RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 Q9H3A6 140 aa8.53□□□□□ -1.04
FAM3A-221ENST00000612856 MRPL16Q9NX20 251 aaKnown RBP8.53□□□□□ -1.04
FAM3A-221ENST00000612856 EPDR1Q9UM22 224 aa8.53□□□□□ -1.04
FAM3A-221ENST00000612856 LINC01548A6NM66 108 aa8.53□□□□□ -1.04
FAM3A-221ENST00000612856 RNF182Q8N6D2 247 aa8.53□□□□□ -1.04
FAM3A-221ENST00000612856 SVIPQ8NHG7 77 aa8.53□□□□□ -1.04
FAM3A-221ENST00000612856 IFI27L1Q96BM0 104 aa8.53□□□□□ -1.04
FAM3A-221ENST00000612856 FOXC2Q99958 501 aa8.53□□□□□ -1.04
FAM3A-221ENST00000612856 KAAG1Q9UBP8 84 aa8.53□□□□□ -1.04
FAM3A-221ENST00000612856 IGHV3-73A0A0B4J1V6 119 aa8.53□□□□□ -1.04
FAM3A-221ENST00000612856 D6R8Y8 96 aa8.53□□□□□ -1.04
FAM3A-221ENST00000612856 IGHV3-53P01767 116 aa8.53□□□□□ -1.04
FAM3A-221ENST00000612856 ARMS2P0C7Q2 107 aa8.53□□□□□ -1.04
FAM3A-221ENST00000612856 RNASE2P10153 161 aaKnown RBP8.53□□□□□ -1.04
FAM3A-221ENST00000612856 OR5AN1Q8NGI8 311 aa8.53□□□□□ -1.04
FAM3A-221ENST00000612856 VGLL1Q99990 258 aa8.53□□□□□ -1.04
FAM3A-221ENST00000612856 PROP1O75360 226 aa8.52□□□□□ -1.05
FAM3A-221ENST00000612856 FXYD2P54710 66 aa8.52□□□□□ -1.05
FAM3A-221ENST00000612856 C1orf229Q6ZS94 237 aaPredicted RBP8.52□□□□□ -1.05
FAM3A-221ENST00000612856 MRAP2Q96G30 205 aa8.52□□□□□ -1.05
FAM3A-221ENST00000612856 BRWD1-AS2P59051 145 aa8.52□□□□□ -1.05
FAM3A-221ENST00000612856 DEFB131AP59861 70 aa8.52□□□□□ -1.05
FAM3A-221ENST00000612856 ASH1LQ9NR48 2969 aaKnown RBP8.52□□□□□ -1.05
FAM3A-221ENST00000612856 TRGV2A0A075B6R0 118 aa8.51□□□□□ -1.05
FAM3A-221ENST00000612856 OR9G4Q8NGQ1 327 aa8.51□□□□□ -1.05
FAM3A-221ENST00000612856 XCL2Q9UBD3 114 aa8.51□□□□□ -1.05
FAM3A-221ENST00000612856 TTC32Q5I0X7 151 aa8.51□□□□□ -1.05
FAM3A-221ENST00000612856 DKK2Q9UBU2 259 aa8.51□□□□□ -1.05
FAM3A-221ENST00000612856 NDUFA3O95167 84 aa8.51□□□□□ -1.05
FAM3A-221ENST00000612856 EVI2AP22794 236 aa8.51□□□□□ -1.05
FAM3A-221ENST00000612856 GATA3P23771 443 aa8.51□□□□□ -1.05
FAM3A-221ENST00000612856 TTC9CQ8N5M4 171 aa8.51□□□□□ -1.05
FAM3A-221ENST00000612856 C20orf78Q9BR46 151 aa8.51□□□□□ -1.05
FAM3A-221ENST00000612856 CYSLTR1Q9Y271 337 aa8.51□□□□□ -1.05
FAM3A-221ENST00000612856 E7EUB6 86 aa8.5□□□□□ -1.05
FAM3A-221ENST00000612856 CD7P09564 240 aa8.5□□□□□ -1.05
FAM3A-221ENST00000612856 ZNF56Q15929 161 aa8.5□□□□□ -1.05
FAM3A-221ENST00000612856 Q1RN00 199 aa8.5□□□□□ -1.05
FAM3A-221ENST00000612856 DYNAPQ8N1N2 210 aa8.5□□□□□ -1.05
FAM3A-221ENST00000612856 LINC00477Q96M19 166 aa8.5□□□□□ -1.05
FAM3A-221ENST00000612856 CHAC1Q9BUX1 264 aa8.5□□□□□ -1.05
FAM3A-221ENST00000612856 ZNF747Q9BV97 191 aa8.5□□□□□ -1.05
FAM3A-221ENST00000612856 PEMTQ9UBM1 199 aa8.5□□□□□ -1.05
FAM3A-221ENST00000612856 ATP5L2Q7Z4Y8 100 aa8.5□□□□□ -1.05
FAM3A-221ENST00000612856 AMN1Q8IY45 258 aa8.5□□□□□ -1.05
FAM3A-221ENST00000612856 SMIM20Q8N5G0 67 aa8.5□□□□□ -1.05
FAM3A-221ENST00000612856 ZNF502Q8TBZ5 544 aa8.5□□□□□ -1.05
FAM3A-221ENST00000612856 SPRY2O43597 315 aa8.5□□□□□ -1.05
FAM3A-221ENST00000612856 DEFB1P60022 68 aa8.5□□□□□ -1.05
FAM3A-221ENST00000612856 SSBP2P81877 361 aaPredicted RBP8.5□□□□□ -1.05
FAM3A-221ENST00000612856 RASL11AQ6T310 242 aa8.5□□□□□ -1.05
FAM3A-221ENST00000612856 C10orf99Q6UWK7 81 aa8.5□□□□□ -1.05
FAM3A-221ENST00000612856 TRBV20-1A0A075B6N2 111 aa8.49□□□□□ -1.05
FAM3A-221ENST00000612856 OOSP1A8MZH6 123 aa8.49□□□□□ -1.05
FAM3A-221ENST00000612856 C2orf83Q53S99 150 aa8.49□□□□□ -1.05
FAM3A-221ENST00000612856 ZC2HC1BQ5TFG8 222 aa8.49□□□□□ -1.05
FAM3A-221ENST00000612856 SPAG8Q99932 426 aaPredicted RBP8.49□□□□□ -1.05
FAM3A-221ENST00000612856 TRAV12-3A0A0B4J271 114 aa8.49□□□□□ -1.05
FAM3A-221ENST00000612856 INSL3P51460 131 aa8.49□□□□□ -1.05
FAM3A-221ENST00000612856 IGLV2-8P01709 118 aa8.49□□□□□ -1.05
FAM3A-221ENST00000612856 HBDP02042 147 aa8.49□□□□□ -1.05
FAM3A-221ENST00000612856 CFHR3Q02985 330 aa8.49□□□□□ -1.05
FAM3A-221ENST00000612856 KLF5Q13887 457 aaPredicted RBP8.49□□□□□ -1.05
FAM3A-221ENST00000612856 TCTEX1D4Q5JR98 221 aa8.49□□□□□ -1.05
FAM3A-221ENST00000612856 SIGLEC15Q6ZMC9 328 aa8.49□□□□□ -1.05
FAM3A-221ENST00000612856 VPREB3Q9UKI3 123 aa8.49□□□□□ -1.05
FAM3A-221ENST00000612856 ITPR1Q14643 2758 aa8.49□□□□□ -1.05
FAM3A-221ENST00000612856 F6UB75 175 aa8.48□□□□□ -1.05
FAM3A-221ENST00000612856 LTAP01374 205 aa8.48□□□□□ -1.05
FAM3A-221ENST00000612856 DEFB130BP0DP73 79 aa8.48□□□□□ -1.05
FAM3A-221ENST00000612856 DEFB130AP0DP74 79 aa8.48□□□□□ -1.05
FAM3A-221ENST00000612856 C2orf91Q6ZV80 131 aa8.48□□□□□ -1.05
FAM3A-221ENST00000612856 LEPP41159 167 aa8.48□□□□□ -1.05
FAM3A-221ENST00000612856 SLURP1P55000 103 aa8.48□□□□□ -1.05
FAM3A-221ENST00000612856 LOXL1Q08397 574 aaPredicted RBP8.48□□□□□ -1.05
FAM3A-221ENST00000612856 ZNF833PQ6ZTB9 187 aa8.48□□□□□ -1.05
FAM3A-221ENST00000612856 TMEM213A2RRL7 107 aa8.48□□□□□ -1.05
FAM3A-221ENST00000612856 TMEM262E9PQX1 116 aa8.48□□□□□ -1.05
FAM3A-221ENST00000612856 ERCC8Q13216 396 aa8.48□□□□□ -1.05
FAM3A-221ENST00000612856 ORMDL3Q8N138 153 aa8.48□□□□□ -1.05
FAM3A-221ENST00000612856 MRPL32Q9BYC8 188 aaKnown RBP8.48□□□□□ -1.05
FAM3A-221ENST00000612856 TRAV12-2A0A075B6T6 113 aa8.47□□□□□ -1.05
FAM3A-221ENST00000612856 IGKV1OR2-108A0A075B7D4 117 aa8.47□□□□□ -1.05
FAM3A-221ENST00000612856 KNCNA6PVL3 124 aa8.47□□□□□ -1.05
FAM3A-221ENST00000612856 GTSF1Q8WW33 167 aa8.47□□□□□ -1.05
FAM3A-221ENST00000612856 A0A1B0GW15 77 aa8.47□□□□□ -1.05
FAM3A-221ENST00000612856 HLA-DMBP28068 263 aa8.47□□□□□ -1.05
FAM3A-221ENST00000612856 PRR20EP86478 221 aa8.47□□□□□ -1.05
FAM3A-221ENST00000612856 PRR20CP86479 221 aa8.47□□□□□ -1.05
FAM3A-221ENST00000612856 PRR20DP86480 221 aa8.47□□□□□ -1.05
FAM3A-221ENST00000612856 PRR20BP86481 221 aa8.47□□□□□ -1.05
FAM3A-221ENST00000612856 PRR20AP86496 221 aa8.47□□□□□ -1.05
FAM3A-221ENST00000612856 RNF183Q96D59 192 aa8.47□□□□□ -1.05
FAM3A-221ENST00000612856 MYOZ3Q8TDC0 251 aa8.47□□□□□ -1.05
FAM3A-221ENST00000612856 ZNF503Q96F45 646 aa8.47□□□□□ -1.05
FAM3A-221ENST00000612856 AVPP01185 164 aa8.46□□□□□ -1.05
FAM3A-221ENST00000612856 LINC00322Q6ZN03 302 aaPredicted RBP8.46□□□□□ -1.05
FAM3A-221ENST00000612856 TRAV8-2A0A0B4J237 113 aa8.46□□□□□ -1.05
FAM3A-221ENST00000612856 VWC2LB2RUY7 222 aa8.46□□□□□ -1.05
FAM3A-221ENST00000612856 SPINK13Q1W4C9 94 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms