RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 LINC01549A6NIU2 74 aa11.31□□□□□ -0.6
CACNA1A-220ENST00000635988 ATP5G2Q06055 141 aa11.31□□□□□ -0.6
CACNA1A-220ENST00000635988 SRSF9Q13242 221 aaKnown RBP eCLIP11.31□□□□□ -0.6
CACNA1A-220ENST00000635988 BAALCQ8WXS3 180 aa11.31□□□□□ -0.6
CACNA1A-220ENST00000635988 KLK15Q9H2R5 256 aa11.31□□□□□ -0.6
CACNA1A-220ENST00000635988 PAPPA-AS1Q5QFB9 102 aa11.31□□□□□ -0.6
CACNA1A-220ENST00000635988 C2orf66Q6UXQ4 117 aa11.31□□□□□ -0.6
CACNA1A-220ENST00000635988 RASL10AQ92737 203 aa11.31□□□□□ -0.6
CACNA1A-220ENST00000635988 EEF1AKMT3Q96AZ1 226 aa11.31□□□□□ -0.6
CACNA1A-220ENST00000635988 TRAV26-1A0A087WT03 109 aa11.3□□□□□ -0.6
CACNA1A-220ENST00000635988 ECSCRQ19T08 205 aa11.3□□□□□ -0.6
CACNA1A-220ENST00000635988 Q8NA96 180 aa11.3□□□□□ -0.6
CACNA1A-220ENST00000635988 U3KQE9 123 aa11.3□□□□□ -0.6
CACNA1A-220ENST00000635988 TRBV7-1A0A0A6YYK4 115 aa11.3□□□□□ -0.6
CACNA1A-220ENST00000635988 PRSS29PA6NIE9 313 aa11.3□□□□□ -0.6
CACNA1A-220ENST00000635988 CRYBA4P53673 196 aa11.3□□□□□ -0.6
CACNA1A-220ENST00000635988 CLEC19AQ6UXS0 136 aa11.3□□□□□ -0.6
CACNA1A-220ENST00000635988 SYT8Q8NBV8 401 aa11.3□□□□□ -0.6
CACNA1A-220ENST00000635988 VKORC1Q9BQB6 163 aa11.3□□□□□ -0.6
CACNA1A-220ENST00000635988 MED14OSP0DP75 135 aa11.29□□□□□ -0.6
CACNA1A-220ENST00000635988 C9orf139Q6ZV77 190 aa11.29□□□□□ -0.6
CACNA1A-220ENST00000635988 LINC01560Q8TB33 94 aa11.29□□□□□ -0.6
CACNA1A-220ENST00000635988 CCDC140Q96MF4 163 aa11.29□□□□□ -0.6
CACNA1A-220ENST00000635988 ZZEF1O43149 2961 aa11.29□□□□□ -0.6
CACNA1A-220ENST00000635988 TRAV21A0A0B4J279 112 aa11.29□□□□□ -0.6
CACNA1A-220ENST00000635988 UBE2D3P61077 147 aa11.29□□□□□ -0.6
CACNA1A-220ENST00000635988 HERVK_113P61574 105 aa11.29□□□□□ -0.6
CACNA1A-220ENST00000635988 UBE2D2P62837 147 aa11.29□□□□□ -0.6
CACNA1A-220ENST00000635988 C16orf92Q96LL3 132 aa11.29□□□□□ -0.6
CACNA1A-220ENST00000635988 LINC00477Q96M19 166 aa11.29□□□□□ -0.6
CACNA1A-220ENST00000635988 IGHV3OR16-13A0A075B7E8 117 aa11.28□□□□□ -0.6
CACNA1A-220ENST00000635988 IGHV3-74A0A0B4J1X5 117 aa11.28□□□□□ -0.6
CACNA1A-220ENST00000635988 LOC107984156A0A0G2JMH3 177 aa11.28□□□□□ -0.6
CACNA1A-220ENST00000635988 TSPAN13O95857 204 aa11.28□□□□□ -0.6
CACNA1A-220ENST00000635988 COX6B1P14854 86 aa11.28□□□□□ -0.6
CACNA1A-220ENST00000635988 S100A4P26447 101 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-220ENST00000635988 ASIPP42127 132 aa11.28□□□□□ -0.6
CACNA1A-220ENST00000635988 SMCPP49901 116 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-220ENST00000635988 ARL17AQ8IVW1 177 aa11.28□□□□□ -0.6
CACNA1A-220ENST00000635988 ZNF418Q8TF45 676 aaPredicted RBP11.28□□□□□ -0.6
CACNA1A-220ENST00000635988 TRBV20-1A0A075B6N2 111 aa11.28□□□□□ -0.6
CACNA1A-220ENST00000635988 PSMB2P49721 201 aa11.28□□□□□ -0.6
CACNA1A-220ENST00000635988 PPDPFLQ8WWR9 84 aa11.28□□□□□ -0.6
CACNA1A-220ENST00000635988 CDIP1Q9H305 208 aa11.28□□□□□ -0.6
CACNA1A-220ENST00000635988 IGHV1-69DA0A0B4J2H0 117 aa11.27□□□□□ -0.61
CACNA1A-220ENST00000635988 ATP6V0E1O15342 81 aa11.27□□□□□ -0.61
CACNA1A-220ENST00000635988 PHLDA3Q9Y5J5 127 aa11.27□□□□□ -0.61
CACNA1A-220ENST00000635988 CD7P09564 240 aa11.27□□□□□ -0.61
CACNA1A-220ENST00000635988 SPINK8P0C7L1 97 aa11.26□□□□□ -0.61
CACNA1A-220ENST00000635988 TEN1Q86WV5 123 aa11.26□□□□□ -0.61
CACNA1A-220ENST00000635988 RPL39LQ96EH5 51 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-220ENST00000635988 GEMIN7Q9H840 131 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-220ENST00000635988 CEP250Q9BV73 2442 aa11.26□□□□□ -0.61
CACNA1A-220ENST00000635988 LY6HO94772 140 aa11.26□□□□□ -0.61
CACNA1A-220ENST00000635988 PRR9Q5T870 116 aa11.26□□□□□ -0.61
CACNA1A-220ENST00000635988 Q6ZQT7 251 aa11.26□□□□□ -0.61
CACNA1A-220ENST00000635988 C14orf178Q8N769 122 aaPredicted RBP11.26□□□□□ -0.61
CACNA1A-220ENST00000635988 TPRP12270 2363 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-220ENST00000635988 ZNF318Q5VUA4 2279 aa11.25□□□□□ -0.61
CACNA1A-220ENST00000635988 SMG1Q96Q15 3661 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-220ENST00000635988 IGHV3-49A0A0A0MS15 119 aa11.25□□□□□ -0.61
CACNA1A-220ENST00000635988 OVOL1O14753 267 aa11.25□□□□□ -0.61
CACNA1A-220ENST00000635988 RPL32P62910 135 aaKnown RBP11.25□□□□□ -0.61
CACNA1A-220ENST00000635988 NFE4Q86UQ8 179 aa11.25□□□□□ -0.61
CACNA1A-220ENST00000635988 OR10J6PQ8NGY7 276 aa11.25□□□□□ -0.61
CACNA1A-220ENST00000635988 ITLN2Q8WWU7 325 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-220ENST00000635988 PLEKHB2Q96CS7 222 aa11.25□□□□□ -0.61
CACNA1A-220ENST00000635988 MGPP08493 103 aa11.25□□□□□ -0.61
CACNA1A-220ENST00000635988 FBXL19-AS1Q494R0 122 aa11.25□□□□□ -0.61
CACNA1A-220ENST00000635988 NDUFA11Q86Y39 141 aa11.25□□□□□ -0.61
CACNA1A-220ENST00000635988 ZFAND2AQ8N6M9 145 aa11.25□□□□□ -0.61
CACNA1A-220ENST00000635988 PCNX1Q96RV3 2341 aa11.25□□□□□ -0.61
CACNA1A-220ENST00000635988 CFAP47Q6ZTR5 3102 aa11.24□□□□□ -0.61
CACNA1A-220ENST00000635988 RNF223E7ERA6 249 aa11.24□□□□□ -0.61
CACNA1A-220ENST00000635988 GLMPQ8WWB7 406 aa11.24□□□□□ -0.61
CACNA1A-220ENST00000635988 A0A0J9YY99 117 aa11.24□□□□□ -0.61
CACNA1A-220ENST00000635988 ZFP2Q6ZN57 461 aa11.24□□□□□ -0.61
CACNA1A-220ENST00000635988 Q6ZUT4 128 aa11.23□□□□□ -0.61
CACNA1A-220ENST00000635988 SBSPONQ8IVN8 264 aa11.23□□□□□ -0.61
CACNA1A-220ENST00000635988 POM121L12Q8N7R1 296 aa11.23□□□□□ -0.61
CACNA1A-220ENST00000635988 BOD1L1Q8NFC6 3051 aa11.23□□□□□ -0.61
CACNA1A-220ENST00000635988 A8MWV9 139 aa11.23□□□□□ -0.61
CACNA1A-220ENST00000635988 PMVKQ15126 192 aa11.23□□□□□ -0.61
CACNA1A-220ENST00000635988 TMEM141Q96I45 108 aa11.23□□□□□ -0.61
CACNA1A-220ENST00000635988 SIRPDQ9H106 197 aa11.23□□□□□ -0.61
CACNA1A-220ENST00000635988 POLEQ07864 2286 aa11.22□□□□□ -0.61
CACNA1A-220ENST00000635988 CRYGDP07320 174 aa11.22□□□□□ -0.61
CACNA1A-220ENST00000635988 C11orf86A6NJI1 115 aa11.22□□□□□ -0.61
CACNA1A-220ENST00000635988 G3V318 75 aa11.22□□□□□ -0.61
CACNA1A-220ENST00000635988 UBE2E1P51965 193 aa11.22□□□□□ -0.61
CACNA1A-220ENST00000635988 ANXA2RQ3ZCQ2 193 aa11.22□□□□□ -0.61
CACNA1A-220ENST00000635988 PRR30Q53SZ7 412 aaPredicted RBP11.22□□□□□ -0.61
CACNA1A-220ENST00000635988 GPHB5Q86YW7 130 aa11.22□□□□□ -0.61
CACNA1A-220ENST00000635988 KLHL30-AS1Q8NEE0 82 aa11.22□□□□□ -0.61
CACNA1A-220ENST00000635988 ASPMQ8IZT6 3477 aa11.21□□□□□ -0.61
CACNA1A-220ENST00000635988 ARHGAP32A7KAX9 2087 aa11.21□□□□□ -0.61
CACNA1A-220ENST00000635988 IGHV4OR15-8A0A075B7B6 117 aa11.21□□□□□ -0.61
CACNA1A-220ENST00000635988 A0A087WW49 117 aa11.21□□□□□ -0.61
CACNA1A-220ENST00000635988 TRBV7-9A0A0J9YWB2 115 aa11.21□□□□□ -0.61
CACNA1A-220ENST00000635988 FAM90A27PA6NNH2 459 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms