RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 FER1L6-AS1Q8NA97 138 aa7.9□□□□□ -1.14
VPS11-208ENST00000621676 OR9G4Q8NGQ1 327 aa7.9□□□□□ -1.14
VPS11-208ENST00000621676 IGHV3-16A0A0C4DH30 117 aa7.9□□□□□ -1.14
VPS11-208ENST00000621676 EBLN2Q6P2I7 272 aa7.9□□□□□ -1.14
VPS11-208ENST00000621676 LINC00173Q6ZV60 143 aa7.9□□□□□ -1.14
VPS11-208ENST00000621676 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.9□□□□□ -1.14
VPS11-208ENST00000621676 LINC00482Q8N8I6 264 aa7.9□□□□□ -1.14
VPS11-208ENST00000621676 HIST1H2BLQ99880 126 aa7.9□□□□□ -1.14
VPS11-208ENST00000621676 A0A1B0GUT8 65 aa7.9□□□□□ -1.15
VPS11-208ENST00000621676 D6R8Y8 96 aa7.9□□□□□ -1.15
VPS11-208ENST00000621676 HSBP1O75506 76 aa7.9□□□□□ -1.15
VPS11-208ENST00000621676 ELANEP08246 267 aa7.9□□□□□ -1.15
VPS11-208ENST00000621676 HOXA5P20719 270 aa7.9□□□□□ -1.15
VPS11-208ENST00000621676 SNRPD3P62318 126 aaKnown RBP7.9□□□□□ -1.15
VPS11-208ENST00000621676 TDRG1Q3Y452 100 aa7.9□□□□□ -1.15
VPS11-208ENST00000621676 BORCS7Q96B45 105 aa7.9□□□□□ -1.15
VPS11-208ENST00000621676 MDFICQ9P1T7 246 aa7.9□□□□□ -1.15
VPS11-208ENST00000621676 TP73-AS1Q9UF72 201 aa7.9□□□□□ -1.15
VPS11-208ENST00000621676 AMBPP02760 352 aa7.89□□□□□ -1.15
VPS11-208ENST00000621676 KRTAP10-3P60369 221 aa7.89□□□□□ -1.15
VPS11-208ENST00000621676 HBBP68871 147 aa7.89□□□□□ -1.15
VPS11-208ENST00000621676 TMEM242Q9NWH2 141 aa7.89□□□□□ -1.15
VPS11-208ENST00000621676 RNF24Q9Y225 148 aa7.89□□□□□ -1.15
VPS11-208ENST00000621676 KLF12Q9Y4X4 402 aa7.89□□□□□ -1.15
VPS11-208ENST00000621676 HIST3H2BBQ8N257 126 aa7.88□□□□□ -1.15
VPS11-208ENST00000621676 ZFP30Q9Y2G7 519 aa7.88□□□□□ -1.15
VPS11-208ENST00000621676 PHLDA3Q9Y5J5 127 aa7.88□□□□□ -1.15
VPS11-208ENST00000621676 SMIM27A0A1W2PRY6 76 aa7.88□□□□□ -1.15
VPS11-208ENST00000621676 CKS2P33552 79 aa7.88□□□□□ -1.15
VPS11-208ENST00000621676 PRSS3P2Q8NHM4 247 aa7.88□□□□□ -1.15
VPS11-208ENST00000621676 C19orf71A6NCJ1 209 aa7.88□□□□□ -1.15
VPS11-208ENST00000621676 OVOL1O14753 267 aa7.88□□□□□ -1.15
VPS11-208ENST00000621676 CDX1P47902 265 aaPredicted RBP7.88□□□□□ -1.15
VPS11-208ENST00000621676 DEFA6Q01524 100 aa7.88□□□□□ -1.15
VPS11-208ENST00000621676 SAPCD1Q5SSQ6 148 aa7.88□□□□□ -1.15
VPS11-208ENST00000621676 SLC50A1Q9BRV3 221 aa7.88□□□□□ -1.15
VPS11-208ENST00000621676 ZNF492Q9P255 531 aa7.88□□□□□ -1.15
VPS11-208ENST00000621676 SNAI2O43623 268 aa7.87□□□□□ -1.15
VPS11-208ENST00000621676 PDE6HQ13956 83 aa7.87□□□□□ -1.15
VPS11-208ENST00000621676 FAM159AQ6UWV7 190 aa7.87□□□□□ -1.15
VPS11-208ENST00000621676 DCANP1Q8TF63 244 aa7.87□□□□□ -1.15
VPS11-208ENST00000621676 CBY3A6NI87 242 aa7.87□□□□□ -1.15
VPS11-208ENST00000621676 MAJINQ3KP22 176 aa7.87□□□□□ -1.15
VPS11-208ENST00000621676 PAM16Q9Y3D7 125 aa7.87□□□□□ -1.15
VPS11-208ENST00000621676 ID1P41134 155 aa7.86□□□□□ -1.15
VPS11-208ENST00000621676 IFI27P40305 119 aaPredicted RBP7.86□□□□□ -1.15
VPS11-208ENST00000621676 C9orf139Q6ZV77 190 aa7.86□□□□□ -1.15
VPS11-208ENST00000621676 TCAPO15273 167 aa7.86□□□□□ -1.15
VPS11-208ENST00000621676 PROK1P58294 105 aa7.86□□□□□ -1.15
VPS11-208ENST00000621676 LINC01587Q99440 93 aa7.86□□□□□ -1.15
VPS11-208ENST00000621676 A0A1B0GV90 55 aa7.85□□□□□ -1.15
VPS11-208ENST00000621676 HILS1P60008 231 aa7.85□□□□□ -1.15
VPS11-208ENST00000621676 DEFB125Q8N687 156 aa7.85□□□□□ -1.15
VPS11-208ENST00000621676 C14orf144Q96I85 54 aa7.85□□□□□ -1.15
VPS11-208ENST00000621676 TENM3Q9P273 2699 aa7.85□□□□□ -1.15
VPS11-208ENST00000621676 BMI1P35226 326 aa7.85□□□□□ -1.15
VPS11-208ENST00000621676 KLF5Q13887 457 aaPredicted RBP7.85□□□□□ -1.15
VPS11-208ENST00000621676 OXLD1Q5BKU9 147 aa7.85□□□□□ -1.15
VPS11-208ENST00000621676 NIT1Q86X76 327 aa7.85□□□□□ -1.15
VPS11-208ENST00000621676 LYPD1Q8N2G4 141 aa7.85□□□□□ -1.15
VPS11-208ENST00000621676 PYGO2Q9BRQ0 406 aa7.85□□□□□ -1.15
VPS11-208ENST00000621676 Q9UF83 564 aa7.85□□□□□ -1.15
VPS11-208ENST00000621676 ZFAND2AQ8N6M9 145 aa7.85□□□□□ -1.15
VPS11-208ENST00000621676 C18orf32Q8TCD1 76 aa7.85□□□□□ -1.15
VPS11-208ENST00000621676 U3KQE9 123 aa7.85□□□□□ -1.15
VPS11-208ENST00000621676 P0DMU3 169 aa7.84□□□□□ -1.15
VPS11-208ENST00000621676 FAM231AP0DMU4 169 aa7.84□□□□□ -1.15
VPS11-208ENST00000621676 FAM231CP0DMU5 169 aa7.84□□□□□ -1.15
VPS11-208ENST00000621676 BATFQ16520 125 aa7.84□□□□□ -1.15
VPS11-208ENST00000621676 FOSL1P15407 271 aa7.84□□□□□ -1.15
VPS11-208ENST00000621676 BTF3P20290 206 aaKnown RBP7.84□□□□□ -1.15
VPS11-208ENST00000621676 LINC00310P59036 64 aa7.84□□□□□ -1.15
VPS11-208ENST00000621676 C1orf194Q5T5A4 169 aa7.84□□□□□ -1.15
VPS11-208ENST00000621676 ZNF256Q9Y2P7 627 aaPredicted RBP7.84□□□□□ -1.15
VPS11-208ENST00000621676 RIGQ13278 110 aa7.83□□□□□ -1.16
VPS11-208ENST00000621676 DEFB114Q30KQ6 69 aa7.83□□□□□ -1.16
VPS11-208ENST00000621676 Q8N1Y9 231 aa7.83□□□□□ -1.16
VPS11-208ENST00000621676 RPL39LQ96EH5 51 aaKnown RBP7.83□□□□□ -1.16
VPS11-208ENST00000621676 KCNS1Q96KK3 526 aa7.83□□□□□ -1.16
VPS11-208ENST00000621676 NPYP01303 97 aa7.83□□□□□ -1.16
VPS11-208ENST00000621676 HLA-DQA1P01909 254 aa7.83□□□□□ -1.16
VPS11-208ENST00000621676 STHQ8IWL8 128 aa7.83□□□□□ -1.16
VPS11-208ENST00000621676 A8MWP6 167 aa7.83□□□□□ -1.16
VPS11-208ENST00000621676 S100A7P31151 101 aa7.83□□□□□ -1.16
VPS11-208ENST00000621676 TMEM18Q96B42 140 aa7.83□□□□□ -1.16
VPS11-208ENST00000621676 PEMTQ9UBM1 199 aa7.83□□□□□ -1.16
VPS11-208ENST00000621676 TSSC4Q9Y5U2 329 aaPredicted RBP7.83□□□□□ -1.16
VPS11-208ENST00000621676 PRELID3AQ96N28 172 aa7.82□□□□□ -1.16
VPS11-208ENST00000621676 IGHV3-38A0A0C4DH36 116 aa7.82□□□□□ -1.16
VPS11-208ENST00000621676 RBMY1A1P0DJD3 496 aaKnown RBP7.82□□□□□ -1.16
VPS11-208ENST00000621676 RBMY1CP0DJD4 496 aa7.82□□□□□ -1.16
VPS11-208ENST00000621676 IGLL1P15814 213 aa7.82□□□□□ -1.16
VPS11-208ENST00000621676 RBMY1FQ15415 496 aaKnown RBP7.82□□□□□ -1.16
VPS11-208ENST00000621676 MRPL51Q4U2R6 128 aaKnown RBP7.82□□□□□ -1.16
VPS11-208ENST00000621676 Q6ZWC4 215 aa7.82□□□□□ -1.16
VPS11-208ENST00000621676 C4orf3Q8WVX3 66 aa7.82□□□□□ -1.16
VPS11-208ENST00000621676 GNB1LQ9BYB4 327 aa7.82□□□□□ -1.16
VPS11-208ENST00000621676 MRPL16Q9NX20 251 aaKnown RBP7.82□□□□□ -1.16
VPS11-208ENST00000621676 H3BUA1 57 aa7.81□□□□□ -1.16
VPS11-208ENST00000621676 K7EQG2 157 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms