RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 P01737 135 aa7.57□□□□□ -1.2
LINC00649-217ENST00000616030 ZNF705DP0CH99 300 aaPredicted RBP7.57□□□□□ -1.2
LINC00649-217ENST00000616030 ZNF705BP0CI00 300 aaPredicted RBP7.57□□□□□ -1.2
LINC00649-217ENST00000616030 PRB4P10163 310 aaPredicted RBP7.57□□□□□ -1.2
LINC00649-217ENST00000616030 HLA-DRB4P13762 266 aa7.57□□□□□ -1.2
LINC00649-217ENST00000616030 CRISP2P16562 243 aa7.57□□□□□ -1.2
LINC00649-217ENST00000616030 S100PP25815 95 aa7.57□□□□□ -1.2
LINC00649-217ENST00000616030 TSPOP30536 169 aa7.57□□□□□ -1.2
LINC00649-217ENST00000616030 LEPP41159 167 aa7.57□□□□□ -1.2
LINC00649-217ENST00000616030 CT83Q5H943 113 aa7.57□□□□□ -1.2
LINC00649-217ENST00000616030 FAM162BQ5T6X4 162 aa7.57□□□□□ -1.2
LINC00649-217ENST00000616030 KCNIP4Q6PIL6 250 aa7.57□□□□□ -1.2
LINC00649-217ENST00000616030 Q8NAQ8 132 aa7.57□□□□□ -1.2
LINC00649-217ENST00000616030 CSNK1G2-AS1Q8NCQ2 148 aa7.57□□□□□ -1.2
LINC00649-217ENST00000616030 BTF3L4Q96K17 158 aa7.57□□□□□ -1.2
LINC00649-217ENST00000616030 FAM19A4Q96LR4 140 aa7.57□□□□□ -1.2
LINC00649-217ENST00000616030 C8orf49Q96NF6 230 aa7.57□□□□□ -1.2
LINC00649-217ENST00000616030 RNASE7Q9H1E1 156 aaKnown RBP7.57□□□□□ -1.2
LINC00649-217ENST00000616030 V9GYV3 84 aa7.57□□□□□ -1.2
LINC00649-217ENST00000616030 HLA-DRB4X5D2U9 266 aa7.57□□□□□ -1.2
LINC00649-217ENST00000616030 NUPR2A6NF83 97 aa7.56□□□□□ -1.2
LINC00649-217ENST00000616030 A8MTW9 85 aa7.56□□□□□ -1.2
LINC00649-217ENST00000616030 RPS20P60866 119 aaKnown RBP7.56□□□□□ -1.2
LINC00649-217ENST00000616030 TMEM88Q6PEY1 159 aa7.56□□□□□ -1.2
LINC00649-217ENST00000616030 RPP21Q9H633 154 aaKnown RBP7.56□□□□□ -1.2
LINC00649-217ENST00000616030 IL36BQ9NZH7 164 aa7.56□□□□□ -1.2
LINC00649-217ENST00000616030 KMT2AQ03164 3969 aa7.56□□□□□ -1.2
LINC00649-217ENST00000616030 XKRY2A2RUG3 117 aa7.55□□□□□ -1.2
LINC00649-217ENST00000616030 A8MWL6 223 aa7.55□□□□□ -1.2
LINC00649-217ENST00000616030 H3BMM0 161 aa7.55□□□□□ -1.2
LINC00649-217ENST00000616030 J3QL48 77 aa7.55□□□□□ -1.2
LINC00649-217ENST00000616030 GPX1P07203 203 aa7.55□□□□□ -1.2
LINC00649-217ENST00000616030 PFN1P07737 140 aaKnown RBP7.55□□□□□ -1.2
LINC00649-217ENST00000616030 MIFP14174 115 aa7.55□□□□□ -1.2
LINC00649-217ENST00000616030 CRIP1P50238 77 aa7.55□□□□□ -1.2
LINC00649-217ENST00000616030 DEFB1P60022 68 aa7.55□□□□□ -1.2
LINC00649-217ENST00000616030 RPL19P84098 196 aaKnown RBP7.55□□□□□ -1.2
LINC00649-217ENST00000616030 GDF5OSQ5U4N7 250 aa7.55□□□□□ -1.2
LINC00649-217ENST00000616030 CBLN2Q8IUK8 224 aa7.55□□□□□ -1.2
LINC00649-217ENST00000616030 ZFAND2AQ8N6M9 145 aa7.55□□□□□ -1.2
LINC00649-217ENST00000616030 OR11H2Q8NH07 326 aa7.55□□□□□ -1.2
LINC00649-217ENST00000616030 TRAV9-1A0A075B6T8 112 aa7.54□□□□□ -1.2
LINC00649-217ENST00000616030 TRAV21A0A0B4J279 112 aa7.54□□□□□ -1.2
LINC00649-217ENST00000616030 TMEM189A5PLL7 270 aa7.54□□□□□ -1.2
LINC00649-217ENST00000616030 FAM231BA6NCW3 169 aa7.54□□□□□ -1.2
LINC00649-217ENST00000616030 KNCNA6PVL3 124 aa7.54□□□□□ -1.2
LINC00649-217ENST00000616030 KLLNB2CW77 178 aa7.54□□□□□ -1.2
LINC00649-217ENST00000616030 SH2D1AO60880 128 aa7.54□□□□□ -1.2
LINC00649-217ENST00000616030 NUTF2P61970 127 aaKnown RBP7.54□□□□□ -1.2
LINC00649-217ENST00000616030 ACTL10Q5JWF8 245 aa7.54□□□□□ -1.2
LINC00649-217ENST00000616030 CEMP1Q6PRD7 247 aaPredicted RBP7.54□□□□□ -1.2
LINC00649-217ENST00000616030 OR2D3Q8NGH3 330 aa7.54□□□□□ -1.2
LINC00649-217ENST00000616030 TSKUQ8WUA8 353 aa7.54□□□□□ -1.2
LINC00649-217ENST00000616030 C1QTNF4Q9BXJ3 329 aa7.54□□□□□ -1.2
LINC00649-217ENST00000616030 GFRA4Q9GZZ7 299 aa7.54□□□□□ -1.2
LINC00649-217ENST00000616030 X6R8D5 127 aa7.54□□□□□ -1.2
LINC00649-217ENST00000616030 SMIM27A0A1W2PRY6 76 aa7.53□□□□□ -1.2
LINC00649-217ENST00000616030 AMBPP02760 352 aa7.53□□□□□ -1.2
LINC00649-217ENST00000616030 CDKN1BP46527 198 aa7.53□□□□□ -1.2
LINC00649-217ENST00000616030 ZNF80P51504 273 aaPredicted RBP7.53□□□□□ -1.2
LINC00649-217ENST00000616030 ELOBQ15370 118 aa7.53□□□□□ -1.2
LINC00649-217ENST00000616030 Q6AWC8 147 aa7.53□□□□□ -1.2
LINC00649-217ENST00000616030 NEU1Q99519 415 aa7.53□□□□□ -1.2
LINC00649-217ENST00000616030 TRBV24-1A0A075B6N3 115 aa7.52□□□□□ -1.21
LINC00649-217ENST00000616030 C7orf71A4D174 169 aa7.52□□□□□ -1.21
LINC00649-217ENST00000616030 COLCA2A8K830 154 aa7.52□□□□□ -1.21
LINC00649-217ENST00000616030 IGKV3-20P01619 116 aa7.52□□□□□ -1.21
LINC00649-217ENST00000616030 ORM1P02763 201 aa7.52□□□□□ -1.21
LINC00649-217ENST00000616030 RNASE4P34096 147 aaKnown RBP7.52□□□□□ -1.21
LINC00649-217ENST00000616030 AMTNQ6UX39 209 aa7.52□□□□□ -1.21
LINC00649-217ENST00000616030 ZNF705AQ6ZN79 300 aaPredicted RBP7.52□□□□□ -1.21
LINC00649-217ENST00000616030 LINC00476Q8WZB0 136 aa7.52□□□□□ -1.21
LINC00649-217ENST00000616030 YPEL4Q96NS1 127 aa7.52□□□□□ -1.21
LINC00649-217ENST00000616030 PYGO2Q9BRQ0 406 aa7.52□□□□□ -1.21
LINC00649-217ENST00000616030 NAT8BQ9UHF3 227 aa7.52□□□□□ -1.21
LINC00649-217ENST00000616030 URGCP-MRPS24S4R325 110 aa7.52□□□□□ -1.21
LINC00649-217ENST00000616030 CXCL1P09341 107 aa7.51□□□□□ -1.21
LINC00649-217ENST00000616030 RBMY1A1P0DJD3 496 aaKnown RBP7.51□□□□□ -1.21
LINC00649-217ENST00000616030 RBMY1CP0DJD4 496 aa7.51□□□□□ -1.21
LINC00649-217ENST00000616030 FOXA3P55318 350 aaPredicted RBP7.51□□□□□ -1.21
LINC00649-217ENST00000616030 FAM3BP58499 235 aaPredicted RBP7.51□□□□□ -1.21
LINC00649-217ENST00000616030 RBMY1FQ15415 496 aaKnown RBP7.51□□□□□ -1.21
LINC00649-217ENST00000616030 PHLDA1Q8WV24 401 aaPredicted RBP7.51□□□□□ -1.21
LINC00649-217ENST00000616030 KLK5Q9Y337 293 aaPredicted RBP7.51□□□□□ -1.21
LINC00649-217ENST00000616030 IGHV4-28A0A0C4DH34 117 aa7.5□□□□□ -1.21
LINC00649-217ENST00000616030 A0A1W2PPQ1 181 aa7.5□□□□□ -1.21
LINC00649-217ENST00000616030 J3KRW8 73 aa7.5□□□□□ -1.21
LINC00649-217ENST00000616030 TCTAP57738 103 aa7.5□□□□□ -1.21
LINC00649-217ENST00000616030 SPINK13Q1W4C9 94 aa7.5□□□□□ -1.21
LINC00649-217ENST00000616030 COX19Q49B96 90 aa7.5□□□□□ -1.21
LINC00649-217ENST00000616030 PRR9Q5T870 116 aa7.5□□□□□ -1.21
LINC00649-217ENST00000616030 C11orf45Q8TAV5 145 aa7.5□□□□□ -1.21
LINC00649-217ENST00000616030 KCNS1Q96KK3 526 aa7.5□□□□□ -1.21
LINC00649-217ENST00000616030 FAM210BQ96KR6 192 aa7.5□□□□□ -1.21
LINC00649-217ENST00000616030 C20orf144Q9BQM9 153 aa7.5□□□□□ -1.21
LINC00649-217ENST00000616030 PGPEP1Q9NXJ5 209 aa7.5□□□□□ -1.21
LINC00649-217ENST00000616030 DNAH6Q9C0G6 4158 aa7.49□□□□□ -1.21
LINC00649-217ENST00000616030 TGIF2-C20orf24A0A0A6YYL0 155 aa7.49□□□□□ -1.21
LINC00649-217ENST00000616030 HIGD1CA8MV81 97 aa7.49□□□□□ -1.21
LINC00649-217ENST00000616030 M0R2Z0 102 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms