RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 TRAV1-1A0A0B4J248 108 aa14.08□□□□□ -0.16
PNKP-219ENST00000626274 ZNF80P51504 273 aaPredicted RBP14.08□□□□□ -0.16
PNKP-219ENST00000626274 KCNS1Q96KK3 526 aa14.08□□□□□ -0.16
PNKP-219ENST00000626274 C18orf15Q96N68 181 aa14.08□□□□□ -0.16
PNKP-219ENST00000626274 MDFICQ9P1T7 246 aa14.08□□□□□ -0.16
PNKP-219ENST00000626274 TRGV2A0A075B6R0 118 aa14.07□□□□□ -0.16
PNKP-219ENST00000626274 TEX46H3BTG2 121 aa14.07□□□□□ -0.16
PNKP-219ENST00000626274 PFN1P07737 140 aaKnown RBP14.07□□□□□ -0.16
PNKP-219ENST00000626274 LGALS9BQ3B8N2 356 aa14.07□□□□□ -0.16
PNKP-219ENST00000626274 Q86TA4 180 aa14.07□□□□□ -0.16
PNKP-219ENST00000626274 C15orf53Q8NAA6 179 aa14.07□□□□□ -0.16
PNKP-219ENST00000626274 SDF2L1Q9HCN8 221 aa14.07□□□□□ -0.16
PNKP-219ENST00000626274 GNRH2O43555 120 aa14.06□□□□□ -0.16
PNKP-219ENST00000626274 P0DMU3 169 aa14.06□□□□□ -0.16
PNKP-219ENST00000626274 FAM231AP0DMU4 169 aa14.06□□□□□ -0.16
PNKP-219ENST00000626274 FAM231CP0DMU5 169 aa14.06□□□□□ -0.16
PNKP-219ENST00000626274 UBE2G1P62253 170 aa14.06□□□□□ -0.16
PNKP-219ENST00000626274 FMC1Q96HJ9 113 aa14.06□□□□□ -0.16
PNKP-219ENST00000626274 ZFP30Q9Y2G7 519 aa14.06□□□□□ -0.16
PNKP-219ENST00000626274 TYMSP04818 313 aa14.05□□□□□ -0.16
PNKP-219ENST00000626274 AKR1C3P42330 323 aa14.05□□□□□ -0.16
PNKP-219ENST00000626274 SPXQ9BT56 116 aa14.05□□□□□ -0.16
PNKP-219ENST00000626274 MRPL16Q9NX20 251 aaKnown RBP14.05□□□□□ -0.16
PNKP-219ENST00000626274 IGHV3-16A0A0C4DH30 117 aa14.04□□□□□ -0.16
PNKP-219ENST00000626274 TRBV6-1A0A0K0K1D8 114 aa14.04□□□□□ -0.16
PNKP-219ENST00000626274 CCL20P78556 96 aa14.04□□□□□ -0.16
PNKP-219ENST00000626274 OR5I1Q13606 314 aa14.04□□□□□ -0.16
PNKP-219ENST00000626274 MANBALQ9NQG1 85 aa14.04□□□□□ -0.16
PNKP-219ENST00000626274 GNG13Q9P2W3 67 aa14.04□□□□□ -0.16
PNKP-219ENST00000626274 C11orf21Q9P2W6 132 aa14.04□□□□□ -0.16
PNKP-219ENST00000626274 HOXA5P20719 270 aa14.03□□□□□ -0.16
PNKP-219ENST00000626274 FABP5P3A8MUU1 101 aa14.02□□□□□ -0.17
PNKP-219ENST00000626274 S100A9P06702 114 aaKnown RBP14.02□□□□□ -0.17
PNKP-219ENST00000626274 NKX2-5P52952 324 aaPredicted RBP14.02□□□□□ -0.17
PNKP-219ENST00000626274 HYDINQ4G0P3 5121 aa14.01□□□□□ -0.17
PNKP-219ENST00000626274 SCO2A0A1W2PP80 73 aa14.01□□□□□ -0.17
PNKP-219ENST00000626274 COX8CQ7Z4L0 72 aa14.01□□□□□ -0.17
PNKP-219ENST00000626274 RASL10AQ92737 203 aa14.01□□□□□ -0.17
PNKP-219ENST00000626274 NACAE9PAV3 2078 aa14□□□□□ -0.17
PNKP-219ENST00000626274 TRAV26-1A0A087WT03 109 aa14□□□□□ -0.17
PNKP-219ENST00000626274 M0R2P5 195 aa14□□□□□ -0.17
PNKP-219ENST00000626274 NUDT3O95989 172 aa14□□□□□ -0.17
PNKP-219ENST00000626274 LTAP01374 205 aa14□□□□□ -0.17
PNKP-219ENST00000626274 UBE2DNLQ8IWF7 75 aa14□□□□□ -0.17
PNKP-219ENST00000626274 POM121L12Q8N7R1 296 aa14□□□□□ -0.17
PNKP-219ENST00000626274 ZC2HC1AQ96GY0 325 aa14□□□□□ -0.17
PNKP-219ENST00000626274 TXNDC17Q9BRA2 123 aa14□□□□□ -0.17
PNKP-219ENST00000626274 IFNA1P01562 189 aa13.99□□□□□ -0.17
PNKP-219ENST00000626274 ALKAL2Q6UX46 152 aa13.99□□□□□ -0.17
PNKP-219ENST00000626274 A0A0J9YY99 117 aa13.98□□□□□ -0.17
PNKP-219ENST00000626274 H3BNG1 76 aa13.98□□□□□ -0.17
PNKP-219ENST00000626274 IGHV3-53P01767 116 aa13.98□□□□□ -0.17
PNKP-219ENST00000626274 IGKV3D-20A0A0C4DH25 116 aa13.97□□□□□ -0.17
PNKP-219ENST00000626274 CRIP1P50238 77 aa13.97□□□□□ -0.17
PNKP-219ENST00000626274 RNF212Q495C1 297 aa13.97□□□□□ -0.17
PNKP-219ENST00000626274 FAM162BQ5T6X4 162 aa13.97□□□□□ -0.17
PNKP-219ENST00000626274 C11orf52Q96A22 123 aa13.97□□□□□ -0.17
PNKP-219ENST00000626274 BOLA1Q9Y3E2 137 aa13.97□□□□□ -0.17
PNKP-219ENST00000626274 VPS13DQ5THJ4 4388 aa13.96□□□□□ -0.17
PNKP-219ENST00000626274 SH2D1AO60880 128 aa13.96□□□□□ -0.17
PNKP-219ENST00000626274 ORM1P02763 201 aa13.96□□□□□ -0.17
PNKP-219ENST00000626274 BAGE2Q86Y30 109 aa13.96□□□□□ -0.17
PNKP-219ENST00000626274 C9orf85Q96MD7 179 aa13.96□□□□□ -0.17
PNKP-219ENST00000626274 BLOC1S1P78537 153 aa13.95□□□□□ -0.18
PNKP-219ENST00000626274 MEF2BQ02080 365 aaPredicted RBP13.95□□□□□ -0.18
PNKP-219ENST00000626274 SLAQ13239 276 aa13.95□□□□□ -0.18
PNKP-219ENST00000626274 ZNF674Q2M3X9 581 aa13.95□□□□□ -0.18
PNKP-219ENST00000626274 NHLRC2Q8NBF2 726 aa13.95□□□□□ -0.18
PNKP-219ENST00000626274 VSIG2Q96IQ7 327 aa13.95□□□□□ -0.18
PNKP-219ENST00000626274 B4DEV8 164 aa13.94□□□□□ -0.18
PNKP-219ENST00000626274 BCL2P10415 239 aa13.94□□□□□ -0.18
PNKP-219ENST00000626274 RNASE3P12724 160 aaKnown RBP13.94□□□□□ -0.18
PNKP-219ENST00000626274 S100A4P26447 101 aaKnown RBP13.94□□□□□ -0.18
PNKP-219ENST00000626274 TAGLN2P37802 199 aaKnown RBP13.94□□□□□ -0.18
PNKP-219ENST00000626274 FHL2Q14192 279 aa13.94□□□□□ -0.18
PNKP-219ENST00000626274 PRO0255Q9UI72 69 aa13.94□□□□□ -0.18
PNKP-219ENST00000626274 VAX2Q9UIW0 290 aa13.94□□□□□ -0.18
PNKP-219ENST00000626274 TRAV4A0A0B4J268 109 aa13.93□□□□□ -0.18
PNKP-219ENST00000626274 TRGV4A0A0C4DH28 118 aa13.93□□□□□ -0.18
PNKP-219ENST00000626274 C9JCJ5 164 aa13.93□□□□□ -0.18
PNKP-219ENST00000626274 M0R036 132 aa13.93□□□□□ -0.18
PNKP-219ENST00000626274 PAX4O43316 350 aa13.93□□□□□ -0.18
PNKP-219ENST00000626274 PDE6DO43924 150 aa13.93□□□□□ -0.18
PNKP-219ENST00000626274 SFTA3P0C7M3 94 aa13.93□□□□□ -0.18
PNKP-219ENST00000626274 ASIPP42127 132 aa13.93□□□□□ -0.18
PNKP-219ENST00000626274 RPL35P42766 123 aaKnown RBP13.93□□□□□ -0.18
PNKP-219ENST00000626274 CCL18P55774 89 aa13.93□□□□□ -0.18
PNKP-219ENST00000626274 ZNF876PQ49A33 203 aa13.93□□□□□ -0.18
PNKP-219ENST00000626274 OR4C5Q8NGB2 326 aa13.93□□□□□ -0.18
PNKP-219ENST00000626274 ZNF479Q96JC4 524 aa13.93□□□□□ -0.18
PNKP-219ENST00000626274 MLST8Q9BVC4 326 aa13.93□□□□□ -0.18
PNKP-219ENST00000626274 HHLA3Q9XRX5 114 aa13.93□□□□□ -0.18
PNKP-219ENST00000626274 KRBOX1C9JBD0 128 aa13.92□□□□□ -0.18
PNKP-219ENST00000626274 FAM3BP58499 235 aaPredicted RBP13.92□□□□□ -0.18
PNKP-219ENST00000626274 PTH2Q96A98 100 aa13.92□□□□□ -0.18
PNKP-219ENST00000626274 DERL1Q9BUN8 251 aa13.92□□□□□ -0.18
PNKP-219ENST00000626274 CRYBA4P53673 196 aa13.91□□□□□ -0.18
PNKP-219ENST00000626274 LINC01559Q495D7 138 aa13.91□□□□□ -0.18
PNKP-219ENST00000626274 DNLZQ5SXM8 178 aa13.91□□□□□ -0.18
PNKP-219ENST00000626274 IL36BQ9NZH7 164 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms