RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 CCL18P55774 89 aa15.79■□□□□ 0.12
CTDP1-208ENST00000613122 HEATR5AQ86XA9 2040 aa15.79■□□□□ 0.12
CTDP1-208ENST00000613122 NPYP01303 97 aa15.79■□□□□ 0.12
CTDP1-208ENST00000613122 LTAP01374 205 aa15.79■□□□□ 0.12
CTDP1-208ENST00000613122 C9JAW5 83 aa15.79■□□□□ 0.12
CTDP1-208ENST00000613122 OCIAD2Q56VL3 154 aa15.79■□□□□ 0.12
CTDP1-208ENST00000613122 RNF152Q8N8N0 203 aa15.79■□□□□ 0.12
CTDP1-208ENST00000613122 PKIGQ9Y2B9 76 aa15.79■□□□□ 0.12
CTDP1-208ENST00000613122 XCL1P47992 114 aa15.79■□□□□ 0.12
CTDP1-208ENST00000613122 C1orf43Q9BWL3 253 aa15.79■□□□□ 0.12
CTDP1-208ENST00000613122 ICOSQ9Y6W8 199 aa15.79■□□□□ 0.12
CTDP1-208ENST00000613122 C5orf56Q8N8D9 126 aa15.79■□□□□ 0.12
CTDP1-208ENST00000613122 SIGLEC8Q9NYZ4 499 aa15.79■□□□□ 0.12
CTDP1-208ENST00000613122 ATP5G1P05496 136 aa15.78■□□□□ 0.12
CTDP1-208ENST00000613122 GAGE2BQ13066 116 aa15.78■□□□□ 0.12
CTDP1-208ENST00000613122 C9JQL5 133 aa15.78■□□□□ 0.12
CTDP1-208ENST00000613122 KRTAP27-1Q3LI81 207 aa15.78■□□□□ 0.12
CTDP1-208ENST00000613122 UBE2WQ96B02 151 aa15.78■□□□□ 0.12
CTDP1-208ENST00000613122 SPINK8P0C7L1 97 aa15.78■□□□□ 0.12
CTDP1-208ENST00000613122 RBMY1FQ15415 496 aaKnown RBP15.78■□□□□ 0.12
CTDP1-208ENST00000613122 TAL2Q16559 108 aa15.78■□□□□ 0.12
CTDP1-208ENST00000613122 CFHR4Q92496 578 aa15.78■□□□□ 0.12
CTDP1-208ENST00000613122 RNASE13Q5GAN3 156 aaKnown RBP15.78■□□□□ 0.12
CTDP1-208ENST00000613122 SEM1Q6ZVN7 128 aa15.78■□□□□ 0.12
CTDP1-208ENST00000613122 SPRY4Q9C004 299 aa15.78■□□□□ 0.12
CTDP1-208ENST00000613122 FGF23Q9GZV9 251 aaPredicted RBP15.77■□□□□ 0.12
CTDP1-208ENST00000613122 IGHV4OR15-8A0A075B7B6 117 aa15.77■□□□□ 0.11
CTDP1-208ENST00000613122 A0A087WW49 117 aa15.77■□□□□ 0.11
CTDP1-208ENST00000613122 MRPL23Q16540 153 aaKnown RBP15.77■□□□□ 0.11
CTDP1-208ENST00000613122 TRAV25A0A0B4J276 109 aa15.77■□□□□ 0.11
CTDP1-208ENST00000613122 SOCS3O14543 225 aa15.77■□□□□ 0.11
CTDP1-208ENST00000613122 C11orf52Q96A22 123 aa15.77■□□□□ 0.11
CTDP1-208ENST00000613122 MYCNOSP40205 109 aa15.76■□□□□ 0.11
CTDP1-208ENST00000613122 EDA2RQ9HAV5 297 aa15.76■□□□□ 0.11
CTDP1-208ENST00000613122 IGLV11-55A0A075B6I3 123 aa15.76■□□□□ 0.11
CTDP1-208ENST00000613122 Q8N9W7 124 aa15.76■□□□□ 0.11
CTDP1-208ENST00000613122 PCNX1Q96RV3 2341 aa15.75■□□□□ 0.11
CTDP1-208ENST00000613122 I3L2K1 104 aa15.75■□□□□ 0.11
CTDP1-208ENST00000613122 ZNF493Q6ZR52 646 aa15.75■□□□□ 0.11
CTDP1-208ENST00000613122 RITA1Q96K30 269 aa15.75■□□□□ 0.11
CTDP1-208ENST00000613122 CLPSL1A2RUU4 121 aa15.75■□□□□ 0.11
CTDP1-208ENST00000613122 DOCK10Q96BY6 2186 aa15.75■□□□□ 0.11
CTDP1-208ENST00000613122 ZFP36P26651 326 aaKnown RBP15.75■□□□□ 0.11
CTDP1-208ENST00000613122 SUMO4Q6EEV6 95 aa15.75■□□□□ 0.11
CTDP1-208ENST00000613122 GYPEP15421 78 aa15.74■□□□□ 0.11
CTDP1-208ENST00000613122 PRORYQ9H606 182 aa15.74■□□□□ 0.11
CTDP1-208ENST00000613122 SH2D6Q7Z4S9 175 aa15.74■□□□□ 0.11
CTDP1-208ENST00000613122 ZFHX2Q9C0A1 2572 aaPredicted RBP15.74■□□□□ 0.11
CTDP1-208ENST00000613122 EGR2P11161 476 aaPredicted RBP15.74■□□□□ 0.11
CTDP1-208ENST00000613122 GTF3C1Q12789 2109 aa15.74■□□□□ 0.11
CTDP1-208ENST00000613122 WIPF3A6NGB9 483 aa15.73■□□□□ 0.11
CTDP1-208ENST00000613122 ZGRF1Q86YA3 2104 aa15.73■□□□□ 0.11
CTDP1-208ENST00000613122 K7EIM0 57 aa15.73■□□□□ 0.11
CTDP1-208ENST00000613122 CD5LO43866 347 aa15.73■□□□□ 0.11
CTDP1-208ENST00000613122 FBXL19-AS1Q494R0 122 aa15.73■□□□□ 0.11
CTDP1-208ENST00000613122 ZFAND6Q6FIF0 208 aa15.73■□□□□ 0.11
CTDP1-208ENST00000613122 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.73■□□□□ 0.11
CTDP1-208ENST00000613122 IGKV2-29A2NJV5 120 aaPredicted RBP15.73■□□□□ 0.11
CTDP1-208ENST00000613122 ASPHD1Q5U4P2 390 aa15.73■□□□□ 0.11
CTDP1-208ENST00000613122 MRPL35Q9NZE8 188 aaKnown RBP15.73■□□□□ 0.11
CTDP1-208ENST00000613122 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.73■□□□□ 0.113e-7■■■■□ 21.1
CTDP1-208ENST00000613122 TRAV13-2A0A0B4J235 113 aa15.72■□□□□ 0.11
CTDP1-208ENST00000613122 CRLF1O75462 422 aa15.72■□□□□ 0.11
CTDP1-208ENST00000613122 PYY3Q5JQD4 70 aa15.72■□□□□ 0.11
CTDP1-208ENST00000613122 DOCK9Q9BZ29 2069 aa15.72■□□□□ 0.11
CTDP1-208ENST00000613122 F8VRH5 84 aa15.72■□□□□ 0.11
CTDP1-208ENST00000613122 LGALS9BQ3B8N2 356 aa15.72■□□□□ 0.11
CTDP1-208ENST00000613122 LGALS9CQ6DKI2 356 aa15.72■□□□□ 0.11
CTDP1-208ENST00000613122 ADAMTSL5Q6ZMM2 481 aa15.72■□□□□ 0.11
CTDP1-208ENST00000613122 Q8NA96 180 aa15.72■□□□□ 0.11
CTDP1-208ENST00000613122 PCNX2A6NKB5 2137 aa15.72■□□□□ 0.11
CTDP1-208ENST00000613122 C16orf54Q6UWD8 224 aa15.72■□□□□ 0.11
CTDP1-208ENST00000613122 ATP6V0E2Q8NHE4 81 aa15.72■□□□□ 0.11
CTDP1-208ENST00000613122 CTSGP08311 255 aa15.71■□□□□ 0.11
CTDP1-208ENST00000613122 K7EQD1 137 aa15.71■□□□□ 0.11
CTDP1-208ENST00000613122 INAFM2P0DMQ5 153 aa15.71■□□□□ 0.11
CTDP1-208ENST00000613122 C4orf3Q8WVX3 66 aa15.71■□□□□ 0.11
CTDP1-208ENST00000613122 C2orf70A6NJV1 201 aa15.71■□□□□ 0.1
CTDP1-208ENST00000613122 MALRD1Q5VYJ5 2156 aa15.71■□□□□ 0.1
CTDP1-208ENST00000613122 F8W735 103 aaPredicted RBP15.7■□□□□ 0.1
CTDP1-208ENST00000613122 MUC6Q6W4X9 2439 aa15.7■□□□□ 0.1
CTDP1-208ENST00000613122 J3QQQ9 107 aa15.7■□□□□ 0.1
CTDP1-208ENST00000613122 RPL18AQ02543 176 aaKnown RBP15.69■□□□□ 0.1
CTDP1-208ENST00000613122 TMEM89A2RUT3 159 aa15.69■□□□□ 0.1
CTDP1-208ENST00000613122 Q8N7P7 452 aa15.69■□□□□ 0.1
CTDP1-208ENST00000613122 BUB3O43684 328 aa15.69■□□□□ 0.1
CTDP1-208ENST00000613122 IGHV3-30P01768 117 aa15.69■□□□□ 0.1
CTDP1-208ENST00000613122 IGHV3-33P01772 117 aa15.69■□□□□ 0.1
CTDP1-208ENST00000613122 IGHV3-30-3P0DP02 117 aa15.69■□□□□ 0.1
CTDP1-208ENST00000613122 IGHV3-30-5P0DP03 117 aa15.69■□□□□ 0.1
CTDP1-208ENST00000613122 SMAD5-AS1Q9Y6J3 95 aa15.69■□□□□ 0.1
CTDP1-208ENST00000613122 ZNF664Q8N3J9 261 aa15.68■□□□□ 0.1
CTDP1-208ENST00000613122 KLK5Q9Y337 293 aaPredicted RBP15.67■□□□□ 0.1
CTDP1-208ENST00000613122 CITED2Q99967 270 aaPredicted RBP15.67■□□□□ 0.1
CTDP1-208ENST00000613122 K7EMT4 169 aa15.66■□□□□ 0.1
CTDP1-208ENST00000613122 MRPL52Q86TS9 123 aaKnown RBP15.66■□□□□ 0.1
CTDP1-208ENST00000613122 SIRPDQ9H106 197 aa15.66■□□□□ 0.1
CTDP1-208ENST00000613122 K7EMI3 77 aa15.66■□□□□ 0.1
CTDP1-208ENST00000613122 SLC25A29Q8N8R3 303 aa15.66■□□□□ 0.1
CTDP1-208ENST00000613122 TRBV20-1A0A075B6N2 111 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms