RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 VGLL1Q99990 258 aa8.38□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 AAMDCQ9H7C9 122 aa8.38□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 ANKHD1Q8IWZ3 2542 aaKnown RBP8.38□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 TRBV25-1A0A075B6N4 114 aa8.37□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 SCGB1D4Q6XE38 83 aa8.37□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 C5orf56Q8N8D9 126 aa8.37□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 UBTD1Q9HAC8 227 aa8.37□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 SMAD5-AS1Q9Y6J3 95 aa8.37□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 H3BUA1 57 aa8.37□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 OR5A1Q8NGJ0 315 aa8.37□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 U3KQK5 164 aa8.37□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 NCBP2LA6PVI3 153 aaKnown RBP8.37□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 C19orf84I3L1E1 186 aa8.37□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 IGHG4P01861 327 aa8.37□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 SAA4P35542 130 aa8.37□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 CRYBA4P53673 196 aa8.37□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 LY6DQ14210 128 aa8.37□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 MAPKAPK5-AS1Q8N8E1 139 aa8.37□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 MRPL35Q9NZE8 188 aaKnown RBP8.37□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 RPS20P60866 119 aaKnown RBP8.36□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 SRSF9Q13242 221 aaKnown RBP eCLIP8.36□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 SYT8Q8NBV8 401 aa8.36□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 OR4X2Q8NGF9 303 aa8.36□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 BPESC1Q9GZL8 116 aa8.36□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 SS18L2Q9UHA2 77 aa8.36□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 FAM223BA6NKX1 122 aa8.36□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 IGHV4-39P01824 125 aa8.36□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 GAGE13Q4V321 117 aa8.36□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 FAM104BQ5XKR9 115 aa8.36□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 NEGR1Q7Z3B1 354 aa8.36□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 FAM223AQ8IWN6 122 aa8.36□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 RNF182Q8N6D2 247 aa8.36□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 MRPL16Q9NX20 251 aaKnown RBP8.36□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 COL12A1Q99715 3063 aa8.36□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 CD300EQ496F6 205 aaPredicted RBP8.36□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 CNFNQ9BYD5 112 aa8.36□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 IGF1P05019 195 aa8.35□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 Q6ZQT7 251 aa8.35□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 OR9G4Q8NGQ1 327 aa8.35□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 MAP1LC3AQ9H492 121 aa8.35□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 GEMIN7Q9H840 131 aaKnown RBP8.35□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 BUB3O43684 328 aa8.35□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 IGKCP01834 107 aa8.35□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 SCGB1C2P0DMR2 95 aa8.35□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 GNLYP22749 145 aa8.35□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 GATA3P23771 443 aa8.35□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 PIFOQ8TCI5 191 aa8.35□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 C10orf105Q8TEF2 133 aa8.35□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 SLC50A1Q9BRV3 221 aa8.35□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 HRNRQ86YZ3 2850 aaPredicted RBP8.35□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 CSPG4Q6UVK1 2322 aa8.34□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 CLPSL1A2RUU4 121 aa8.34□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 SVIPQ8NHG7 77 aa8.34□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 MOB4Q9Y3A3 225 aa8.34□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 LINC01548A6NM66 108 aa8.34□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 SPINK8P0C7L1 97 aa8.34□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 ZNF80P51504 273 aaPredicted RBP8.34□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 EEF1AKMT3Q96AZ1 226 aa8.34□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 BEX4Q9NWD9 120 aaPredicted RBP8.34□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 CHTOPQ9Y3Y2 248 aaKnown RBP8.34□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 IGHV1-69DA0A0B4J2H0 117 aa8.34□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 LINC01546A6NGU7 62 aa8.34□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 IGHV1-69P01742 117 aa8.34□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 C3orf56Q8N813 242 aa8.34□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 PRR25Q96S07 402 aa8.34□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 PIMREGQ9BSJ6 248 aa8.34□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 PGPEP1Q9NXJ5 209 aa8.34□□□□□ -1.07
SENP3-EIF4A1-201ENST00000614237 ATP6V0E1O15342 81 aa8.33□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 ZNF575Q86XF7 245 aa8.33□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 CCDC140Q96MF4 163 aa8.33□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 IGLL5B9A064 214 aa8.33□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 BMI1P35226 326 aa8.33□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 C15orf32Q32M92 178 aa8.33□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 LGALS9BQ3B8N2 356 aa8.33□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 LGALS9CQ6DKI2 356 aa8.33□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 HLA-DRB4P13762 266 aa8.33□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 DSCR9P59020 149 aa8.33□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 HLA-DRB4X5D2U9 266 aa8.33□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 MT-ATP8P03928 68 aa8.32□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 IGHV3-64A0A075B6Q5 118 aa8.32□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 M0R381 172 aa8.32□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 TNFRSF6BO95407 300 aa8.32□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 TRGV3P03979 118 aa8.32□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 MGPP08493 103 aa8.32□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 IGLC6P0CF74 106 aa8.32□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 SMIM17P0DL12 118 aa8.32□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 DEFB1P60022 68 aa8.32□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 C12orf74Q32Q52 190 aa8.32□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 MYOZ3Q8TDC0 251 aa8.32□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 KLHL30-AS1Q8NEE0 82 aa8.32□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 SPANXB1Q9NS25 103 aaPredicted RBP8.32□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 LINC01549A6NIU2 74 aa8.31□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.31□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 ZFP2Q6ZN57 461 aa8.31□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 SETD2Q9BYW2 2564 aaPredicted RBP8.31□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 DPM2O94777 84 aa8.31□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 LINC01559Q495D7 138 aa8.31□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 SPANXN1Q5VSR9 72 aa8.31□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 CEND1Q8N111 149 aa8.31□□□□□ -1.08
SENP3-EIF4A1-201ENST00000614237 LENEPQ9Y5L5 61 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms