□□□ -1.64
SCN2A-213ENST00000636769 LYNX1G3V0Z9 82 aa4.78□□□□□ -1.64
SCN2A-213ENST00000636769 LYNX1P0DP58 116 aa4.78□□□□□ -1.64
SCN2A-213ENST00000636769 LOXP28300 417 aaPredicted RBP4.78□□□□□ -1.64
SCN2A-213ENST00000636769 TTTY13Q9BZ97 58 aa4.78□□□□□ -1.64
SCN2A-213ENST00000636769 IGHV1-58A0A0C4DH39 117 aa4.78□□□□□ -1.64
SCN2A-213ENST00000636769 PRB3Q04118 309 aaPredicted RBP4.78□□□□□ -1.64
SCN2A-213ENST00000636769 TMEM61Q8N0U2 210 aa4.78□□□□□ -1.64
SCN2A-213ENST00000636769 A0A0J9YXY3 114 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 RTTNQ86VV8 2226 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 GATA1P15976 413 aaPredicted RBP4.77□□□□□ -1.65
SCN2A-213ENST00000636769 GATA3P23771 443 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 MIAQ16674 131 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 PATE2Q6UY27 113 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 Q6ZR03 302 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 KLK9Q9UKQ9 250 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 IGLV3-9A0A075B6K5 115 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 C3orf56Q8N813 242 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 TP73-AS1Q9UF72 201 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 TRBV30A0A0K0K1B3 111 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 F5H768 121 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 TRBV12-3P01733 135 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 COX7CP15954 63 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 LYPD2Q6UXB3 125 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 TP53BP1Q12888 1972 aaPredicted RBP4.77□□□□□ -1.65
SCN2A-213ENST00000636769 POLR2AP24928 1970 aaKnown RBP4.77□□□□□ -1.65
SCN2A-213ENST00000636769 C20orf197Q8N268 126 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 C10orf105Q8TEF2 133 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 U3KQE9 123 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 LECT2O14960 151 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 SAA4P35542 130 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 ZNF503Q96F45 646 aa4.77□□□□□ -1.65
SCN2A-213ENST00000636769 SCN5AQ14524 2016 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 PRR30Q53SZ7 412 aaPredicted RBP4.76□□□□□ -1.65
SCN2A-213ENST00000636769 TRAV4A0A0B4J268 109 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 HIST2H2BCQ6DN03 193 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 HIST2H2BDQ6DRA6 164 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 COX7B2Q8TF08 81 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 MBD6Q96DN6 1003 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 FAM110AQ9BQ89 295 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 TRPM7Q96QT4 1865 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 CEP290O15078 2479 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 NDUFB1O75438 58 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 IGLV1-44P01699 117 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 KRTAP27-1Q3LI81 207 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 RMI2Q96E14 147 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 BUB3O43684 328 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 DAZ2Q13117 558 aaKnown RBP4.76□□□□□ -1.65
SCN2A-213ENST00000636769 CFAP126Q5VTH2 177 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 DAZ4Q86SG3 579 aaKnown RBP4.76□□□□□ -1.65
SCN2A-213ENST00000636769 CLEC2BQ92478 149 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 UPK3BQ9BT76 320 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 DAZ3Q9NR90 486 aaKnown RBP4.76□□□□□ -1.65
SCN2A-213ENST00000636769 PKIGQ9Y2B9 76 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 Q0VFX4 171 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 C1orf195Q5TG92 126 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 ATG2BQ96BY7 2078 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 UBE2E2Q96LR5 201 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 CLUHP3Q96NS8 147 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 I3L2K1 104 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 C9orf47Q6ZRZ4 202 aa4.76□□□□□ -1.65
SCN2A-213ENST00000636769 CEP250Q9BV73 2442 aa4.75□□□□□ -1.65
SCN2A-213ENST00000636769 IGKV1-17P01599 117 aa4.75□□□□□ -1.65
SCN2A-213ENST00000636769 RPL39LQ96EH5 51 aaKnown RBP4.75□□□□□ -1.65
SCN2A-213ENST00000636769 C17orf77Q96MU5 243 aa4.75□□□□□ -1.65
SCN2A-213ENST00000636769 MDFICQ9P1T7 246 aa4.75□□□□□ -1.65
SCN2A-213ENST00000636769 CHKB-CPT1BH3BT56 60 aa4.75□□□□□ -1.65
SCN2A-213ENST00000636769 WNK2Q9Y3S1 2297 aa4.75□□□□□ -1.65
SCN2A-213ENST00000636769 TEX49A0A1B0GTD5 131 aa4.75□□□□□ -1.65
SCN2A-213ENST00000636769 FOXE3Q13461 319 aa4.75□□□□□ -1.65
SCN2A-213ENST00000636769 DOCK6Q96HP0 2047 aa4.75□□□□□ -1.65
SCN2A-213ENST00000636769 IGHV3-38A0A0C4DH36 116 aa4.75□□□□□ -1.65
SCN2A-213ENST00000636769 CENPVL3A0A0U1RRI6 287 aa4.75□□□□□ -1.65
SCN2A-213ENST00000636769 RPL18AQ02543 176 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms