RNA–Protein interactions for RNA: ENST00000620529.1

PCGF3-213, Transcript of polycomb group ring finger 3, humanhuman

BASIC

Gene PCGF3, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-213ENST00000620529 FAM110AQ9BQ89 295 aa12.26□□□□□ -0.45
PCGF3-213ENST00000620529 TRAV12-2A0A075B6T6 113 aa12.25□□□□□ -0.45
PCGF3-213ENST00000620529 TRAV12-3A0A0B4J271 114 aa12.25□□□□□ -0.45
PCGF3-213ENST00000620529 FRMD6-AS1P0C7T7 363 aa12.25□□□□□ -0.45
PCGF3-213ENST00000620529 GFI1BQ5VTD9 330 aa12.25□□□□□ -0.45
PCGF3-213ENST00000620529 MRPL18Q9H0U6 180 aaKnown RBP12.25□□□□□ -0.45
PCGF3-213ENST00000620529 A0A1B0GXF2 115 aa12.25□□□□□ -0.45
PCGF3-213ENST00000620529 S100A8P05109 93 aa12.25□□□□□ -0.45
PCGF3-213ENST00000620529 ARMS2P0C7Q2 107 aa12.25□□□□□ -0.45
PCGF3-213ENST00000620529 IGLC6P0CF74 106 aa12.25□□□□□ -0.45
PCGF3-213ENST00000620529 MUC21Q5SSG8 566 aa12.25□□□□□ -0.45
PCGF3-213ENST00000620529 SHISA2Q6UWI4 295 aa12.25□□□□□ -0.45
PCGF3-213ENST00000620529 FAM159AQ6UWV7 190 aa12.25□□□□□ -0.45
PCGF3-213ENST00000620529 TMEM136Q6ZRR5 245 aa12.25□□□□□ -0.45
PCGF3-213ENST00000620529 TENM1Q9UKZ4 2725 aa12.24□□□□□ -0.45
PCGF3-213ENST00000620529 A0A1B0GW15 77 aa12.24□□□□□ -0.45
PCGF3-213ENST00000620529 S100A6P06703 90 aa12.24□□□□□ -0.45
PCGF3-213ENST00000620529 CD7P09564 240 aa12.24□□□□□ -0.45
PCGF3-213ENST00000620529 CTRLP40313 264 aa12.24□□□□□ -0.45
PCGF3-213ENST00000620529 FXYD7P58549 80 aa12.24□□□□□ -0.45
PCGF3-213ENST00000620529 ANXA2RQ3ZCQ2 193 aa12.24□□□□□ -0.45
PCGF3-213ENST00000620529 F2Z2F3 143 aa12.23□□□□□ -0.45
PCGF3-213ENST00000620529 TRGC1P0CF51 173 aa12.23□□□□□ -0.45
PCGF3-213ENST00000620529 S100A4P26447 101 aaKnown RBP12.23□□□□□ -0.45
PCGF3-213ENST00000620529 KCNS1Q96KK3 526 aa12.23□□□□□ -0.45
PCGF3-213ENST00000620529 CLUHP3Q96NS8 147 aa12.23□□□□□ -0.45
PCGF3-213ENST00000620529 ASIPP42127 132 aa12.23□□□□□ -0.45
PCGF3-213ENST00000620529 RBMY1BA6NDE4 496 aaKnown RBP12.22□□□□□ -0.45
PCGF3-213ENST00000620529 RBMY1EA6NEQ0 496 aaKnown RBP12.22□□□□□ -0.45
PCGF3-213ENST00000620529 PHOX2AO14813 284 aa12.22□□□□□ -0.45
PCGF3-213ENST00000620529 HIST1H2BKO60814 126 aa12.22□□□□□ -0.45
PCGF3-213ENST00000620529 ZNF324O75467 553 aaPredicted RBP12.22□□□□□ -0.45
PCGF3-213ENST00000620529 HIST1H2BJP06899 126 aa12.22□□□□□ -0.45
PCGF3-213ENST00000620529 RBMY1DP0C7P1 496 aaKnown RBP12.22□□□□□ -0.45
PCGF3-213ENST00000620529 HIST1H2BOP23527 126 aa12.22□□□□□ -0.45
PCGF3-213ENST00000620529 HIST1H2BBP33778 126 aa12.22□□□□□ -0.45
PCGF3-213ENST00000620529 HIST1H2BDP58876 126 aa12.22□□□□□ -0.45
PCGF3-213ENST00000620529 SSTP61278 116 aa12.22□□□□□ -0.45
PCGF3-213ENST00000620529 HIST1H2BCP62807 126 aa12.22□□□□□ -0.45
PCGF3-213ENST00000620529 HIST2H2BEQ16778 126 aa12.22□□□□□ -0.45
PCGF3-213ENST00000620529 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.22□□□□□ -0.45
PCGF3-213ENST00000620529 GTSCR1Q86UQ5 136 aa12.22□□□□□ -0.45
PCGF3-213ENST00000620529 ZNF575Q86XF7 245 aa12.22□□□□□ -0.45
PCGF3-213ENST00000620529 SPATA3Q8NHX4 192 aa12.22□□□□□ -0.45
PCGF3-213ENST00000620529 HIST1H2BHQ93079 126 aa12.22□□□□□ -0.45
PCGF3-213ENST00000620529 HIST1H2BNQ99877 126 aa12.22□□□□□ -0.45
PCGF3-213ENST00000620529 HIST1H2BMQ99879 126 aa12.22□□□□□ -0.45
PCGF3-213ENST00000620529 APCSP02743 223 aa12.21□□□□□ -0.45
PCGF3-213ENST00000620529 NUTF2P61970 127 aaKnown RBP12.21□□□□□ -0.45
PCGF3-213ENST00000620529 AMBPP02760 352 aa12.21□□□□□ -0.46
PCGF3-213ENST00000620529 TRPT1Q86TN4 253 aaKnown RBP12.21□□□□□ -0.46
PCGF3-213ENST00000620529 WFDC9Q8NEX5 89 aa12.21□□□□□ -0.46
PCGF3-213ENST00000620529 MUC21A0A0G2JKD1 596 aa12.2□□□□□ -0.46
PCGF3-213ENST00000620529 MUC21A0A140T8X8 626 aa12.2□□□□□ -0.46
PCGF3-213ENST00000620529 H3BVH4 76 aa12.2□□□□□ -0.46
PCGF3-213ENST00000620529 TWIST1Q15672 202 aa12.2□□□□□ -0.46
PCGF3-213ENST00000620529 SSBP4Q9BWG4 385 aaPredicted RBP12.2□□□□□ -0.46
PCGF3-213ENST00000620529 TIMM8BQ9Y5J9 83 aaPredicted RBP12.2□□□□□ -0.46
PCGF3-213ENST00000620529 OR5AL1P0C617 328 aa12.19□□□□□ -0.46
PCGF3-213ENST00000620529 NTF3P20783 257 aa12.19□□□□□ -0.46
PCGF3-213ENST00000620529 CNFNQ9BYD5 112 aa12.19□□□□□ -0.46
PCGF3-213ENST00000620529 IGHV1OR15-1A0A075B7D0 117 aa12.19□□□□□ -0.46
PCGF3-213ENST00000620529 CRXO43186 299 aaPredicted RBP12.19□□□□□ -0.46
PCGF3-213ENST00000620529 GNRH2O43555 120 aa12.19□□□□□ -0.46
PCGF3-213ENST00000620529 SNAI2O43623 268 aa12.19□□□□□ -0.46
PCGF3-213ENST00000620529 INSP01308 110 aa12.19□□□□□ -0.46
PCGF3-213ENST00000620529 MED14OSP0DP75 135 aa12.19□□□□□ -0.46
PCGF3-213ENST00000620529 IGLL1P15814 213 aa12.19□□□□□ -0.46
PCGF3-213ENST00000620529 TDRG1Q3Y452 100 aa12.19□□□□□ -0.46
PCGF3-213ENST00000620529 WFDC10AQ9H1F0 79 aa12.19□□□□□ -0.46
PCGF3-213ENST00000620529 C19orf73Q9NVV2 129 aa12.19□□□□□ -0.46
PCGF3-213ENST00000620529 NDUFA6P56556 154 aa12.18□□□□□ -0.46
PCGF3-213ENST00000620529 CACNG7P62955 275 aa12.18□□□□□ -0.46
PCGF3-213ENST00000620529 SLAQ13239 276 aa12.18□□□□□ -0.46
PCGF3-213ENST00000620529 DNLZQ5SXM8 178 aa12.18□□□□□ -0.46
PCGF3-213ENST00000620529 SPANXN1Q5VSR9 72 aa12.18□□□□□ -0.46
PCGF3-213ENST00000620529 KIAA1644Q3SXP7 199 aa12.17□□□□□ -0.46
PCGF3-213ENST00000620529 C20orf144Q9BQM9 153 aa12.17□□□□□ -0.46
PCGF3-213ENST00000620529 GATD1Q8NB37 220 aa12.17□□□□□ -0.46
PCGF3-213ENST00000620529 OR10AG1Q8NH19 301 aa12.17□□□□□ -0.46
PCGF3-213ENST00000620529 PHLDA3Q9Y5J5 127 aa12.17□□□□□ -0.46
PCGF3-213ENST00000620529 TRGV11A0A075B6L2 103 aa12.16□□□□□ -0.46
PCGF3-213ENST00000620529 ZNF493Q6ZR52 646 aa12.16□□□□□ -0.46
PCGF3-213ENST00000620529 NOTCH3Q9UM47 2321 aa12.16□□□□□ -0.46
PCGF3-213ENST00000620529 FBN1P35555 2871 aaKnown RBP12.15□□□□□ -0.46
PCGF3-213ENST00000620529 CBY3A6NI87 242 aa12.15□□□□□ -0.46
PCGF3-213ENST00000620529 SNRPEP62304 92 aaKnown RBP12.15□□□□□ -0.46
PCGF3-213ENST00000620529 SMIM15Q7Z3B0 74 aa12.15□□□□□ -0.46
PCGF3-213ENST00000620529 XCL2Q9UBD3 114 aa12.15□□□□□ -0.46
PCGF3-213ENST00000620529 RBMY1A1P0DJD3 496 aaKnown RBP12.14□□□□□ -0.47
PCGF3-213ENST00000620529 RBMY1CP0DJD4 496 aa12.14□□□□□ -0.47
PCGF3-213ENST00000620529 RNASE3P12724 160 aaKnown RBP12.14□□□□□ -0.47
PCGF3-213ENST00000620529 RBMY1FQ15415 496 aaKnown RBP12.14□□□□□ -0.47
PCGF3-213ENST00000620529 Q8N1Y9 231 aa12.14□□□□□ -0.47
PCGF3-213ENST00000620529 DEFB125Q8N687 156 aa12.14□□□□□ -0.47
PCGF3-213ENST00000620529 WIPF1O43516 503 aa12.14□□□□□ -0.47
PCGF3-213ENST00000620529 HTN1P15515 57 aa12.14□□□□□ -0.47
PCGF3-213ENST00000620529 RPL35AP18077 110 aaKnown RBP12.14□□□□□ -0.47
PCGF3-213ENST00000620529 SRIP30626 198 aa12.14□□□□□ -0.47
PCGF3-213ENST00000620529 PRR31Q5SQ13 230 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms