RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 IGKCP01834 107 aa7.12□□□□□ -1.27
RBFOX1-223ENST00000620507 HERVK_113P61574 105 aa7.12□□□□□ -1.27
RBFOX1-223ENST00000620507 OR11H12B2RN74 326 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 ZNF80P51504 273 aaPredicted RBP7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 SRSF9Q13242 221 aaKnown RBP eCLIP7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 FOXE3Q13461 319 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 ORMDL2Q53FV1 153 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 LINC01356Q8N9X3 169 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 OR11H1Q8NG94 326 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 OR11H2Q8NH07 326 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 MRPL53Q96EL3 112 aaKnown RBP7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 PRORYQ9H606 182 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 LINC01559Q495D7 138 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 SMIM20Q8N5G0 67 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 DPH3P1Q9H4G8 78 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 NAV2Q8IVL1 2488 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 MUC3AQ02505 3323 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 TRAV26-2A0A0B4J265 109 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 CTRLP40313 264 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 LGALS9BQ3B8N2 356 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 LGALS9CQ6DKI2 356 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 OR9G4Q8NGQ1 327 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 DUX5Q96PT3 197 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 HIST1H4GQ99525 98 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 SMPXQ9UHP9 88 aa7.11□□□□□ -1.27
RBFOX1-223ENST00000620507 ZNF493Q6ZR52 646 aa7.1□□□□□ -1.27
RBFOX1-223ENST00000620507 TRAV12-3A0A0B4J271 114 aa7.1□□□□□ -1.27
RBFOX1-223ENST00000620507 TMEM8BA6NDV4 472 aa7.1□□□□□ -1.27
RBFOX1-223ENST00000620507 H3BUA1 57 aa7.1□□□□□ -1.27
RBFOX1-223ENST00000620507 SEC11AP67812 179 aa7.1□□□□□ -1.27
RBFOX1-223ENST00000620507 SMAD5-AS1Q9Y6J3 95 aa7.1□□□□□ -1.27
RBFOX1-223ENST00000620507 LOC400499M0QZD8 3231 aa7.1□□□□□ -1.27
RBFOX1-223ENST00000620507 F6UB75 175 aa7.1□□□□□ -1.27
RBFOX1-223ENST00000620507 AZU1P20160 251 aa7.1□□□□□ -1.27
RBFOX1-223ENST00000620507 ZC2HC1BQ5TFG8 222 aa7.1□□□□□ -1.27
RBFOX1-223ENST00000620507 LINC01545Q5VT33 79 aa7.1□□□□□ -1.27
RBFOX1-223ENST00000620507 GTSCR1Q86UQ5 136 aa7.1□□□□□ -1.27
RBFOX1-223ENST00000620507 Q8N8P6 123 aa7.1□□□□□ -1.27
RBFOX1-223ENST00000620507 COX8AP10176 69 aa7.09□□□□□ -1.27
RBFOX1-223ENST00000620507 FABP2P12104 132 aa7.09□□□□□ -1.27
RBFOX1-223ENST00000620507 GATA1P15976 413 aaPredicted RBP7.09□□□□□ -1.27
RBFOX1-223ENST00000620507 ZFAND3Q9H8U3 227 aa7.09□□□□□ -1.27
RBFOX1-223ENST00000620507 IGHV7-4-1A0A0J9YVY3 117 aa7.09□□□□□ -1.27
RBFOX1-223ENST00000620507 RNF223E7ERA6 249 aa7.09□□□□□ -1.27
RBFOX1-223ENST00000620507 MRPS12O15235 138 aaKnown RBP7.09□□□□□ -1.27
RBFOX1-223ENST00000620507 HSD52Q0P140 79 aa7.09□□□□□ -1.27
RBFOX1-223ENST00000620507 ANXA2RQ3ZCQ2 193 aa7.09□□□□□ -1.27
RBFOX1-223ENST00000620507 LENEPQ9Y5L5 61 aa7.09□□□□□ -1.27
RBFOX1-223ENST00000620507 MYO9AB2RTY4 2548 aa7.09□□□□□ -1.27
RBFOX1-223ENST00000620507 USP9XQ93008 2570 aaPredicted RBP7.09□□□□□ -1.28
RBFOX1-223ENST00000620507 SMIM13P0DJ93 91 aa7.09□□□□□ -1.28
RBFOX1-223ENST00000620507 SYNJ2BPP57105 145 aa7.09□□□□□ -1.28
RBFOX1-223ENST00000620507 UNQ9165/PRO28630Q6UXU0 137 aa7.09□□□□□ -1.28
RBFOX1-223ENST00000620507 Q71RC1 249 aaPredicted RBP7.09□□□□□ -1.28
RBFOX1-223ENST00000620507 ZNF256Q9Y2P7 627 aaPredicted RBP7.09□□□□□ -1.28
RBFOX1-223ENST00000620507 IGHV4-59P01825 116 aa7.08□□□□□ -1.28
RBFOX1-223ENST00000620507 NRGNQ92686 78 aa7.08□□□□□ -1.28
RBFOX1-223ENST00000620507 MRAP2Q96G30 205 aa7.08□□□□□ -1.28
RBFOX1-223ENST00000620507 ANAPC13Q9BS18 74 aa7.08□□□□□ -1.28
RBFOX1-223ENST00000620507 PTPN13Q12923 2485 aa7.08□□□□□ -1.28
RBFOX1-223ENST00000620507 WDFY3Q8IZQ1 3526 aa7.08□□□□□ -1.28
RBFOX1-223ENST00000620507 F8W735 103 aaPredicted RBP7.08□□□□□ -1.28
RBFOX1-223ENST00000620507 H3BUT2 72 aa7.08□□□□□ -1.28
RBFOX1-223ENST00000620507 SMAD7O15105 426 aaKnown RBP7.08□□□□□ -1.28
RBFOX1-223ENST00000620507 SAP30O75446 220 aa7.08□□□□□ -1.28
RBFOX1-223ENST00000620507 TRBV12-3P01733 135 aa7.08□□□□□ -1.28
RBFOX1-223ENST00000620507 IGHG2P01859 326 aa7.08□□□□□ -1.28
RBFOX1-223ENST00000620507 DUSP14O95147 198 aaKnown RBP7.08□□□□□ -1.28
RBFOX1-223ENST00000620507 C9orf47Q6ZRZ4 202 aa7.08□□□□□ -1.28
RBFOX1-223ENST00000620507 CYSLTR1Q9Y271 337 aa7.08□□□□□ -1.28
RBFOX1-223ENST00000620507 SUMO2P61956 95 aaKnown RBP7.07□□□□□ -1.28
RBFOX1-223ENST00000620507 LOXL1Q08397 574 aaPredicted RBP7.07□□□□□ -1.28
RBFOX1-223ENST00000620507 DEFB112Q30KQ8 113 aa7.07□□□□□ -1.28
RBFOX1-223ENST00000620507 DEFB104AQ8WTQ1 72 aa7.07□□□□□ -1.28
RBFOX1-223ENST00000620507 AJUBAQ96IF1 538 aa7.07□□□□□ -1.28
RBFOX1-223ENST00000620507 YAE1D1Q9NRH1 226 aa7.07□□□□□ -1.28
RBFOX1-223ENST00000620507 SORL1Q92673 2214 aa7.07□□□□□ -1.28
RBFOX1-223ENST00000620507 CCDC168Q8NDH2 2452 aa7.07□□□□□ -1.28
RBFOX1-223ENST00000620507 K7EP13 123 aa7.07□□□□□ -1.28
RBFOX1-223ENST00000620507 SPRY2O43597 315 aa7.07□□□□□ -1.28
RBFOX1-223ENST00000620507 CD5LO43866 347 aa7.07□□□□□ -1.28
RBFOX1-223ENST00000620507 IGLC6P0CF74 106 aa7.07□□□□□ -1.28
RBFOX1-223ENST00000620507 DKK2Q9UBU2 259 aa7.07□□□□□ -1.28
RBFOX1-223ENST00000620507 Q8N976 141 aa7.07□□□□□ -1.28
RBFOX1-223ENST00000620507 TMEM170BQ5T4T1 132 aa7.06□□□□□ -1.28
RBFOX1-223ENST00000620507 DGAT2L7PQ6IED9 249 aa7.06□□□□□ -1.28
RBFOX1-223ENST00000620507 RAX2Q96IS3 184 aa7.06□□□□□ -1.28
RBFOX1-223ENST00000620507 A0A087WWL8 130 aa7.06□□□□□ -1.28
RBFOX1-223ENST00000620507 DEFB1P60022 68 aa7.06□□□□□ -1.28
RBFOX1-223ENST00000620507 BVES-AS1Q5T3Y7 98 aa7.06□□□□□ -1.28
RBFOX1-223ENST00000620507 NAA38Q9BRA0 125 aaKnown RBP7.06□□□□□ -1.28
RBFOX1-223ENST00000620507 BEX4Q9NWD9 120 aaPredicted RBP7.06□□□□□ -1.28
RBFOX1-223ENST00000620507 PKD1L2Q7Z442 2459 aa7.06□□□□□ -1.28
RBFOX1-223ENST00000620507 IGKV3D-20A0A0C4DH25 116 aa7.06□□□□□ -1.28
RBFOX1-223ENST00000620507 CRXO43186 299 aaPredicted RBP7.06□□□□□ -1.28
RBFOX1-223ENST00000620507 URB1-AS1Q96HZ7 61 aa7.06□□□□□ -1.28
RBFOX1-223ENST00000620507 IGHV3OR16-12A0A075B7B8 117 aa7.05□□□□□ -1.28
RBFOX1-223ENST00000620507 GNRH2O43555 120 aa7.05□□□□□ -1.28
RBFOX1-223ENST00000620507 PLNP26678 52 aa7.05□□□□□ -1.28
RBFOX1-223ENST00000620507 SRSF2Q01130 221 aaKnown RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms