RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 MRPL35Q9NZE8 188 aaKnown RBP8.61□□□□□ -1.03
ATF3-211ENST00000613954 IGHV4-4A0A075B6R2 117 aa8.61□□□□□ -1.03
ATF3-211ENST00000613954 IGHV4-30-2A0A087WSY4 118 aa8.61□□□□□ -1.03
ATF3-211ENST00000613954 TRAV12-1A0A0B4J245 112 aa8.61□□□□□ -1.03
ATF3-211ENST00000613954 K7ERJ3 54 aa8.61□□□□□ -1.03
ATF3-211ENST00000613954 IGHV3-23P01764 117 aa8.61□□□□□ -1.03
ATF3-211ENST00000613954 ERCC8Q13216 396 aa8.61□□□□□ -1.03
ATF3-211ENST00000613954 EBI3Q14213 229 aa8.61□□□□□ -1.03
ATF3-211ENST00000613954 IGFL4Q6B9Z1 124 aa8.61□□□□□ -1.03
ATF3-211ENST00000613954 Q8N6K4 173 aa8.61□□□□□ -1.03
ATF3-211ENST00000613954 NRGNQ92686 78 aa8.61□□□□□ -1.03
ATF3-211ENST00000613954 MRPL53Q96EL3 112 aaKnown RBP8.61□□□□□ -1.03
ATF3-211ENST00000613954 IGKV3D-20A0A0C4DH25 116 aa8.6□□□□□ -1.03
ATF3-211ENST00000613954 BUB3O43684 328 aa8.6□□□□□ -1.03
ATF3-211ENST00000613954 GATA1P15976 413 aaPredicted RBP8.6□□□□□ -1.03
ATF3-211ENST00000613954 CD300EQ496F6 205 aaPredicted RBP8.6□□□□□ -1.03
ATF3-211ENST00000613954 TMEM78Q5T7P6 136 aa8.6□□□□□ -1.03
ATF3-211ENST00000613954 NRACQ8N912 160 aa8.6□□□□□ -1.03
ATF3-211ENST00000613954 SPTAN1Q13813 2472 aaKnown RBP8.6□□□□□ -1.03
ATF3-211ENST00000613954 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.59□□□□□ -1.03
ATF3-211ENST00000613954 C12orf74Q32Q52 190 aa8.59□□□□□ -1.03
ATF3-211ENST00000613954 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.59□□□□□ -1.03
ATF3-211ENST00000613954 ZNF502Q8TBZ5 544 aa8.59□□□□□ -1.03
ATF3-211ENST00000613954 MRAP2Q96G30 205 aa8.59□□□□□ -1.03
ATF3-211ENST00000613954 PRAC2D3DTV9 90 aa8.59□□□□□ -1.03
ATF3-211ENST00000613954 H7C1H1 209 aa8.59□□□□□ -1.03
ATF3-211ENST00000613954 K7EMI3 77 aa8.59□□□□□ -1.03
ATF3-211ENST00000613954 PPIFP30405 207 aaKnown RBP8.59□□□□□ -1.03
ATF3-211ENST00000613954 KLK9Q2XQG4 91 aa8.59□□□□□ -1.03
ATF3-211ENST00000613954 FAM110DQ8TAY7 271 aaPredicted RBP8.59□□□□□ -1.03
ATF3-211ENST00000613954 HIST1H4GQ99525 98 aa8.59□□□□□ -1.03
ATF3-211ENST00000613954 ZFAND3Q9H8U3 227 aa8.59□□□□□ -1.03
ATF3-211ENST00000613954 SPANXB1Q9NS25 103 aaPredicted RBP8.59□□□□□ -1.03
ATF3-211ENST00000613954 KLK9Q9UKQ9 250 aa8.59□□□□□ -1.03
ATF3-211ENST00000613954 COL12A1Q99715 3063 aa8.59□□□□□ -1.03
ATF3-211ENST00000613954 F8VRH5 84 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 SLC25A16P16260 332 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 ORMDL2Q53FV1 153 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 AGPAT4-IT1Q9H0P7 198 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 AKAP6Q13023 2319 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 IGHV7-81A0A0B4J1V7 117 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 IGHV7-4-1A0A0J9YVY3 117 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 A0A1B0GWB2 263 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 OR11H12B2RN74 326 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 NPFFO15130 113 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 TRGV3P03979 118 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 SAA4P35542 130 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 SPANXN1Q5VSR9 72 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 MAPKAPK5-AS1Q8N8E1 139 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 OR11H1Q8NG94 326 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 OR11H2Q8NH07 326 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 AJUBAQ96IF1 538 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 SPATA25Q9BR10 227 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 UFC1Q9Y3C8 167 aa8.58□□□□□ -1.04
ATF3-211ENST00000613954 CENPVL3A0A0U1RRI6 287 aa8.57□□□□□ -1.04
ATF3-211ENST00000613954 GAGE12HA6NDE8 117 aa8.57□□□□□ -1.04
ATF3-211ENST00000613954 AZU1P20160 251 aa8.57□□□□□ -1.04
ATF3-211ENST00000613954 RRN3P1Q2M238 152 aa8.57□□□□□ -1.04
ATF3-211ENST00000613954 C15orf32Q32M92 178 aa8.57□□□□□ -1.04
ATF3-211ENST00000613954 GAGE13Q4V321 117 aa8.57□□□□□ -1.04
ATF3-211ENST00000613954 C9orf47Q6ZRZ4 202 aa8.57□□□□□ -1.04
ATF3-211ENST00000613954 RNF182Q8N6D2 247 aa8.57□□□□□ -1.04
ATF3-211ENST00000613954 TRBV7-3A0A075B6L6 115 aa8.56□□□□□ -1.04
ATF3-211ENST00000613954 MYMXA0A1B0GTQ4 84 aa8.56□□□□□ -1.04
ATF3-211ENST00000613954 ATP6V0BQ99437 205 aa8.56□□□□□ -1.04
ATF3-211ENST00000613954 SMIM2Q9BVW6 85 aa8.56□□□□□ -1.04
ATF3-211ENST00000613954 C11orf21Q9P2W6 132 aa8.56□□□□□ -1.04
ATF3-211ENST00000613954 LENEPQ9Y5L5 61 aa8.56□□□□□ -1.04
ATF3-211ENST00000613954 CLEC3BP05452 202 aa8.56□□□□□ -1.04
ATF3-211ENST00000613954 MSMBP08118 114 aa8.56□□□□□ -1.04
ATF3-211ENST00000613954 WFDC2Q14508 124 aa8.56□□□□□ -1.04
ATF3-211ENST00000613954 METTL26Q96S19 204 aa8.56□□□□□ -1.04
ATF3-211ENST00000613954 BEX4Q9NWD9 120 aaPredicted RBP8.56□□□□□ -1.04
ATF3-211ENST00000613954 TSSC4Q9Y5U2 329 aaPredicted RBP8.56□□□□□ -1.04
ATF3-211ENST00000613954 IGHV1-69DA0A0B4J2H0 117 aa8.55□□□□□ -1.04
ATF3-211ENST00000613954 B4DSR2 109 aa8.55□□□□□ -1.04
ATF3-211ENST00000613954 H3BMG7 143 aa8.55□□□□□ -1.04
ATF3-211ENST00000613954 J3QKU1 62 aa8.55□□□□□ -1.04
ATF3-211ENST00000613954 IGHV1-69P01742 117 aa8.55□□□□□ -1.04
ATF3-211ENST00000613954 PLA2G2AP14555 144 aa8.55□□□□□ -1.04
ATF3-211ENST00000613954 TOMM6Q96B49 74 aa8.55□□□□□ -1.04
ATF3-211ENST00000613954 C20orf78Q9BR46 151 aa8.55□□□□□ -1.04
ATF3-211ENST00000613954 GTSF1LQ9H1H1 148 aa8.55□□□□□ -1.04
ATF3-211ENST00000613954 KMT2BQ9UMN6 2715 aaPredicted RBP8.55□□□□□ -1.04
ATF3-211ENST00000613954 UTP20O75691 2785 aaKnown RBP8.55□□□□□ -1.04
ATF3-211ENST00000613954 IGHV3OR16-8A0A075B7F1 116 aa8.54□□□□□ -1.04
ATF3-211ENST00000613954 TRAV26-2A0A0B4J265 109 aa8.54□□□□□ -1.04
ATF3-211ENST00000613954 IGHV3-35A0A0C4DH35 117 aa8.54□□□□□ -1.04
ATF3-211ENST00000613954 KRTAP10-9P60411 292 aa8.54□□□□□ -1.04
ATF3-211ENST00000613954 Q8N9W7 124 aa8.54□□□□□ -1.04
ATF3-211ENST00000613954 EEF1AKMT3Q96AZ1 226 aa8.54□□□□□ -1.04
ATF3-211ENST00000613954 SCGB3A1Q96QR1 104 aa8.54□□□□□ -1.04
ATF3-211ENST00000613954 TACC2O95359 2948 aa8.54□□□□□ -1.04
ATF3-211ENST00000613954 TRBV7-1A0A0A6YYK4 115 aa8.54□□□□□ -1.04
ATF3-211ENST00000613954 TRAV8-2A0A0B4J237 113 aa8.54□□□□□ -1.04
ATF3-211ENST00000613954 CLPSL1A2RUU4 121 aa8.54□□□□□ -1.04
ATF3-211ENST00000613954 HOXA3O43365 443 aaPredicted RBP8.54□□□□□ -1.04
ATF3-211ENST00000613954 Q5PR19 223 aa8.54□□□□□ -1.04
ATF3-211ENST00000613954 C8orf86Q6ZUL3 223 aa8.54□□□□□ -1.04
ATF3-211ENST00000613954 WFDC12Q8WWY7 111 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms