RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 GAGE12FP0CL80 117 aa12.92□□□□□ -0.34
LITAF-220ENST00000620789 GAGE12GP0CL81 117 aa12.92□□□□□ -0.34
LITAF-220ENST00000620789 GAGE12IP0CL82 117 aa12.92□□□□□ -0.34
LITAF-220ENST00000620789 Q6ZTI0 123 aa12.92□□□□□ -0.34
LITAF-220ENST00000620789 KCNS1Q96KK3 526 aa12.92□□□□□ -0.34
LITAF-220ENST00000620789 FAM210BQ96KR6 192 aa12.92□□□□□ -0.34
LITAF-220ENST00000620789 MDFICQ9P1T7 246 aa12.92□□□□□ -0.34
LITAF-220ENST00000620789 SPINK4O60575 86 aa12.91□□□□□ -0.34
LITAF-220ENST00000620789 LTAP01374 205 aa12.91□□□□□ -0.34
LITAF-220ENST00000620789 IFNA1P01562 189 aa12.91□□□□□ -0.34
LITAF-220ENST00000620789 S100A9P06702 114 aaKnown RBP12.91□□□□□ -0.34
LITAF-220ENST00000620789 COX8CQ7Z4L0 72 aa12.91□□□□□ -0.34
LITAF-220ENST00000620789 LINC00476Q8WZB0 136 aa12.91□□□□□ -0.34
LITAF-220ENST00000620789 TXNDC17Q9BRA2 123 aa12.91□□□□□ -0.34
LITAF-220ENST00000620789 SDF2L1Q9HCN8 221 aa12.91□□□□□ -0.34
LITAF-220ENST00000620789 C11orf21Q9P2W6 132 aa12.91□□□□□ -0.34
LITAF-220ENST00000620789 DNAH1Q9P2D7 4330 aa12.9□□□□□ -0.34
LITAF-220ENST00000620789 TRGV1A0A0A0MS02 117 aa12.9□□□□□ -0.34
LITAF-220ENST00000620789 GNRH2O43555 120 aa12.9□□□□□ -0.34
LITAF-220ENST00000620789 TYMSP04818 313 aa12.9□□□□□ -0.34
LITAF-220ENST00000620789 BLOC1S1P78537 153 aa12.9□□□□□ -0.34
LITAF-220ENST00000620789 NDUFAF3Q9BU61 184 aa12.9□□□□□ -0.34
LITAF-220ENST00000620789 RYR2Q92736 4967 aa12.89□□□□□ -0.35
LITAF-220ENST00000620789 IGHV3-16A0A0C4DH30 117 aa12.89□□□□□ -0.35
LITAF-220ENST00000620789 BCL2P10415 239 aa12.89□□□□□ -0.35
LITAF-220ENST00000620789 LGALS9BQ3B8N2 356 aa12.89□□□□□ -0.35
LITAF-220ENST00000620789 C11orf52Q96A22 123 aa12.89□□□□□ -0.35
LITAF-220ENST00000620789 ZC2HC1AQ96GY0 325 aa12.89□□□□□ -0.35
LITAF-220ENST00000620789 C18orf15Q96N68 181 aa12.89□□□□□ -0.35
LITAF-220ENST00000620789 SPXQ9BT56 116 aa12.89□□□□□ -0.35
LITAF-220ENST00000620789 TRGV2A0A075B6R0 118 aa12.88□□□□□ -0.35
LITAF-220ENST00000620789 FABP5P3A8MUU1 101 aa12.88□□□□□ -0.35
LITAF-220ENST00000620789 F5H768 121 aa12.88□□□□□ -0.35
LITAF-220ENST00000620789 MEF2BQ02080 365 aaPredicted RBP12.88□□□□□ -0.35
LITAF-220ENST00000620789 TMEM88Q6PEY1 159 aa12.88□□□□□ -0.35
LITAF-220ENST00000620789 MRPL16Q9NX20 251 aaKnown RBP12.88□□□□□ -0.35
LITAF-220ENST00000620789 LY6G6CO95867 125 aa12.87□□□□□ -0.35
LITAF-220ENST00000620789 TAGLN2P37802 199 aaKnown RBP12.87□□□□□ -0.35
LITAF-220ENST00000620789 CRIP1P50238 77 aa12.87□□□□□ -0.35
LITAF-220ENST00000620789 LGALS9CQ6DKI2 356 aa12.87□□□□□ -0.35
LITAF-220ENST00000620789 PDE6DO43924 150 aa12.86□□□□□ -0.35
LITAF-220ENST00000620789 RPL35P42766 123 aaKnown RBP12.86□□□□□ -0.35
LITAF-220ENST00000620789 LYPD6BQ8NI32 183 aa12.86□□□□□ -0.35
LITAF-220ENST00000620789 VAX2Q9UIW0 290 aa12.86□□□□□ -0.35
LITAF-220ENST00000620789 IGKV3D-20A0A0C4DH25 116 aa12.85□□□□□ -0.35
LITAF-220ENST00000620789 SH2D1AO60880 128 aa12.85□□□□□ -0.35
LITAF-220ENST00000620789 ZNF674Q2M3X9 581 aa12.85□□□□□ -0.35
LITAF-220ENST00000620789 FAM162BQ5T6X4 162 aa12.85□□□□□ -0.35
LITAF-220ENST00000620789 BAGE2Q86Y30 109 aa12.85□□□□□ -0.35
LITAF-220ENST00000620789 NHLRC2Q8NBF2 726 aa12.85□□□□□ -0.35
LITAF-220ENST00000620789 DERL1Q9BUN8 251 aa12.85□□□□□ -0.35
LITAF-220ENST00000620789 HOXA5P20719 270 aa12.84□□□□□ -0.35
LITAF-220ENST00000620789 RASL10AQ92737 203 aa12.84□□□□□ -0.35
LITAF-220ENST00000620789 MLST8Q9BVC4 326 aa12.84□□□□□ -0.35
LITAF-220ENST00000620789 M0R2P5 195 aa12.83□□□□□ -0.36
LITAF-220ENST00000620789 ORM1P02763 201 aa12.83□□□□□ -0.36
LITAF-220ENST00000620789 OR5I1Q13606 314 aa12.83□□□□□ -0.36
LITAF-220ENST00000620789 C15orf53Q8NAA6 179 aa12.83□□□□□ -0.36
LITAF-220ENST00000620789 HYDINQ4G0P3 5121 aa12.83□□□□□ -0.36
LITAF-220ENST00000620789 B4DEV8 164 aa12.82□□□□□ -0.36
LITAF-220ENST00000620789 C9orf85Q96MD7 179 aa12.82□□□□□ -0.36
LITAF-220ENST00000620789 MED9Q9NWA0 146 aa12.82□□□□□ -0.36
LITAF-220ENST00000620789 KRBOX1C9JBD0 128 aa12.81□□□□□ -0.36
LITAF-220ENST00000620789 M0R036 132 aa12.81□□□□□ -0.36
LITAF-220ENST00000620789 RNASE3P12724 160 aaKnown RBP12.81□□□□□ -0.36
LITAF-220ENST00000620789 TEX261Q6UWH6 196 aa12.81□□□□□ -0.36
LITAF-220ENST00000620789 VPS13DQ5THJ4 4388 aa12.81□□□□□ -0.36
LITAF-220ENST00000620789 TRAV26-1A0A087WT03 109 aa12.8□□□□□ -0.36
LITAF-220ENST00000620789 RBFOX3A6NFN3 312 aa12.8□□□□□ -0.36
LITAF-220ENST00000620789 IGHV3-53P01767 116 aa12.8□□□□□ -0.36
LITAF-220ENST00000620789 P0DMU3 169 aa12.8□□□□□ -0.36
LITAF-220ENST00000620789 FAM231AP0DMU4 169 aa12.8□□□□□ -0.36
LITAF-220ENST00000620789 FAM231CP0DMU5 169 aa12.8□□□□□ -0.36
LITAF-220ENST00000620789 S100A4P26447 101 aaKnown RBP12.8□□□□□ -0.36
LITAF-220ENST00000620789 ASIPP42127 132 aa12.8□□□□□ -0.36
LITAF-220ENST00000620789 LINC01559Q495D7 138 aa12.8□□□□□ -0.36
LITAF-220ENST00000620789 CENPWQ5EE01 88 aa12.8□□□□□ -0.36
LITAF-220ENST00000620789 ZNF506Q5JVG8 444 aa12.79□□□□□ -0.36
LITAF-220ENST00000620789 DNLZQ5SXM8 178 aa12.79□□□□□ -0.36
LITAF-220ENST00000620789 MUC4Q99102 2169 aa12.79□□□□□ -0.36
LITAF-220ENST00000620789 A0A0J9YY99 117 aa12.78□□□□□ -0.36
LITAF-220ENST00000620789 RAB19A4D1S5 217 aa12.78□□□□□ -0.36
LITAF-220ENST00000620789 H3BNG1 76 aa12.78□□□□□ -0.36
LITAF-220ENST00000620789 NUDT3O95989 172 aa12.78□□□□□ -0.36
LITAF-220ENST00000620789 GNG4P50150 75 aa12.78□□□□□ -0.36
LITAF-220ENST00000620789 ZNF876PQ49A33 203 aa12.78□□□□□ -0.36
LITAF-220ENST00000620789 PRR27Q6MZM9 219 aa12.78□□□□□ -0.36
LITAF-220ENST00000620789 POM121L12Q8N7R1 296 aa12.78□□□□□ -0.36
LITAF-220ENST00000620789 PTH2Q96A98 100 aa12.78□□□□□ -0.36
LITAF-220ENST00000620789 SMIM12Q96EX1 92 aa12.78□□□□□ -0.36
LITAF-220ENST00000620789 TMSB15BA0A087X1C1 80 aa12.77□□□□□ -0.37
LITAF-220ENST00000620789 TRAV4A0A0B4J268 109 aa12.77□□□□□ -0.37
LITAF-220ENST00000620789 C9JCJ5 164 aa12.77□□□□□ -0.37
LITAF-220ENST00000620789 IGLV2-8P01709 118 aa12.77□□□□□ -0.37
LITAF-220ENST00000620789 SFTA3P0C7M3 94 aa12.77□□□□□ -0.37
LITAF-220ENST00000620789 FHL2Q14192 279 aa12.77□□□□□ -0.37
LITAF-220ENST00000620789 TOR2AQ5JU69 321 aa12.77□□□□□ -0.37
LITAF-220ENST00000620789 ZNF575Q86XF7 245 aa12.77□□□□□ -0.37
LITAF-220ENST00000620789 ZNF479Q96JC4 524 aa12.77□□□□□ -0.37
LITAF-220ENST00000620789 IL36BQ9NZH7 164 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms