RNA–Protein interactions for RNA: ENST00000631029.1

UBA3-213, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 5 BASIC

Gene UBA3, Length 123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-213	ENST00000631029		A0A087WW49	117 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	TRAV40	A0A0B4J280	105 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	IGHV1-69D	A0A0B4J2H0	117 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	LINC01549	A6NIU2	74 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	CCL21	O00585	134 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	OVOL1	O14753	267 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	ZNF207	O43670	478 aa	Known RBP	4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	IGF1	P05019	195 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	PRSS1	P07477	247 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	SCGB1A1	P11684	91 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	COX6B1	P14854	86 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	GCSH	P23434	173 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	PPIF	P30405	207 aa	Known RBP	4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	SAA4	P35542	130 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	LINC00315	P59091	139 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	C12orf74	Q32Q52	190 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	CLEC19A	Q6UXS0	136 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	GTSCR1	Q86UQ5	136 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	WFDC3	Q8IUB2	231 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	MYOZ3	Q8TDC0	251 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	C20orf173	Q96LM9	149 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	PRORY	Q9H606	182 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	ZNF580	Q9UK33	172 aa		4.59	□□□□□ -1.67
UBA3-213	ENST00000631029	APC2	O95996	2303 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	TRAV21	A0A0B4J279	112 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	LINC01548	A6NM66	108 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	TMEM238	C9JI98	176 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029		F8W1H4	67 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029		G3V318	75 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	NDUFA4	O00483	81 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	NPFF	O15130	113 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	RNASE3	P12724	160 aa	Known RBP	4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	UBE2D1	P51668	147 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	EFNA4	P52798	201 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	SUMO2	P61956	95 aa	Known RBP	4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	KLRB1	Q12918	225 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	ECSCR	Q19T08	205 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	RRN3P1	Q2M238	152 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029		Q6ZQT7	251 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	RAB37	Q96AX2	223 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	SPATA25	Q9BR10	227 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	NAA38	Q9BRA0	125 aa	Known RBP	4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	DPH3P1	Q9H4G8	78 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	MOB4	Q9Y3A3	225 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	ROS1	P08922	2347 aa		4.58	□□□□□ -1.68
UBA3-213	ENST00000631029	ANKHD1	Q8IWZ3	2542 aa	Known RBP	4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	ABCA1	O95477	2261 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	SETX	Q7Z333	2677 aa	Known RBP	4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	IGHV3OR16-8	A0A075B7F1	116 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	TRAV26-2	A0A0B4J265	109 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	TRAV41	A0A0B4J266	112 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	TRBV6-5	A0A0K0K1A5	114 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	MYMX	A0A1B0GTQ4	84 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	TEX48	A0A1B0GUV7	120 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	KLLN	B2CW77	178 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029		H3BVH4	76 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029		K7ERJ3	54 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	PPP1R17	O96001	155 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	UCN	P55089	124 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	RIPPLY3	P57055	190 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	ATP5G2	Q06055	141 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	MORN3	Q6PF18	240 aa	Predicted RBP	4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	LCNL1	Q6ZST4	164 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	RNF152	Q8N8N0	203 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	ATP6V0E2	Q8NHE4	81 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	BAALC	Q8WXS3	180 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	TMEM160	Q9NX00	188 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	NHP2	Q9NX24	153 aa	Known RBP	4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	POLE	Q07864	2286 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	PIEZO2	Q9H5I5	2752 aa		4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	GCN1	Q92616	2671 aa	Known RBP	4.57	□□□□□ -1.68
UBA3-213	ENST00000631029	BOD1L1	Q8NFC6	3051 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	IGSF10	Q6WRI0	2623 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	MGA	Q8IWI9	3026 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	IGLV4-69	A0A075B6H9	119 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	IGHV3-35	A0A0C4DH35	117 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	IGIP	A6NJ69	53 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	OR11H12	B2RN74	326 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	IGHG2	P01859	326 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	CRYGD	P07320	174 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	LGALS1	P09382	135 aa	Known RBP	4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	ASIP	P42127	132 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	POLR2K	P53803	58 aa	Known RBP	4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	TCTA	P57738	103 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	CFHR3	Q02985	330 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	LY6D	Q14210	128 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	TM4SF20	Q53R12	229 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	SPANXN1	Q5VSR9	72 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	OR11H1	Q8NG94	326 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	OR11H2	Q8NH07	326 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	USMG5	Q96IX5	58 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	ZNF479	Q96JC4	524 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	C16orf92	Q96LL3	132 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	ODF3	Q96PU9	254 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	SPOCK3	Q9BQ16	436 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	UFC1	Q9Y3C8	167 aa		4.56	□□□□□ -1.68
UBA3-213	ENST00000631029	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms