RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 RNF212Q495C1 297 aa5.86□□□□□ -1.47
CPNE3-209ENST00000620393 IBA57Q5T440 356 aaKnown RBP5.86□□□□□ -1.47
CPNE3-209ENST00000620393 Q6ZQT7 251 aa5.86□□□□□ -1.47
CPNE3-209ENST00000620393 C15orf54Q8N8G6 183 aa5.86□□□□□ -1.47
CPNE3-209ENST00000620393 ANAPC16Q96DE5 110 aa5.86□□□□□ -1.47
CPNE3-209ENST00000620393 C20orf144Q9BQM9 153 aa5.86□□□□□ -1.47
CPNE3-209ENST00000620393 C1QTNF4Q9BXJ3 329 aa5.86□□□□□ -1.47
CPNE3-209ENST00000620393 KRTAP4-2Q9BYR5 136 aa5.86□□□□□ -1.47
CPNE3-209ENST00000620393 CTDSP1Q9GZU7 261 aa5.86□□□□□ -1.47
CPNE3-209ENST00000620393 C11orf21Q9P2W6 132 aa5.86□□□□□ -1.47
CPNE3-209ENST00000620393 PKD1L1Q8TDX9 2849 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 A0A087WWC5 75 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 IGKV3D-20A0A0C4DH25 116 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 TMEM189A5PLL7 270 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 ZNF705GA8MUZ8 300 aaPredicted RBP5.85□□□□□ -1.47
CPNE3-209ENST00000620393 INSP01308 110 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 ORM1P02763 201 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 APOC4P55056 127 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 RHEBQ15382 184 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 ANXA2RQ3ZCQ2 193 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 ATRAIDQ6UW56 229 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 ZNF575Q86XF7 245 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 C1orf158Q8N1D5 194 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 CSNK1G2-AS1Q8NCQ2 148 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 OR2D3Q8NGH3 330 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 LINC01587Q99440 93 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 RPS10P5Q9NQ39 176 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 TMEM242Q9NWH2 141 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 V9GYV3 84 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 MGAM2Q2M2H8 2515 aa5.85□□□□□ -1.47
CPNE3-209ENST00000620393 IGHV1OR15-1A0A075B7D0 117 aa5.84□□□□□ -1.47
CPNE3-209ENST00000620393 H7BYZ3 331 aa5.84□□□□□ -1.47
CPNE3-209ENST00000620393 K7EIL1 84 aa5.84□□□□□ -1.47
CPNE3-209ENST00000620393 EREGO14944 169 aa5.84□□□□□ -1.47
CPNE3-209ENST00000620393 CA1P00915 261 aaPredicted RBP5.84□□□□□ -1.47
CPNE3-209ENST00000620393 PRB2P02812 416 aaPredicted RBP5.84□□□□□ -1.47
CPNE3-209ENST00000620393 RBMY1A1P0DJD3 496 aaKnown RBP5.84□□□□□ -1.47
CPNE3-209ENST00000620393 RBMY1CP0DJD4 496 aa5.84□□□□□ -1.47
CPNE3-209ENST00000620393 RPS20P60866 119 aaKnown RBP5.84□□□□□ -1.47
CPNE3-209ENST00000620393 RBMY1FQ15415 496 aaKnown RBP5.84□□□□□ -1.47
CPNE3-209ENST00000620393 TDRG1Q3Y452 100 aa5.84□□□□□ -1.47
CPNE3-209ENST00000620393 CT83Q5H943 113 aa5.84□□□□□ -1.47
CPNE3-209ENST00000620393 FAM159AQ6UWV7 190 aa5.84□□□□□ -1.47
CPNE3-209ENST00000620393 TMEM256Q8N2U0 113 aa5.84□□□□□ -1.47
CPNE3-209ENST00000620393 KCNS1Q96KK3 526 aa5.84□□□□□ -1.47
CPNE3-209ENST00000620393 PYGO2Q9BRQ0 406 aa5.84□□□□□ -1.47
CPNE3-209ENST00000620393 LINC00467Q9BRT7 94 aa5.84□□□□□ -1.47
CPNE3-209ENST00000620393 KRTAP4-9Q9BYQ8 210 aa5.84□□□□□ -1.47
CPNE3-209ENST00000620393 RPP21Q9H633 154 aaKnown RBP5.84□□□□□ -1.47
CPNE3-209ENST00000620393 GOLT1BQ9Y3E0 138 aa5.84□□□□□ -1.47
CPNE3-209ENST00000620393 DNAH3Q8TD57 4116 aa5.84□□□□□ -1.47
CPNE3-209ENST00000620393 AGRNO00468 2067 aa5.84□□□□□ -1.47
CPNE3-209ENST00000620393 TMSB15BA0A087X1C1 80 aa5.83□□□□□ -1.48
CPNE3-209ENST00000620393 XKRY2A2RUG3 117 aa5.83□□□□□ -1.48
CPNE3-209ENST00000620393 A8MWL6 223 aa5.83□□□□□ -1.48
CPNE3-209ENST00000620393 GNRH2O43555 120 aa5.83□□□□□ -1.48
CPNE3-209ENST00000620393 EIF4EBP3O60516 100 aaPredicted RBP5.83□□□□□ -1.48
CPNE3-209ENST00000620393 CXCL1P09341 107 aa5.83□□□□□ -1.48
CPNE3-209ENST00000620393 FRMD6-AS1P0C7T7 363 aa5.83□□□□□ -1.48
CPNE3-209ENST00000620393 FOXA3P55318 350 aaPredicted RBP5.83□□□□□ -1.48
CPNE3-209ENST00000620393 RPL19P84098 196 aaKnown RBP5.83□□□□□ -1.48
CPNE3-209ENST00000620393 DEFB121Q5J5C9 76 aa5.83□□□□□ -1.48
CPNE3-209ENST00000620393 MUC21Q5SSG8 566 aa5.83□□□□□ -1.48
CPNE3-209ENST00000620393 ZNF705AQ6ZN79 300 aaPredicted RBP5.83□□□□□ -1.48
CPNE3-209ENST00000620393 Q6ZWC4 215 aa5.83□□□□□ -1.48
CPNE3-209ENST00000620393 TSKUQ8WUA8 353 aa5.83□□□□□ -1.48
CPNE3-209ENST00000620393 IMMP2LQ96T52 175 aa5.83□□□□□ -1.48
CPNE3-209ENST00000620393 TMEM208Q9BTX3 173 aa5.83□□□□□ -1.48
CPNE3-209ENST00000620393 IL36BQ9NZH7 164 aa5.83□□□□□ -1.48
CPNE3-209ENST00000620393 NAGKQ9UJ70 344 aa5.83□□□□□ -1.48
CPNE3-209ENST00000620393 SMIM27A0A1W2PRY6 76 aa5.82□□□□□ -1.48
CPNE3-209ENST00000620393 GRIFINA4D1Z8 144 aa5.82□□□□□ -1.48
CPNE3-209ENST00000620393 FAM231BA6NCW3 169 aa5.82□□□□□ -1.48
CPNE3-209ENST00000620393 CXorf65A6NEN9 183 aa5.82□□□□□ -1.48
CPNE3-209ENST00000620393 DNLZQ5SXM8 178 aa5.82□□□□□ -1.48
CPNE3-209ENST00000620393 GFRA4Q9GZZ7 299 aa5.82□□□□□ -1.48
CPNE3-209ENST00000620393 TRGV11A0A075B6L2 103 aa5.81□□□□□ -1.48
CPNE3-209ENST00000620393 IGHV3OR16-12A0A075B7B8 117 aa5.81□□□□□ -1.48
CPNE3-209ENST00000620393 IGHV3-16A0A0C4DH30 117 aa5.81□□□□□ -1.48
CPNE3-209ENST00000620393 A0A1W2PPQ1 181 aa5.81□□□□□ -1.48
CPNE3-209ENST00000620393 SMIM9A6NGZ8 99 aa5.81□□□□□ -1.48
CPNE3-209ENST00000620393 CBY3A6NI87 242 aa5.81□□□□□ -1.48
CPNE3-209ENST00000620393 PRM2P04554 102 aa5.81□□□□□ -1.48
CPNE3-209ENST00000620393 TYMSP04818 313 aa5.81□□□□□ -1.48
CPNE3-209ENST00000620393 IGLC6P0CF74 106 aa5.81□□□□□ -1.48
CPNE3-209ENST00000620393 GZMBP10144 247 aa5.81□□□□□ -1.48
CPNE3-209ENST00000620393 HTN1P15515 57 aa5.81□□□□□ -1.48
CPNE3-209ENST00000620393 GTSF1Q8WW33 167 aa5.81□□□□□ -1.48
CPNE3-209ENST00000620393 RNF183Q96D59 192 aa5.81□□□□□ -1.48
CPNE3-209ENST00000620393 RCHY1Q96PM5 261 aa5.81□□□□□ -1.48
CPNE3-209ENST00000620393 NEU1Q99519 415 aa5.81□□□□□ -1.48
CPNE3-209ENST00000620393 SMCO4Q9NRQ5 59 aa5.81□□□□□ -1.48
CPNE3-209ENST00000620393 TP53TG3Q9ULZ0 132 aa5.81□□□□□ -1.48
CPNE3-209ENST00000620393 F2Z2F3 143 aa5.8□□□□□ -1.48
CPNE3-209ENST00000620393 SPRY2O43597 315 aa5.8□□□□□ -1.48
CPNE3-209ENST00000620393 ARMS2P0C7Q2 107 aa5.8□□□□□ -1.48
CPNE3-209ENST00000620393 MED14OSP0DP75 135 aa5.8□□□□□ -1.48
CPNE3-209ENST00000620393 RNASE3P12724 160 aaKnown RBP5.8□□□□□ -1.48
CPNE3-209ENST00000620393 AZU1P20160 251 aa5.8□□□□□ -1.48
CPNE3-209ENST00000620393 S100A4P26447 101 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms