RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 SMIM2Q9BVW6 85 aa7.51□□□□□ -1.21
TNFRSF9-204ENST00000615230 FNDC4Q9H6D8 234 aaPredicted RBP7.51□□□□□ -1.21
TNFRSF9-204ENST00000615230 KIR2DL5BA0A0G2JN68 375 aa7.51□□□□□ -1.21
TNFRSF9-204ENST00000615230 KIR2DL5BA0A0G2JPC4 375 aa7.51□□□□□ -1.21
TNFRSF9-204ENST00000615230 LINC01548A6NM66 108 aa7.51□□□□□ -1.21
TNFRSF9-204ENST00000615230 KIR2DL5AQ8N109 375 aa7.51□□□□□ -1.21
TNFRSF9-204ENST00000615230 KIR2DL5BQ8NHK3 375 aa7.51□□□□□ -1.21
TNFRSF9-204ENST00000615230 ZC2HC1AQ96GY0 325 aa7.51□□□□□ -1.21
TNFRSF9-204ENST00000615230 RSPO3Q9BXY4 272 aaPredicted RBP7.51□□□□□ -1.21
TNFRSF9-204ENST00000615230 LAMTOR3Q9UHA4 124 aa7.5□□□□□ -1.21
TNFRSF9-204ENST00000615230 CNTRLQ7Z7A1 2325 aa7.5□□□□□ -1.21
TNFRSF9-204ENST00000615230 DEFB135Q30KP9 77 aa7.5□□□□□ -1.21
TNFRSF9-204ENST00000615230 ATOH7Q8N100 152 aa7.5□□□□□ -1.21
TNFRSF9-204ENST00000615230 PRO0255Q9UI72 69 aa7.5□□□□□ -1.21
TNFRSF9-204ENST00000615230 TRAV13-2A0A0B4J235 113 aa7.5□□□□□ -1.21
TNFRSF9-204ENST00000615230 MTURNQ8N3F0 131 aa7.5□□□□□ -1.21
TNFRSF9-204ENST00000615230 ZNF503Q96F45 646 aa7.5□□□□□ -1.21
TNFRSF9-204ENST00000615230 ADAMTSL5Q6ZMM2 481 aa7.5□□□□□ -1.21
TNFRSF9-204ENST00000615230 SNHG12Q9BXW3 62 aa7.5□□□□□ -1.21
TNFRSF9-204ENST00000615230 PCDH15Q96QU1 1955 aa7.5□□□□□ -1.21
TNFRSF9-204ENST00000615230 IGHV3-64A0A075B6Q5 118 aa7.5□□□□□ -1.21
TNFRSF9-204ENST00000615230 H7C423 109 aa7.5□□□□□ -1.21
TNFRSF9-204ENST00000615230 IL15RAQ13261 267 aa7.5□□□□□ -1.21
TNFRSF9-204ENST00000615230 MRPL51Q4U2R6 128 aaKnown RBP7.5□□□□□ -1.21
TNFRSF9-204ENST00000615230 ZNF702PQ9H963 129 aa7.5□□□□□ -1.21
TNFRSF9-204ENST00000615230 TRBV10-1A0A0K0K1A3 114 aa7.49□□□□□ -1.21
TNFRSF9-204ENST00000615230 IGLL5B9A064 214 aa7.49□□□□□ -1.21
TNFRSF9-204ENST00000615230 LY6LH3BQJ8 138 aa7.49□□□□□ -1.21
TNFRSF9-204ENST00000615230 ORAOV1Q8WV07 137 aa7.49□□□□□ -1.21
TNFRSF9-204ENST00000615230 ESPL1Q14674 2120 aa7.49□□□□□ -1.21
TNFRSF9-204ENST00000615230 LINC01545Q5VT33 79 aa7.49□□□□□ -1.21
TNFRSF9-204ENST00000615230 RITA1Q96K30 269 aa7.49□□□□□ -1.21
TNFRSF9-204ENST00000615230 SDK2Q58EX2 2172 aa7.49□□□□□ -1.21
TNFRSF9-204ENST00000615230 LRP4O75096 1905 aa7.49□□□□□ -1.21
TNFRSF9-204ENST00000615230 MSMPQ1L6U9 139 aa7.49□□□□□ -1.21
TNFRSF9-204ENST00000615230 UBE2WQ96B02 151 aa7.49□□□□□ -1.21
TNFRSF9-204ENST00000615230 A0A0J9YX75 114 aa7.48□□□□□ -1.21
TNFRSF9-204ENST00000615230 TMEM213A2RRL7 107 aa7.48□□□□□ -1.21
TNFRSF9-204ENST00000615230 COX7A2LO14548 114 aa7.48□□□□□ -1.21
TNFRSF9-204ENST00000615230 DDTP30046 118 aa7.48□□□□□ -1.21
TNFRSF9-204ENST00000615230 DEFB114Q30KQ6 69 aa7.48□□□□□ -1.21
TNFRSF9-204ENST00000615230 SLC25A29Q8N8R3 303 aa7.48□□□□□ -1.21
TNFRSF9-204ENST00000615230 A8MWP6 167 aa7.48□□□□□ -1.21
TNFRSF9-204ENST00000615230 ZFP2Q6ZN57 461 aa7.48□□□□□ -1.21
TNFRSF9-204ENST00000615230 KIF26BQ2KJY2 2108 aa7.48□□□□□ -1.21
TNFRSF9-204ENST00000615230 ESDP10768 282 aa7.48□□□□□ -1.21
TNFRSF9-204ENST00000615230 IGLL1P15814 213 aa7.48□□□□□ -1.21
TNFRSF9-204ENST00000615230 STPG4Q8N801 248 aa7.47□□□□□ -1.21
TNFRSF9-204ENST00000615230 CAMK2N2Q96S95 79 aa7.47□□□□□ -1.21
TNFRSF9-204ENST00000615230 ASXL3Q9C0F0 2248 aa7.47□□□□□ -1.21
TNFRSF9-204ENST00000615230 NUPR2A6NF83 97 aa7.47□□□□□ -1.21
TNFRSF9-204ENST00000615230 NDUFA1O15239 70 aa7.47□□□□□ -1.21
TNFRSF9-204ENST00000615230 IGKV1-17P01599 117 aa7.47□□□□□ -1.21
TNFRSF9-204ENST00000615230 LGALS9BQ3B8N2 356 aa7.47□□□□□ -1.21
TNFRSF9-204ENST00000615230 ZNF580Q9UK33 172 aa7.47□□□□□ -1.21
TNFRSF9-204ENST00000615230 TRBV7-3A0A075B6L6 115 aa7.47□□□□□ -1.21
TNFRSF9-204ENST00000615230 IGHV3-38A0A0C4DH36 116 aa7.47□□□□□ -1.21
TNFRSF9-204ENST00000615230 DEFB125Q8N687 156 aa7.46□□□□□ -1.21
TNFRSF9-204ENST00000615230 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.46□□□□□ -1.21
TNFRSF9-204ENST00000615230 A0A096LPF7 62 aa7.46□□□□□ -1.21
TNFRSF9-204ENST00000615230 PRSS47A8MTI9 375 aa7.46□□□□□ -1.21
TNFRSF9-204ENST00000615230 SMKR1H3BMG3 65 aa7.46□□□□□ -1.21
TNFRSF9-204ENST00000615230 INAFM2P0DMQ5 153 aa7.46□□□□□ -1.21
TNFRSF9-204ENST00000615230 SRSF3P84103 164 aaKnown RBP7.46□□□□□ -1.21
TNFRSF9-204ENST00000615230 Q9HAA7 133 aa7.46□□□□□ -1.21
TNFRSF9-204ENST00000615230 SYS1-DBNDD2H3BUS1 97 aa7.46□□□□□ -1.22
TNFRSF9-204ENST00000615230 RPL18AQ02543 176 aaKnown RBP7.46□□□□□ -1.22
TNFRSF9-204ENST00000615230 F6UB75 175 aa7.46□□□□□ -1.22
TNFRSF9-204ENST00000615230 GNRH2O43555 120 aa7.46□□□□□ -1.22
TNFRSF9-204ENST00000615230 TMEM61Q8N0U2 210 aa7.46□□□□□ -1.22
TNFRSF9-204ENST00000615230 Q6ZQT7 251 aa7.46□□□□□ -1.22
TNFRSF9-204ENST00000615230 LINC01006Q8NI28 216 aa7.46□□□□□ -1.22
TNFRSF9-204ENST00000615230 V9GYV3 84 aa7.46□□□□□ -1.22
TNFRSF9-204ENST00000615230 TRAV8-3A0A0A6YYJ7 113 aa7.45□□□□□ -1.22
TNFRSF9-204ENST00000615230 SPCS1Q9Y6A9 102 aa7.45□□□□□ -1.22
TNFRSF9-204ENST00000615230 IGHV3-30P01768 117 aa7.45□□□□□ -1.22
TNFRSF9-204ENST00000615230 IGHV3-33P01772 117 aa7.45□□□□□ -1.22
TNFRSF9-204ENST00000615230 IGHV3-30-3P0DP02 117 aa7.45□□□□□ -1.22
TNFRSF9-204ENST00000615230 IGHV3-30-5P0DP03 117 aa7.45□□□□□ -1.22
TNFRSF9-204ENST00000615230 MRPL52Q86TS9 123 aaKnown RBP7.45□□□□□ -1.22
TNFRSF9-204ENST00000615230 AHCTF1Q8WYP5 2266 aa7.45□□□□□ -1.22
TNFRSF9-204ENST00000615230 CRYGBP07316 175 aa7.45□□□□□ -1.22
TNFRSF9-204ENST00000615230 P0DMU3 169 aa7.45□□□□□ -1.22
TNFRSF9-204ENST00000615230 FAM231AP0DMU4 169 aa7.45□□□□□ -1.22
TNFRSF9-204ENST00000615230 FAM231CP0DMU5 169 aa7.45□□□□□ -1.22
TNFRSF9-204ENST00000615230 RPL32P62910 135 aaKnown RBP7.45□□□□□ -1.22
TNFRSF9-204ENST00000615230 SUMO4Q6EEV6 95 aa7.45□□□□□ -1.22
TNFRSF9-204ENST00000615230 LINC00479Q96M42 142 aa7.45□□□□□ -1.22
TNFRSF9-204ENST00000615230 TRAV8-4A0A0B4J246 113 aa7.44□□□□□ -1.22
TNFRSF9-204ENST00000615230 NHLRC4P0CG21 123 aaPredicted RBP7.44□□□□□ -1.22
TNFRSF9-204ENST00000615230 CCDC140Q96MF4 163 aa7.44□□□□□ -1.22
TNFRSF9-204ENST00000615230 ZNF747Q9BV97 191 aa7.44□□□□□ -1.22
TNFRSF9-204ENST00000615230 A0A1B0GWB2 263 aa7.44□□□□□ -1.22
TNFRSF9-204ENST00000615230 WISP2O76076 250 aa7.44□□□□□ -1.22
TNFRSF9-204ENST00000615230 RBMY1FQ15415 496 aaKnown RBP7.44□□□□□ -1.22
TNFRSF9-204ENST00000615230 ZNF726P1Q15940 193 aa7.44□□□□□ -1.22
TNFRSF9-204ENST00000615230 FANCD2OSQ96PS1 177 aa7.44□□□□□ -1.22
TNFRSF9-204ENST00000615230 CEP290O15078 2479 aa7.44□□□□□ -1.22
TNFRSF9-204ENST00000615230 A0A0U1RRA0 63 aa7.44□□□□□ -1.22
TNFRSF9-204ENST00000615230 PSMB8P28062 276 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms