RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 SAP30O75446 220 aa15.97■□□□□ 0.15
SPAST-204ENST00000621856 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.97■□□□□ 0.15
SPAST-204ENST00000621856 F2Z2F3 143 aa15.96■□□□□ 0.15
SPAST-204ENST00000621856 TSPOP30536 169 aa15.96■□□□□ 0.15
SPAST-204ENST00000621856 MAP6D1Q9H9H5 199 aa15.96■□□□□ 0.15
SPAST-204ENST00000621856 F8P00451 2351 aa15.95■□□□□ 0.14
SPAST-204ENST00000621856 PF4P02776 101 aa15.95■□□□□ 0.14
SPAST-204ENST00000621856 TWIST1Q15672 202 aa15.95■□□□□ 0.14
SPAST-204ENST00000621856 BAGE3Q86Y29 109 aa15.95■□□□□ 0.14
SPAST-204ENST00000621856 GATD1Q8NB37 220 aa15.95■□□□□ 0.14
SPAST-204ENST00000621856 C7orf71A4D174 169 aa15.94■□□□□ 0.14
SPAST-204ENST00000621856 Q0VG73 95 aa15.94■□□□□ 0.14
SPAST-204ENST00000621856 ANXA2RQ3ZCQ2 193 aa15.94■□□□□ 0.14
SPAST-204ENST00000621856 C2CD3Q4AC94 2353 aa15.94■□□□□ 0.14
SPAST-204ENST00000621856 IFITM10A6NMD0 228 aa15.94■□□□□ 0.14
SPAST-204ENST00000621856 M0R2Z0 102 aa15.94■□□□□ 0.14
SPAST-204ENST00000621856 OR10J3Q5JRS4 329 aa15.94■□□□□ 0.14
SPAST-204ENST00000621856 ZNF256Q9Y2P7 627 aaPredicted RBP15.94■□□□□ 0.14
SPAST-204ENST00000621856 SORL1Q92673 2214 aa15.93■□□□□ 0.14
SPAST-204ENST00000621856 AGRNO00468 2067 aa15.93■□□□□ 0.14
SPAST-204ENST00000621856 TRAV12-3A0A0B4J271 114 aa15.93■□□□□ 0.14
SPAST-204ENST00000621856 HLA-DRB4P13762 266 aa15.93■□□□□ 0.14
SPAST-204ENST00000621856 NTF3P20783 257 aa15.93■□□□□ 0.14
SPAST-204ENST00000621856 SPINK13Q1W4C9 94 aa15.93■□□□□ 0.14
SPAST-204ENST00000621856 TMEM256Q8N2U0 113 aa15.93■□□□□ 0.14
SPAST-204ENST00000621856 HLA-DRB4X5D2U9 266 aa15.93■□□□□ 0.14
SPAST-204ENST00000621856 LOC102724200A0A096LPH7 203 aaPredicted RBP15.92■□□□□ 0.14
SPAST-204ENST00000621856 CDKN1BP46527 198 aa15.92■□□□□ 0.14
SPAST-204ENST00000621856 ZNF124Q15973 351 aa15.92■□□□□ 0.14
SPAST-204ENST00000621856 ALKBH7Q9BT30 221 aaPredicted RBP15.92■□□□□ 0.14
SPAST-204ENST00000621856 BAHCC1Q9P281 2608 aa15.91■□□□□ 0.14
SPAST-204ENST00000621856 TRAV12-2A0A075B6T6 113 aa15.91■□□□□ 0.14
SPAST-204ENST00000621856 H3BVH4 76 aa15.91■□□□□ 0.14
SPAST-204ENST00000621856 FABP4P15090 132 aa15.91■□□□□ 0.14
SPAST-204ENST00000621856 S100A4P26447 101 aaKnown RBP15.91■□□□□ 0.14
SPAST-204ENST00000621856 ASIPP42127 132 aa15.91■□□□□ 0.14
SPAST-204ENST00000621856 ZNF493Q6ZR52 646 aa15.91■□□□□ 0.14
SPAST-204ENST00000621856 CNFNQ9BYD5 112 aa15.91■□□□□ 0.14
SPAST-204ENST00000621856 TP53TG3Q9ULZ0 132 aa15.91■□□□□ 0.14
SPAST-204ENST00000621856 TIMM8BQ9Y5J9 83 aaPredicted RBP15.91■□□□□ 0.14
SPAST-204ENST00000621856 H3BMM0 161 aa15.91■□□□□ 0.14
SPAST-204ENST00000621856 FAM159AQ6UWV7 190 aa15.91■□□□□ 0.14
SPAST-204ENST00000621856 AMTNQ6UX39 209 aa15.91■□□□□ 0.14
SPAST-204ENST00000621856 OR5AL1P0C617 328 aa15.9■□□□□ 0.14
SPAST-204ENST00000621856 SNAI2O43623 268 aa15.89■□□□□ 0.13
SPAST-204ENST00000621856 SERF1AO75920 110 aa15.89■□□□□ 0.13
SPAST-204ENST00000621856 FXYD7P58549 80 aa15.89■□□□□ 0.13
SPAST-204ENST00000621856 OR10AG1Q8NH19 301 aa15.89■□□□□ 0.13
SPAST-204ENST00000621856 C18orf32Q8TCD1 76 aa15.89■□□□□ 0.13
SPAST-204ENST00000621856 HIST1H2BLQ99880 126 aa15.89■□□□□ 0.13
SPAST-204ENST00000621856 MSRB1Q9NZV6 116 aa15.89■□□□□ 0.13
SPAST-204ENST00000621856 CACNG7P62955 275 aa15.88■□□□□ 0.13
SPAST-204ENST00000621856 IQCJQ1A5X6 159 aa15.88■□□□□ 0.13
SPAST-204ENST00000621856 KCNS1Q96KK3 526 aa15.88■□□□□ 0.13
SPAST-204ENST00000621856 CYSRT1A8MQ03 144 aa15.88■□□□□ 0.13
SPAST-204ENST00000621856 A8MTW9 85 aa15.88■□□□□ 0.13
SPAST-204ENST00000621856 GNRH2O43555 120 aa15.88■□□□□ 0.13
SPAST-204ENST00000621856 NUPR1O60356 82 aa15.88■□□□□ 0.13
SPAST-204ENST00000621856 ZNF324O75467 553 aaPredicted RBP15.88■□□□□ 0.13
SPAST-204ENST00000621856 IGLV1-51P01701 117 aa15.88■□□□□ 0.13
SPAST-204ENST00000621856 ODF3L2Q3SX64 289 aa15.88■□□□□ 0.13
SPAST-204ENST00000621856 SPANXN1Q5VSR9 72 aa15.88■□□□□ 0.13
SPAST-204ENST00000621856 LINC00482Q8N8I6 264 aa15.88■□□□□ 0.13
SPAST-204ENST00000621856 OR10D4PQ8NGN7 298 aa15.88■□□□□ 0.13
SPAST-204ENST00000621856 OR11H12B2RN74 326 aa15.87■□□□□ 0.13
SPAST-204ENST00000621856 AMBPP02760 352 aa15.87■□□□□ 0.13
SPAST-204ENST00000621856 FAM104BQ5XKR9 115 aa15.87■□□□□ 0.13
SPAST-204ENST00000621856 AMN1Q8IY45 258 aa15.87■□□□□ 0.13
SPAST-204ENST00000621856 OR2K2Q8NGT1 345 aa15.87■□□□□ 0.13
SPAST-204ENST00000621856 TMEM18Q96B42 140 aa15.87■□□□□ 0.13
SPAST-204ENST00000621856 MED14OSP0DP75 135 aa15.86■□□□□ 0.13
SPAST-204ENST00000621856 LINC00310P59036 64 aa15.86■□□□□ 0.13
SPAST-204ENST00000621856 TMEM191AQ9H0A3 160 aa15.86■□□□□ 0.13
SPAST-204ENST00000621856 RBMY1BA6NDE4 496 aaKnown RBP15.85■□□□□ 0.13
SPAST-204ENST00000621856 RBMY1EA6NEQ0 496 aaKnown RBP15.85■□□□□ 0.13
SPAST-204ENST00000621856 RBMY1DP0C7P1 496 aaKnown RBP15.85■□□□□ 0.13
SPAST-204ENST00000621856 PACRGQ96M98 296 aaPredicted RBP15.85■□□□□ 0.13
SPAST-204ENST00000621856 CD7P09564 240 aa15.85■□□□□ 0.13
SPAST-204ENST00000621856 CMC4P56277 68 aaPredicted RBP15.85■□□□□ 0.13
SPAST-204ENST00000621856 DNLZQ5SXM8 178 aa15.85■□□□□ 0.13
SPAST-204ENST00000621856 SMIM15Q7Z3B0 74 aa15.85■□□□□ 0.13
SPAST-204ENST00000621856 RCHY1Q96PM5 261 aa15.85■□□□□ 0.13
SPAST-204ENST00000621856 ESDP10768 282 aa15.84■□□□□ 0.13
SPAST-204ENST00000621856 PHLDA3Q9Y5J5 127 aa15.84■□□□□ 0.13
SPAST-204ENST00000621856 IGHV4-4A0A075B6R2 117 aa15.83■□□□□ 0.13
SPAST-204ENST00000621856 STHQ8IWL8 128 aa15.83■□□□□ 0.13
SPAST-204ENST00000621856 CITED1Q99966 193 aa15.83■□□□□ 0.13
SPAST-204ENST00000621856 IGHV1OR15-1A0A075B7D0 117 aa15.82■□□□□ 0.12
SPAST-204ENST00000621856 RNASE3P12724 160 aaKnown RBP15.82■□□□□ 0.12
SPAST-204ENST00000621856 MRPL51Q4U2R6 128 aaKnown RBP15.82■□□□□ 0.12
SPAST-204ENST00000621856 LINC00518Q8N0U6 118 aa15.82■□□□□ 0.12
SPAST-204ENST00000621856 M0R381 172 aa15.82■□□□□ 0.12
SPAST-204ENST00000621856 SPRY2O43597 315 aa15.82■□□□□ 0.12
SPAST-204ENST00000621856 TDRG1Q3Y452 100 aa15.82■□□□□ 0.12
SPAST-204ENST00000621856 SAMD10Q9BYL1 202 aa15.82■□□□□ 0.12
SPAST-204ENST00000621856 D6R8Y8 96 aa15.81■□□□□ 0.12
SPAST-204ENST00000621856 DMRTA1Q5VZB9 504 aa15.81■□□□□ 0.12
SPAST-204ENST00000621856 SCRT2Q9NQ03 307 aa15.81■□□□□ 0.12
SPAST-204ENST00000621856 CRXO43186 299 aaPredicted RBP15.8■□□□□ 0.12
SPAST-204ENST00000621856 RNASEKQ6P5S7 137 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms