RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 G3V318 75 aa14.92□□□□□ -0.02
PDLIM3-212ENST00000620787 SCGB1A1P11684 91 aa14.92□□□□□ -0.02
PDLIM3-212ENST00000620787 OR11H1Q8NG94 326 aa14.92□□□□□ -0.02
PDLIM3-212ENST00000620787 OR11H2Q8NH07 326 aa14.92□□□□□ -0.02
PDLIM3-212ENST00000620787 TOMM6Q96B49 74 aa14.92□□□□□ -0.02
PDLIM3-212ENST00000620787 AJUBAQ96IF1 538 aa14.92□□□□□ -0.02
PDLIM3-212ENST00000620787 SIRPDQ9H106 197 aa14.92□□□□□ -0.02
PDLIM3-212ENST00000620787 ETDBQ3ZM63 59 aa14.92□□□□□ -0.02
PDLIM3-212ENST00000620787 NEXN-AS1Q8NBZ9 246 aa14.92□□□□□ -0.02
PDLIM3-212ENST00000620787 KLK15Q9H2R5 256 aa14.92□□□□□ -0.02
PDLIM3-212ENST00000620787 LINC01548A6NM66 108 aa14.91□□□□□ -0.02
PDLIM3-212ENST00000620787 ORMDL2Q53FV1 153 aa14.91□□□□□ -0.02
PDLIM3-212ENST00000620787 RASL10AQ92737 203 aa14.91□□□□□ -0.02
PDLIM3-212ENST00000620787 EEF1AKMT3Q96AZ1 226 aa14.91□□□□□ -0.02
PDLIM3-212ENST00000620787 SCGB3A1Q96QR1 104 aa14.91□□□□□ -0.02
PDLIM3-212ENST00000620787 SPAG8Q99932 426 aaPredicted RBP14.91□□□□□ -0.02
PDLIM3-212ENST00000620787 IGF1P05019 195 aa14.91□□□□□ -0.02
PDLIM3-212ENST00000620787 SLC25A16P16260 332 aa14.91□□□□□ -0.02
PDLIM3-212ENST00000620787 J3QR89 54 aa14.9□□□□□ -0.02
PDLIM3-212ENST00000620787 SUMO2P61956 95 aaKnown RBP14.9□□□□□ -0.02
PDLIM3-212ENST00000620787 SMAGPQ0VAQ4 97 aa14.9□□□□□ -0.02
PDLIM3-212ENST00000620787 CDSNQ15517 529 aa14.9□□□□□ -0.02
PDLIM3-212ENST00000620787 GAGE13Q4V321 117 aa14.9□□□□□ -0.02
PDLIM3-212ENST00000620787 MTURNQ8N3F0 131 aa14.9□□□□□ -0.02
PDLIM3-212ENST00000620787 SPATA25Q9BR10 227 aa14.9□□□□□ -0.02
PDLIM3-212ENST00000620787 TLN1Q9Y490 2541 aaKnown RBP14.9□□□□□ -0.02
PDLIM3-212ENST00000620787 LGALS1P09382 135 aaKnown RBP14.9□□□□□ -0.02
PDLIM3-212ENST00000620787 MORN3Q6PF18 240 aaPredicted RBP14.9□□□□□ -0.02
PDLIM3-212ENST00000620787 C20orf173Q96LM9 149 aa14.9□□□□□ -0.02
PDLIM3-212ENST00000620787 CIDEAO60543 219 aa14.89□□□□□ -0.03
PDLIM3-212ENST00000620787 RIF1Q5UIP0 2472 aaKnown RBP14.89□□□□□ -0.03
PDLIM3-212ENST00000620787 ZFHX2Q9C0A1 2572 aaPredicted RBP14.89□□□□□ -0.03
PDLIM3-212ENST00000620787 TRBV7-1A0A0A6YYK4 115 aa14.89□□□□□ -0.03
PDLIM3-212ENST00000620787 RNF223E7ERA6 249 aa14.89□□□□□ -0.03
PDLIM3-212ENST00000620787 SPRY2O43597 315 aa14.89□□□□□ -0.03
PDLIM3-212ENST00000620787 RPL39LQ96EH5 51 aaKnown RBP14.89□□□□□ -0.03
PDLIM3-212ENST00000620787 C16orf92Q96LL3 132 aa14.89□□□□□ -0.03
PDLIM3-212ENST00000620787 CYSLTR1Q9Y271 337 aa14.89□□□□□ -0.03
PDLIM3-212ENST00000620787 CACNA1BQ00975 2339 aa14.88□□□□□ -0.03
PDLIM3-212ENST00000620787 ITLN2Q8WWU7 325 aaPredicted RBP14.88□□□□□ -0.03
PDLIM3-212ENST00000620787 C20orf78Q9BR46 151 aa14.88□□□□□ -0.03
PDLIM3-212ENST00000620787 CENPVL3A0A0U1RRI6 287 aa14.88□□□□□ -0.03
PDLIM3-212ENST00000620787 TCF15Q12870 199 aa14.88□□□□□ -0.03
PDLIM3-212ENST00000620787 BAALCQ8WXS3 180 aa14.88□□□□□ -0.03
PDLIM3-212ENST00000620787 LENEPQ9Y5L5 61 aa14.88□□□□□ -0.03
PDLIM3-212ENST00000620787 M0R381 172 aa14.87□□□□□ -0.03
PDLIM3-212ENST00000620787 RAXQ9Y2V3 346 aa14.87□□□□□ -0.03
PDLIM3-212ENST00000620787 J3KRW8 73 aa14.87□□□□□ -0.03
PDLIM3-212ENST00000620787 ZFAND2AQ8N6M9 145 aa14.87□□□□□ -0.03
PDLIM3-212ENST00000620787 GLMPQ8WWB7 406 aa14.87□□□□□ -0.03
PDLIM3-212ENST00000620787 DPH3P1Q9H4G8 78 aa14.87□□□□□ -0.03
PDLIM3-212ENST00000620787 C9orf139Q6ZV77 190 aa14.86□□□□□ -0.03
PDLIM3-212ENST00000620787 PRADC1Q9BSG0 188 aa14.86□□□□□ -0.03
PDLIM3-212ENST00000620787 HOXA3O43365 443 aaPredicted RBP14.85□□□□□ -0.03
PDLIM3-212ENST00000620787 INSL3P51460 131 aa14.85□□□□□ -0.03
PDLIM3-212ENST00000620787 UBE2E1P51965 193 aa14.85□□□□□ -0.03
PDLIM3-212ENST00000620787 C2orf66Q6UXQ4 117 aa14.85□□□□□ -0.03
PDLIM3-212ENST00000620787 LCNL1Q6ZST4 164 aa14.85□□□□□ -0.03
PDLIM3-212ENST00000620787 C14orf178Q8N769 122 aaPredicted RBP14.85□□□□□ -0.03
PDLIM3-212ENST00000620787 CCL21O00585 134 aa14.84□□□□□ -0.03
PDLIM3-212ENST00000620787 SAA4P35542 130 aa14.84□□□□□ -0.03
PDLIM3-212ENST00000620787 PGPEP1Q9NXJ5 209 aa14.84□□□□□ -0.03
PDLIM3-212ENST00000620787 PRSS29PA6NIE9 313 aa14.84□□□□□ -0.03
PDLIM3-212ENST00000620787 RELNP78509 3460 aa14.84□□□□□ -0.03
PDLIM3-212ENST00000620787 MED13LQ71F56 2210 aa14.84□□□□□ -0.03
PDLIM3-212ENST00000620787 SVEP1Q4LDE5 3571 aa14.83□□□□□ -0.03
PDLIM3-212ENST00000620787 ATP5G2Q06055 141 aa14.83□□□□□ -0.03
PDLIM3-212ENST00000620787 GPHB5Q86YW7 130 aa14.83□□□□□ -0.03
PDLIM3-212ENST00000620787 TRAV21A0A0B4J279 112 aa14.83□□□□□ -0.04
PDLIM3-212ENST00000620787 COX6B1P14854 86 aa14.83□□□□□ -0.04
PDLIM3-212ENST00000620787 LINC00477Q96M19 166 aa14.83□□□□□ -0.04
PDLIM3-212ENST00000620787 SPOCK3Q9BQ16 436 aa14.83□□□□□ -0.04
PDLIM3-212ENST00000620787 ZNF815PA8K554 130 aa14.82□□□□□ -0.04
PDLIM3-212ENST00000620787 ASIPP42127 132 aa14.82□□□□□ -0.04
PDLIM3-212ENST00000620787 PLEKHB2Q96CS7 222 aa14.82□□□□□ -0.04
PDLIM3-212ENST00000620787 MGPP08493 103 aa14.82□□□□□ -0.04
PDLIM3-212ENST00000620787 S100A4P26447 101 aaKnown RBP14.82□□□□□ -0.04
PDLIM3-212ENST00000620787 C5orf56Q8N8D9 126 aa14.82□□□□□ -0.04
PDLIM3-212ENST00000620787 PHLDA3Q9Y5J5 127 aa14.82□□□□□ -0.04
PDLIM3-212ENST00000620787 K7ENP7 123 aa14.81□□□□□ -0.04
PDLIM3-212ENST00000620787 ADORA2A-AS1P86434 159 aa14.81□□□□□ -0.04
PDLIM3-212ENST00000620787 ANXA2RQ3ZCQ2 193 aa14.81□□□□□ -0.04
PDLIM3-212ENST00000620787 MRPL16Q9NX20 251 aaKnown RBP14.81□□□□□ -0.04
PDLIM3-212ENST00000620787 NDUFS8O00217 210 aa14.81□□□□□ -0.04
PDLIM3-212ENST00000620787 UBE2D1P51668 147 aa14.81□□□□□ -0.04
PDLIM3-212ENST00000620787 DEFB1P60022 68 aa14.81□□□□□ -0.04
PDLIM3-212ENST00000620787 SCGB2A2Q13296 93 aa14.81□□□□□ -0.04
PDLIM3-212ENST00000620787 SPTBN2O15020 2390 aa14.8□□□□□ -0.04
PDLIM3-212ENST00000620787 OR10J6PQ8NGY7 276 aa14.8□□□□□ -0.04
PDLIM3-212ENST00000620787 SOCS3O14543 225 aa14.8□□□□□ -0.04
PDLIM3-212ENST00000620787 MED14OSP0DP75 135 aa14.8□□□□□ -0.04
PDLIM3-212ENST00000620787 SMCPP49901 116 aaPredicted RBP14.8□□□□□ -0.04
PDLIM3-212ENST00000620787 CFAP126Q5VTH2 177 aa14.8□□□□□ -0.04
PDLIM3-212ENST00000620787 ASH1LQ9NR48 2969 aaKnown RBP14.79□□□□□ -0.04
PDLIM3-212ENST00000620787 TMEM238LA0A1B0GVL6 79 aa14.79□□□□□ -0.04
PDLIM3-212ENST00000620787 LINC01549A6NIU2 74 aa14.79□□□□□ -0.04
PDLIM3-212ENST00000620787 A6NJY4 79 aa14.79□□□□□ -0.04
PDLIM3-212ENST00000620787 CLEC2AQ6UVW9 174 aa14.79□□□□□ -0.04
PDLIM3-212ENST00000620787 OVOL1O14753 267 aa14.78□□□□□ -0.04
PDLIM3-212ENST00000620787 APOMO95445 188 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms