RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 LINC01619G3V211 115 aa15.17■□□□□ 0.02
MMP28-207ENST00000619655 KIR3DS1Q14943 382 aa15.17■□□□□ 0.02
MMP28-207ENST00000619655 MSRB1Q9NZV6 116 aa15.17■□□□□ 0.02
MMP28-207ENST00000619655 ZNF324O75467 553 aaPredicted RBP15.16■□□□□ 0.02
MMP28-207ENST00000619655 AMN1Q8IY45 258 aa15.16■□□□□ 0.02
MMP28-207ENST00000619655 ZFAND2AQ8N6M9 145 aa15.16■□□□□ 0.02
MMP28-207ENST00000619655 C4orf3Q8WVX3 66 aa15.16■□□□□ 0.02
MMP28-207ENST00000619655 HSBP1O75506 76 aa15.16■□□□□ 0.02
MMP28-207ENST00000619655 LENEPQ9Y5L5 61 aa15.16■□□□□ 0.02
MMP28-207ENST00000619655 OTOGQ6ZRI0 2925 aa15.15■□□□□ 0.02
MMP28-207ENST00000619655 A0A1W2PRX2 142 aa15.15■□□□□ 0.02
MMP28-207ENST00000619655 RNASE4P34096 147 aaKnown RBP15.15■□□□□ 0.02
MMP28-207ENST00000619655 NIT1Q86X76 327 aa15.15■□□□□ 0.02
MMP28-207ENST00000619655 CSN3P07498 182 aa15.15■□□□□ 0.02
MMP28-207ENST00000619655 OR1N2Q8NGR9 330 aa15.15■□□□□ 0.02
MMP28-207ENST00000619655 TIMM8BQ9Y5J9 83 aaPredicted RBP15.15■□□□□ 0.02
MMP28-207ENST00000619655 G0S2P27469 103 aa15.14■□□□□ 0.01
MMP28-207ENST00000619655 ZNF493Q6ZR52 646 aa15.14■□□□□ 0.01
MMP28-207ENST00000619655 IGKV3-20P01619 116 aa15.14■□□□□ 0.01
MMP28-207ENST00000619655 SNRPD3P62318 126 aaKnown RBP15.14■□□□□ 0.01
MMP28-207ENST00000619655 ADAMTSL5Q6ZMM2 481 aa15.14■□□□□ 0.01
MMP28-207ENST00000619655 GATD1Q8NB37 220 aa15.14■□□□□ 0.01
MMP28-207ENST00000619655 RNF114Q9Y508 228 aa15.14■□□□□ 0.01
MMP28-207ENST00000619655 KRTDAPP60985 99 aa15.13■□□□□ 0.01
MMP28-207ENST00000619655 PMCHL1Q16048 86 aa15.13■□□□□ 0.01
MMP28-207ENST00000619655 SAMD13Q5VXD3 122 aa15.13■□□□□ 0.01
MMP28-207ENST00000619655 URB1-AS1Q96HZ7 61 aa15.13■□□□□ 0.01
MMP28-207ENST00000619655 D6R8Y8 96 aa15.12■□□□□ 0.01
MMP28-207ENST00000619655 FAM104BQ5XKR9 115 aa15.12■□□□□ 0.01
MMP28-207ENST00000619655 TEX43Q6ZNM6 134 aa15.12■□□□□ 0.01
MMP28-207ENST00000619655 DLX4Q92988 240 aaPredicted RBP15.12■□□□□ 0.01
MMP28-207ENST00000619655 SORL1Q92673 2214 aa15.12■□□□□ 0.01
MMP28-207ENST00000619655 HIVEP2P31629 2446 aa15.12■□□□□ 0.01
MMP28-207ENST00000619655 TRAV21A0A0B4J279 112 aa15.11■□□□□ 0.01
MMP28-207ENST00000619655 K7EQG2 157 aa15.11■□□□□ 0.01
MMP28-207ENST00000619655 M0R2Z0 102 aa15.11■□□□□ 0.01
MMP28-207ENST00000619655 ZNF25P17030 456 aaPredicted RBP15.11■□□□□ 0.01
MMP28-207ENST00000619655 TDRG1Q3Y452 100 aa15.11■□□□□ 0.01
MMP28-207ENST00000619655 OR10AG1Q8NH19 301 aa15.11■□□□□ 0.01
MMP28-207ENST00000619655 H3BVH4 76 aa15.11■□□□□ 0.01
MMP28-207ENST00000619655 OR9G4Q8NGQ1 327 aa15.11■□□□□ 0.01
MMP28-207ENST00000619655 FAM19A4Q96LR4 140 aa15.11■□□□□ 0.01
MMP28-207ENST00000619655 C20orf144Q9BQM9 153 aa15.11■□□□□ 0.01
MMP28-207ENST00000619655 CD28P10747 220 aa15.1■□□□□ 0.01
MMP28-207ENST00000619655 RNASE1P07998 156 aaKnown RBP15.1■□□□□ 0.01
MMP28-207ENST00000619655 SCGB2A2Q13296 93 aa15.1■□□□□ 0.01
MMP28-207ENST00000619655 MRPL51Q4U2R6 128 aaKnown RBP15.1■□□□□ 0.01
MMP28-207ENST00000619655 ZNF418Q8TF45 676 aaPredicted RBP15.1■□□□□ 0.01
MMP28-207ENST00000619655 PEMTQ9UBM1 199 aa15.1■□□□□ 0.01
MMP28-207ENST00000619655 SMKR1H3BMG3 65 aa15.09■□□□□ 0.01
MMP28-207ENST00000619655 ZNF705AQ6ZN79 300 aaPredicted RBP15.09■□□□□ 0.01
MMP28-207ENST00000619655 SPRY2O43597 315 aa15.09■□□□□ 0.01
MMP28-207ENST00000619655 CNFNQ9BYD5 112 aa15.09■□□□□ 0.01
MMP28-207ENST00000619655 AGRNO00468 2067 aa15.09■□□□□ 0.01
MMP28-207ENST00000619655 WNK1Q9H4A3 2382 aa15.08■□□□□ 0
MMP28-207ENST00000619655 NCR2O95944 276 aa15.08■□□□□ 0
MMP28-207ENST00000619655 LINC00614P0C842 121 aa15.08■□□□□ 0
MMP28-207ENST00000619655 ANXA2RQ3ZCQ2 193 aa15.08■□□□□ 0
MMP28-207ENST00000619655 LINC01006Q8NI28 216 aa15.08■□□□□ 0
MMP28-207ENST00000619655 MIEN1Q9BRT3 115 aa15.08■□□□□ 0
MMP28-207ENST00000619655 LOC389332A0A1B0GUA5 103 aa15.08■□□□□ 0
MMP28-207ENST00000619655 GAGE1Q13065 139 aa15.08■□□□□ 0
MMP28-207ENST00000619655 SPANXN1Q5VSR9 72 aa15.08■□□□□ 0
MMP28-207ENST00000619655 TMEM191AQ9H0A3 160 aa15.08■□□□□ 0
MMP28-207ENST00000619655 LY6G6DO95868 133 aa15.07■□□□□ 0
MMP28-207ENST00000619655 S100A4P26447 101 aaKnown RBP15.07■□□□□ 0
MMP28-207ENST00000619655 CKS2P33552 79 aa15.07■□□□□ 0
MMP28-207ENST00000619655 EBLN2Q6P2I7 272 aa15.07■□□□□ 0
MMP28-207ENST00000619655 ORMDL3Q8N138 153 aa15.07■□□□□ 0
MMP28-207ENST00000619655 PRELID3AQ96N28 172 aa15.07■□□□□ 0
MMP28-207ENST00000619655 DLEU1O43261 78 aa15.06■□□□□ 0
MMP28-207ENST00000619655 RAX2Q96IS3 184 aa15.06■□□□□ 0
MMP28-207ENST00000619655 TMEM208Q9BTX3 173 aa15.06■□□□□ 0
MMP28-207ENST00000619655 A0A0J9YX75 114 aa15.06■□□□□ 0
MMP28-207ENST00000619655 DYNLRB2Q8TF09 96 aa15.06■□□□□ 0
MMP28-207ENST00000619655 CITED2Q99967 270 aaPredicted RBP15.06■□□□□ 0
MMP28-207ENST00000619655 TRAV12-2A0A075B6T6 113 aa15.05■□□□□ 0
MMP28-207ENST00000619655 IGHV1-24A0A0C4DH33 117 aa15.05■□□□□ 0
MMP28-207ENST00000619655 EVI2AP22794 236 aa15.05■□□□□ 0
MMP28-207ENST00000619655 PRSS3P2Q8NHM4 247 aa15.05■□□□□ 0
MMP28-207ENST00000619655 CHCHD1Q96BP2 118 aaKnown RBP15.05■□□□□ 0
MMP28-207ENST00000619655 GOLT1BQ9Y3E0 138 aa15.05■□□□□ 0
MMP28-207ENST00000619655 TRAV12-3A0A0B4J271 114 aa15.05■□□□□ -0
MMP28-207ENST00000619655 GNRH2O43555 120 aa15.05■□□□□ -0
MMP28-207ENST00000619655 HILS1P60008 231 aa15.05■□□□□ -0
MMP28-207ENST00000619655 TMEM61Q8N0U2 210 aa15.05■□□□□ -0
MMP28-207ENST00000619655 Q8N976 141 aa15.05■□□□□ -0
MMP28-207ENST00000619655 VAMP8Q9BV40 100 aa15.05■□□□□ -0
MMP28-207ENST00000619655 PAM16Q9Y3D7 125 aa15.05■□□□□ -0
MMP28-207ENST00000619655 KLLNB2CW77 178 aa15.04■□□□□ -0
MMP28-207ENST00000619655 OR5AL1P0C617 328 aa15.04■□□□□ -0
MMP28-207ENST00000619655 C3orf79P0CE67 100 aa15.04■□□□□ -0
MMP28-207ENST00000619655 APRG1Q8IVJ8 170 aa15.04■□□□□ -0
MMP28-207ENST00000619655 TRBV7-9A0A0J9YWB2 115 aa15.04■□□□□ -0
MMP28-207ENST00000619655 M0R381 172 aa15.04■□□□□ -0
MMP28-207ENST00000619655 IFI27P40305 119 aaPredicted RBP15.04■□□□□ -0
MMP28-207ENST00000619655 ASIPP42127 132 aa15.04■□□□□ -0
MMP28-207ENST00000619655 RNF185Q96GF1 192 aa15.04■□□□□ -0
MMP28-207ENST00000619655 NIPBLQ6KC79 2804 aaeCLIP15.04■□□□□ -0
MMP28-207ENST00000619655 GAS8-AS1O95177 125 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms