RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 SMIM20Q8N5G0 67 aa10.41□□□□□ -0.74
PCDHA11-202ENST00000616325 SCGB3A1Q96QR1 104 aa10.41□□□□□ -0.74
PCDHA11-202ENST00000616325 CD3EP07766 207 aa10.4□□□□□ -0.74
PCDHA11-202ENST00000616325 PAX8Q06710 450 aa10.4□□□□□ -0.74
PCDHA11-202ENST00000616325 LAGE3Q14657 143 aa10.4□□□□□ -0.74
PCDHA11-202ENST00000616325 C3orf56Q8N813 242 aa10.4□□□□□ -0.74
PCDHA11-202ENST00000616325 MYMXA0A1B0GTQ4 84 aa10.4□□□□□ -0.74
PCDHA11-202ENST00000616325 RPL7P18124 248 aaKnown RBP10.4□□□□□ -0.74
PCDHA11-202ENST00000616325 TMEM78Q5T7P6 136 aa10.4□□□□□ -0.74
PCDHA11-202ENST00000616325 RAX2Q96IS3 184 aa10.4□□□□□ -0.74
PCDHA11-202ENST00000616325 SLC25A16P16260 332 aa10.4□□□□□ -0.75
PCDHA11-202ENST00000616325 MORN3Q6PF18 240 aaPredicted RBP10.4□□□□□ -0.75
PCDHA11-202ENST00000616325 BEX4Q9NWD9 120 aaPredicted RBP10.4□□□□□ -0.75
PCDHA11-202ENST00000616325 LINC00527Q9UJ94 153 aa10.4□□□□□ -0.75
PCDHA11-202ENST00000616325 FABP5P3A8MUU1 101 aa10.39□□□□□ -0.75
PCDHA11-202ENST00000616325 H3BRN7 92 aa10.39□□□□□ -0.75
PCDHA11-202ENST00000616325 DLX6P56179 175 aa10.39□□□□□ -0.75
PCDHA11-202ENST00000616325 GAGE5Q13069 117 aa10.39□□□□□ -0.75
PCDHA11-202ENST00000616325 GAGE6Q13070 117 aa10.39□□□□□ -0.75
PCDHA11-202ENST00000616325 ERG28Q9UKR5 140 aa10.39□□□□□ -0.75
PCDHA11-202ENST00000616325 SHISA9B4DS77 424 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 INS-IGF2F8WCM5 200 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 NBR2O15453 112 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 IGLV1-47P01700 117 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 HERV-K104P63124 156 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 TTC32Q5I0X7 151 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 CFAP126Q5VTH2 177 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 PRADC1Q9BSG0 188 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 ZFHX3Q15911 3703 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 A8MWV9 139 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 PLEKHB2Q96CS7 222 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 ZMAT4Q9H898 229 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 CENPEQ02224 2701 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 A0A087WX48 190 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 M0R381 172 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 SHISA2Q6UWI4 295 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 LINC00311Q8N616 119 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 Q8N8P6 123 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 PPDPFLQ8WWR9 84 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 C21orf62Q9NYP8 219 aa10.38□□□□□ -0.75
PCDHA11-202ENST00000616325 NDPQ00604 133 aa10.37□□□□□ -0.75
PCDHA11-202ENST00000616325 Q6ZQT7 251 aa10.37□□□□□ -0.75
PCDHA11-202ENST00000616325 IL17RELQ6ZVW7 336 aa10.37□□□□□ -0.75
PCDHA11-202ENST00000616325 PIP4P1Q86T03 277 aa10.37□□□□□ -0.75
PCDHA11-202ENST00000616325 CARD19Q96LW7 228 aa10.37□□□□□ -0.75
PCDHA11-202ENST00000616325 IGHV3OR16-10A0A075B7F0 116 aa10.37□□□□□ -0.75
PCDHA11-202ENST00000616325 A6NJY4 79 aa10.37□□□□□ -0.75
PCDHA11-202ENST00000616325 PRAC2D3DTV9 90 aa10.37□□□□□ -0.75
PCDHA11-202ENST00000616325 HOXB4P17483 251 aaPredicted RBP10.37□□□□□ -0.75
PCDHA11-202ENST00000616325 ZNF672Q499Z4 452 aaPredicted RBP10.37□□□□□ -0.75
PCDHA11-202ENST00000616325 MFAP4P55083 255 aa10.36□□□□□ -0.75
PCDHA11-202ENST00000616325 SRSF1Q07955 248 aaKnown RBP eCLIP10.36□□□□□ -0.75
PCDHA11-202ENST00000616325 GAGE2BQ13066 116 aa10.36□□□□□ -0.75
PCDHA11-202ENST00000616325 Q1RN00 199 aa10.36□□□□□ -0.75
PCDHA11-202ENST00000616325 GAGE2EQ4V326 116 aa10.36□□□□□ -0.75
PCDHA11-202ENST00000616325 GAGE2DQ9UEU5 116 aa10.36□□□□□ -0.75
PCDHA11-202ENST00000616325 TRBV7-3A0A075B6L6 115 aa10.36□□□□□ -0.75
PCDHA11-202ENST00000616325 H7C1H1 209 aa10.36□□□□□ -0.75
PCDHA11-202ENST00000616325 MGPP08493 103 aa10.36□□□□□ -0.75
PCDHA11-202ENST00000616325 LGALS1P09382 135 aaKnown RBP10.36□□□□□ -0.75
PCDHA11-202ENST00000616325 GATD1Q8NB37 220 aa10.36□□□□□ -0.75
PCDHA11-202ENST00000616325 DPM3Q9P2X0 92 aa10.36□□□□□ -0.75
PCDHA11-202ENST00000616325 C9JAW5 83 aa10.36□□□□□ -0.75
PCDHA11-202ENST00000616325 SNCGO76070 127 aa10.36□□□□□ -0.75
PCDHA11-202ENST00000616325 TSPAN13O95857 204 aa10.36□□□□□ -0.75
PCDHA11-202ENST00000616325 LYPD1Q8N2G4 141 aa10.36□□□□□ -0.75
PCDHA11-202ENST00000616325 CFHR4Q92496 578 aa10.36□□□□□ -0.75
PCDHA11-202ENST00000616325 TCL1BO95988 128 aa10.35□□□□□ -0.75
PCDHA11-202ENST00000616325 PLNP26678 52 aa10.35□□□□□ -0.75
PCDHA11-202ENST00000616325 RPL11P62913 178 aaKnown RBP10.35□□□□□ -0.75
PCDHA11-202ENST00000616325 TAL2Q16559 108 aa10.35□□□□□ -0.75
PCDHA11-202ENST00000616325 DYNAPQ8N1N2 210 aa10.35□□□□□ -0.75
PCDHA11-202ENST00000616325 ANKRD29Q8N6D5 301 aa10.35□□□□□ -0.75
PCDHA11-202ENST00000616325 ZNF688P0C7X2 276 aa10.35□□□□□ -0.75
PCDHA11-202ENST00000616325 F8VRH5 84 aa10.35□□□□□ -0.75
PCDHA11-202ENST00000616325 FOXC1Q12948 553 aa10.35□□□□□ -0.75
PCDHA11-202ENST00000616325 CEACAM4O75871 244 aa10.34□□□□□ -0.75
PCDHA11-202ENST00000616325 DEFB1P60022 68 aa10.34□□□□□ -0.75
PCDHA11-202ENST00000616325 PSMG4Q5JS54 123 aa10.34□□□□□ -0.75
PCDHA11-202ENST00000616325 TEN1Q86WV5 123 aa10.34□□□□□ -0.75
PCDHA11-202ENST00000616325 HRNRQ86YZ3 2850 aaPredicted RBP10.34□□□□□ -0.75
PCDHA11-202ENST00000616325 HIVEP3Q5T1R4 2406 aa10.34□□□□□ -0.75
PCDHA11-202ENST00000616325 IGLC6P0CF74 106 aa10.34□□□□□ -0.75
PCDHA11-202ENST00000616325 CCL21O00585 134 aa10.33□□□□□ -0.76
PCDHA11-202ENST00000616325 CRYGBP07316 175 aa10.33□□□□□ -0.76
PCDHA11-202ENST00000616325 CCDC179H3BU77 68 aa10.33□□□□□ -0.76
PCDHA11-202ENST00000616325 IGHV4-39P01824 125 aa10.33□□□□□ -0.76
PCDHA11-202ENST00000616325 S100A4P26447 101 aaKnown RBP10.33□□□□□ -0.76
PCDHA11-202ENST00000616325 TMEM170BQ5T4T1 132 aa10.33□□□□□ -0.76
PCDHA11-202ENST00000616325 PVRIGQ6DKI7 326 aa10.33□□□□□ -0.76
PCDHA11-202ENST00000616325 TRPT1Q86TN4 253 aaKnown RBP10.33□□□□□ -0.76
PCDHA11-202ENST00000616325 IGHV3-64A0A075B6Q5 118 aa10.33□□□□□ -0.76
PCDHA11-202ENST00000616325 CLEC3BP05452 202 aa10.33□□□□□ -0.76
PCDHA11-202ENST00000616325 CLEC19AQ6UXS0 136 aa10.33□□□□□ -0.76
PCDHA11-202ENST00000616325 PIFOQ8TCI5 191 aa10.33□□□□□ -0.76
PCDHA11-202ENST00000616325 USP9YO00507 2555 aaPredicted RBP10.33□□□□□ -0.76
PCDHA11-202ENST00000616325 SETD2Q9BYW2 2564 aaPredicted RBP10.32□□□□□ -0.76
PCDHA11-202ENST00000616325 C5orf64Q2M2E5 130 aa10.32□□□□□ -0.76
PCDHA11-202ENST00000616325 IGFL3Q6UXB1 125 aa10.32□□□□□ -0.76
PCDHA11-202ENST00000616325 B9A039 149 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms