RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 SMIM12Q96EX1 92 aa6.17□□□□□ -1.42
SGMS1-211ENST00000626236 NAT8Q9UHE5 227 aa6.17□□□□□ -1.42
SGMS1-211ENST00000626236 TP53TG1Q9Y2A0 90 aa6.17□□□□□ -1.42
SGMS1-211ENST00000626236 COL7A1Q02388 2944 aa6.17□□□□□ -1.42
SGMS1-211ENST00000626236 HUWE1Q7Z6Z7 4374 aaKnown RBP6.16□□□□□ -1.42
SGMS1-211ENST00000626236 IGHV1OR15-1A0A075B7D0 117 aa6.16□□□□□ -1.42
SGMS1-211ENST00000626236 TMEM218A2RU14 115 aa6.16□□□□□ -1.42
SGMS1-211ENST00000626236 CBY3A6NI87 242 aa6.16□□□□□ -1.42
SGMS1-211ENST00000626236 OR5I1Q13606 314 aa6.16□□□□□ -1.42
SGMS1-211ENST00000626236 ADIRFQ15847 76 aa6.16□□□□□ -1.42
SGMS1-211ENST00000626236 ANXA2RQ3ZCQ2 193 aa6.16□□□□□ -1.42
SGMS1-211ENST00000626236 LINC01551Q86U37 167 aa6.16□□□□□ -1.42
SGMS1-211ENST00000626236 DAZAP1Q96EP5 407 aaKnown RBP6.16□□□□□ -1.42
SGMS1-211ENST00000626236 PYGO2Q9BRQ0 406 aa6.16□□□□□ -1.42
SGMS1-211ENST00000626236 BIN3Q9NQY0 253 aa6.16□□□□□ -1.42
SGMS1-211ENST00000626236 LY96Q9Y6Y9 160 aa6.16□□□□□ -1.42
SGMS1-211ENST00000626236 X6R8D5 127 aa6.16□□□□□ -1.42
SGMS1-211ENST00000626236 SMIM9A6NGZ8 99 aa6.15□□□□□ -1.42
SGMS1-211ENST00000626236 B4DEV8 164 aa6.15□□□□□ -1.42
SGMS1-211ENST00000626236 F8W036 122 aa6.15□□□□□ -1.42
SGMS1-211ENST00000626236 M0R036 132 aa6.15□□□□□ -1.42
SGMS1-211ENST00000626236 ORM1P02763 201 aa6.15□□□□□ -1.42
SGMS1-211ENST00000626236 NHLRC4P0CG21 123 aaPredicted RBP6.15□□□□□ -1.42
SGMS1-211ENST00000626236 RPL23P62829 140 aaKnown RBP6.15□□□□□ -1.42
SGMS1-211ENST00000626236 RRN3P1Q2M238 152 aa6.15□□□□□ -1.42
SGMS1-211ENST00000626236 SLC7A5P1Q8MH63 180 aa6.15□□□□□ -1.42
SGMS1-211ENST00000626236 NEU1Q99519 415 aa6.15□□□□□ -1.42
SGMS1-211ENST00000626236 RNASE7Q9H1E1 156 aaKnown RBP6.15□□□□□ -1.42
SGMS1-211ENST00000626236 SDF2L1Q9HCN8 221 aa6.15□□□□□ -1.42
SGMS1-211ENST00000626236 C11orf21Q9P2W6 132 aa6.15□□□□□ -1.42
SGMS1-211ENST00000626236 TP53TG3Q9ULZ0 132 aa6.15□□□□□ -1.42
SGMS1-211ENST00000626236 TMSB15BA0A087X1C1 80 aa6.14□□□□□ -1.43
SGMS1-211ENST00000626236 IGKV3D-20A0A0C4DH25 116 aa6.14□□□□□ -1.43
SGMS1-211ENST00000626236 IGHV4-28A0A0C4DH34 117 aa6.14□□□□□ -1.43
SGMS1-211ENST00000626236 C19orf71A6NCJ1 209 aa6.14□□□□□ -1.43
SGMS1-211ENST00000626236 DEFB4AO15263 64 aa6.14□□□□□ -1.43
SGMS1-211ENST00000626236 GNRH2O43555 120 aa6.14□□□□□ -1.43
SGMS1-211ENST00000626236 P01737 135 aa6.14□□□□□ -1.43
SGMS1-211ENST00000626236 TYMSP04818 313 aa6.14□□□□□ -1.43
SGMS1-211ENST00000626236 MIFP14174 115 aa6.14□□□□□ -1.43
SGMS1-211ENST00000626236 ADCYAP1P18509 176 aa6.14□□□□□ -1.43
SGMS1-211ENST00000626236 AZU1P20160 251 aa6.14□□□□□ -1.43
SGMS1-211ENST00000626236 RPL19P84098 196 aaKnown RBP6.14□□□□□ -1.43
SGMS1-211ENST00000626236 NDUFA5Q16718 116 aa6.14□□□□□ -1.43
SGMS1-211ENST00000626236 IBA57Q5T440 356 aaKnown RBP6.14□□□□□ -1.43
SGMS1-211ENST00000626236 KCNS1Q96KK3 526 aa6.14□□□□□ -1.43
SGMS1-211ENST00000626236 LINC00467Q9BRT7 94 aa6.14□□□□□ -1.43
SGMS1-211ENST00000626236 TRGV11A0A075B6L2 103 aa6.13□□□□□ -1.43
SGMS1-211ENST00000626236 GRIFINA4D1Z8 144 aa6.13□□□□□ -1.43
SGMS1-211ENST00000626236 TMEM189A5PLL7 270 aa6.13□□□□□ -1.43
SGMS1-211ENST00000626236 KRBOX1C9JBD0 128 aa6.13□□□□□ -1.43
SGMS1-211ENST00000626236 EMP1P54849 157 aa6.13□□□□□ -1.43
SGMS1-211ENST00000626236 ERVFC1-1P60608 527 aa6.13□□□□□ -1.43
SGMS1-211ENST00000626236 TDRG1Q3Y452 100 aa6.13□□□□□ -1.43
SGMS1-211ENST00000626236 Q8NAQ8 132 aa6.13□□□□□ -1.43
SGMS1-211ENST00000626236 NUDT10Q8NFP7 164 aa6.13□□□□□ -1.43
SGMS1-211ENST00000626236 RNASE8Q8TDE3 154 aaKnown RBP6.13□□□□□ -1.43
SGMS1-211ENST00000626236 TMEM263Q8WUH6 116 aaKnown RBP6.13□□□□□ -1.43
SGMS1-211ENST00000626236 ISOC2Q96AB3 205 aa6.13□□□□□ -1.43
SGMS1-211ENST00000626236 NUDT11Q96G61 164 aa6.13□□□□□ -1.43
SGMS1-211ENST00000626236 C16orf74Q96GX8 76 aa6.13□□□□□ -1.43
SGMS1-211ENST00000626236 SEC11CQ9BY50 192 aa6.13□□□□□ -1.43
SGMS1-211ENST00000626236 MDFICQ9P1T7 246 aa6.13□□□□□ -1.43
SGMS1-211ENST00000626236 TENM3Q9P273 2699 aa6.12□□□□□ -1.43
SGMS1-211ENST00000626236 IGHV3-16A0A0C4DH30 117 aa6.12□□□□□ -1.43
SGMS1-211ENST00000626236 A0A0J9YWU9 116 aa6.12□□□□□ -1.43
SGMS1-211ENST00000626236 SNURFLB1AK76 121 aa6.12□□□□□ -1.43
SGMS1-211ENST00000626236 GATCO43716 136 aaKnown RBP6.12□□□□□ -1.43
SGMS1-211ENST00000626236 S100A4P26447 101 aaKnown RBP6.12□□□□□ -1.43
SGMS1-211ENST00000626236 ASIPP42127 132 aa6.12□□□□□ -1.43
SGMS1-211ENST00000626236 ZNF415Q09FC8 603 aa6.12□□□□□ -1.43
SGMS1-211ENST00000626236 PNRC1Q12796 327 aaPredicted RBP6.12□□□□□ -1.43
SGMS1-211ENST00000626236 ZNF493Q6ZR52 646 aa6.12□□□□□ -1.43
SGMS1-211ENST00000626236 FAM231DQ6ZW35 169 aa6.12□□□□□ -1.43
SGMS1-211ENST00000626236 C15orf54Q8N8G6 183 aa6.12□□□□□ -1.43
SGMS1-211ENST00000626236 C11orf72Q8NBR9 251 aa6.12□□□□□ -1.43
SGMS1-211ENST00000626236 OR2D3Q8NGH3 330 aa6.12□□□□□ -1.43
SGMS1-211ENST00000626236 SFRP2Q96HF1 295 aa6.12□□□□□ -1.43
SGMS1-211ENST00000626236 RPP21Q9H633 154 aaKnown RBP6.12□□□□□ -1.43
SGMS1-211ENST00000626236 GSN-AS1Q9NRJ2 163 aa6.12□□□□□ -1.43
SGMS1-211ENST00000626236 TIMM8BQ9Y5J9 83 aaPredicted RBP6.12□□□□□ -1.43
SGMS1-211ENST00000626236 PLAC8L1A1L4L8 177 aa6.11□□□□□ -1.43
SGMS1-211ENST00000626236 GZMBP10144 247 aa6.11□□□□□ -1.43
SGMS1-211ENST00000626236 RPS20P60866 119 aaKnown RBP6.11□□□□□ -1.43
SGMS1-211ENST00000626236 C10orf91Q5T1B1 145 aa6.11□□□□□ -1.43
SGMS1-211ENST00000626236 OR10G8Q8NGN5 311 aa6.11□□□□□ -1.43
SGMS1-211ENST00000626236 C11orf68Q9H3H3 251 aaKnown RBP6.11□□□□□ -1.43
SGMS1-211ENST00000626236 U3KQK5 164 aa6.11□□□□□ -1.43
SGMS1-211ENST00000626236 XKRY2A2RUG3 117 aa6.1□□□□□ -1.43
SGMS1-211ENST00000626236 H3BVH4 76 aa6.1□□□□□ -1.43
SGMS1-211ENST00000626236 TCL1AP56279 114 aa6.1□□□□□ -1.43
SGMS1-211ENST00000626236 ZNF575Q86XF7 245 aa6.1□□□□□ -1.43
SGMS1-211ENST00000626236 IL17DQ8TAD2 202 aa6.1□□□□□ -1.43
SGMS1-211ENST00000626236 TPPP3Q9BW30 176 aa6.1□□□□□ -1.43
SGMS1-211ENST00000626236 NOP10Q9NPE3 64 aaKnown RBP6.1□□□□□ -1.43
SGMS1-211ENST00000626236 OSTCQ9NRP0 149 aa6.1□□□□□ -1.43
SGMS1-211ENST00000626236 CARHSP1Q9Y2V2 147 aaKnown RBP6.1□□□□□ -1.43
SGMS1-211ENST00000626236 TRGV1A0A0A0MS02 117 aa6.09□□□□□ -1.43
SGMS1-211ENST00000626236 APOC3P02656 99 aa6.09□□□□□ -1.43
SGMS1-211ENST00000626236 CXCL1P09341 107 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms