RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 PPT1P50897 306 aa12.67□□□□□ -0.38
SEMA3B-211ENST00000612509 ZNF80P51504 273 aaPredicted RBP12.67□□□□□ -0.38
SEMA3B-211ENST00000612509 LGALS9BQ3B8N2 356 aa12.67□□□□□ -0.38
SEMA3B-211ENST00000612509 UBE2DNLQ8IWF7 75 aa12.67□□□□□ -0.38
SEMA3B-211ENST00000612509 POM121L12Q8N7R1 296 aa12.67□□□□□ -0.38
SEMA3B-211ENST00000612509 EPPK1P58107 5090 aaKnown RBP12.66□□□□□ -0.38
SEMA3B-211ENST00000612509 TYMSP04818 313 aa12.66□□□□□ -0.38
SEMA3B-211ENST00000612509 OR5I1Q13606 314 aa12.66□□□□□ -0.38
SEMA3B-211ENST00000612509 SMUG1Q53HV7 270 aa12.66□□□□□ -0.38
SEMA3B-211ENST00000612509 SAPCD1Q5SSQ6 148 aa12.66□□□□□ -0.38
SEMA3B-211ENST00000612509 CST9LP1Q5W188 147 aa12.66□□□□□ -0.38
SEMA3B-211ENST00000612509 TCEAL7Q9BRU2 100 aa12.66□□□□□ -0.38
SEMA3B-211ENST00000612509 SDF2L1Q9HCN8 221 aa12.66□□□□□ -0.38
SEMA3B-211ENST00000612509 TRAV26-1A0A087WT03 109 aa12.65□□□□□ -0.38
SEMA3B-211ENST00000612509 NUDT3O95989 172 aa12.65□□□□□ -0.38
SEMA3B-211ENST00000612509 PFN1P07737 140 aaKnown RBP12.65□□□□□ -0.38
SEMA3B-211ENST00000612509 H2AFB1P0C5Y9 115 aa12.65□□□□□ -0.38
SEMA3B-211ENST00000612509 EIF5AL1Q6IS14 154 aaKnown RBP12.65□□□□□ -0.38
SEMA3B-211ENST00000612509 MUC4Q99102 2169 aa12.64□□□□□ -0.39
SEMA3B-211ENST00000612509 IGHV3-16A0A0C4DH30 117 aa12.64□□□□□ -0.39
SEMA3B-211ENST00000612509 PAGE4O60829 102 aa12.64□□□□□ -0.39
SEMA3B-211ENST00000612509 SLC51BQ86UW2 128 aa12.64□□□□□ -0.39
SEMA3B-211ENST00000612509 C9orf62Q8N4C0 152 aa12.64□□□□□ -0.39
SEMA3B-211ENST00000612509 KCNS1Q96KK3 526 aa12.64□□□□□ -0.39
SEMA3B-211ENST00000612509 SPXQ9BT56 116 aa12.64□□□□□ -0.39
SEMA3B-211ENST00000612509 DNAH10Q8IVF4 4471 aa12.63□□□□□ -0.39
SEMA3B-211ENST00000612509 A0A0J9YY99 117 aa12.63□□□□□ -0.39
SEMA3B-211ENST00000612509 GNRH2O43555 120 aa12.63□□□□□ -0.39
SEMA3B-211ENST00000612509 RAB5CP51148 216 aa12.63□□□□□ -0.39
SEMA3B-211ENST00000612509 C11orf21Q9P2W6 132 aa12.63□□□□□ -0.39
SEMA3B-211ENST00000612509 NACAE9PAV3 2078 aa12.63□□□□□ -0.39
SEMA3B-211ENST00000612509 IGHV3-53P01767 116 aa12.62□□□□□ -0.39
SEMA3B-211ENST00000612509 AKR1C3P42330 323 aa12.62□□□□□ -0.39
SEMA3B-211ENST00000612509 UBE2G1P62253 170 aa12.62□□□□□ -0.39
SEMA3B-211ENST00000612509 RNF212Q495C1 297 aa12.62□□□□□ -0.39
SEMA3B-211ENST00000612509 FMC1Q96HJ9 113 aa12.62□□□□□ -0.39
SEMA3B-211ENST00000612509 A0A1B0GVG6 124 aa12.61□□□□□ -0.39
SEMA3B-211ENST00000612509 SULT1A2P50226 295 aa12.61□□□□□ -0.39
SEMA3B-211ENST00000612509 RASL10AQ92737 203 aa12.61□□□□□ -0.39
SEMA3B-211ENST00000612509 TRBV6-1A0A0K0K1D8 114 aa12.6□□□□□ -0.39
SEMA3B-211ENST00000612509 H3BNG1 76 aa12.6□□□□□ -0.39
SEMA3B-211ENST00000612509 TRAV1-1A0A0B4J248 108 aa12.59□□□□□ -0.39
SEMA3B-211ENST00000612509 SCO2A0A1W2PP80 73 aa12.59□□□□□ -0.39
SEMA3B-211ENST00000612509 M0R2P5 195 aa12.59□□□□□ -0.39
SEMA3B-211ENST00000612509 LTAP01374 205 aa12.59□□□□□ -0.39
SEMA3B-211ENST00000612509 ZC2HC1AQ96GY0 325 aa12.59□□□□□ -0.39
SEMA3B-211ENST00000612509 VSIG2Q96IQ7 327 aa12.59□□□□□ -0.39
SEMA3B-211ENST00000612509 MANBALQ9NQG1 85 aa12.59□□□□□ -0.39
SEMA3B-211ENST00000612509 ZFP30Q9Y2G7 519 aa12.59□□□□□ -0.39
SEMA3B-211ENST00000612509 FAM3BP58499 235 aaPredicted RBP12.58□□□□□ -0.4
SEMA3B-211ENST00000612509 COX8CQ7Z4L0 72 aa12.58□□□□□ -0.4
SEMA3B-211ENST00000612509 GNG13Q9P2W3 67 aa12.58□□□□□ -0.4
SEMA3B-211ENST00000612509 BIRC6Q9NR09 4857 aa12.57□□□□□ -0.4
SEMA3B-211ENST00000612509 IGKV3D-20A0A0C4DH25 116 aa12.57□□□□□ -0.4
SEMA3B-211ENST00000612509 SFTA3P0C7M3 94 aa12.57□□□□□ -0.4
SEMA3B-211ENST00000612509 CCL18P55774 89 aa12.57□□□□□ -0.4
SEMA3B-211ENST00000612509 CCL20P78556 96 aa12.57□□□□□ -0.4
SEMA3B-211ENST00000612509 C9orf85Q96MD7 179 aa12.57□□□□□ -0.4
SEMA3B-211ENST00000612509 IGLV2-18A0A075B6J9 118 aa12.56□□□□□ -0.4
SEMA3B-211ENST00000612509 TRAV4A0A0B4J268 109 aa12.56□□□□□ -0.4
SEMA3B-211ENST00000612509 FABP5P3A8MUU1 101 aa12.56□□□□□ -0.4
SEMA3B-211ENST00000612509 TEX46H3BTG2 121 aa12.56□□□□□ -0.4
SEMA3B-211ENST00000612509 FHL2Q14192 279 aa12.56□□□□□ -0.4
SEMA3B-211ENST00000612509 ZNF479Q96JC4 524 aa12.56□□□□□ -0.4
SEMA3B-211ENST00000612509 PRO0255Q9UI72 69 aa12.56□□□□□ -0.4
SEMA3B-211ENST00000612509 LINC00588Q9Y4M8 146 aa12.56□□□□□ -0.4
SEMA3B-211ENST00000612509 PAX4O43316 350 aa12.55□□□□□ -0.4
SEMA3B-211ENST00000612509 SH2D1AO60880 128 aa12.55□□□□□ -0.4
SEMA3B-211ENST00000612509 S100A9P06702 114 aaKnown RBP12.55□□□□□ -0.4
SEMA3B-211ENST00000612509 RNASE3P12724 160 aaKnown RBP12.55□□□□□ -0.4
SEMA3B-211ENST00000612509 CRIP1P50238 77 aa12.55□□□□□ -0.4
SEMA3B-211ENST00000612509 FAM162BQ5T6X4 162 aa12.55□□□□□ -0.4
SEMA3B-211ENST00000612509 FRAS1Q86XX4 4008 aa12.54□□□□□ -0.4
SEMA3B-211ENST00000612509 A0A096LPF7 62 aa12.54□□□□□ -0.4
SEMA3B-211ENST00000612509 TRGV4A0A0C4DH28 118 aa12.54□□□□□ -0.4
SEMA3B-211ENST00000612509 M0R2N4 97 aa12.54□□□□□ -0.4
SEMA3B-211ENST00000612509 CRYBA4P53673 196 aa12.54□□□□□ -0.4
SEMA3B-211ENST00000612509 SLAQ13239 276 aa12.54□□□□□ -0.4
SEMA3B-211ENST00000612509 NHLRC2Q8NBF2 726 aa12.54□□□□□ -0.4
SEMA3B-211ENST00000612509 OR4C5Q8NGB2 326 aa12.54□□□□□ -0.4
SEMA3B-211ENST00000612509 DNAH2Q9P225 4427 aa12.54□□□□□ -0.4
SEMA3B-211ENST00000612509 B4DEV8 164 aa12.53□□□□□ -0.4
SEMA3B-211ENST00000612509 C9JCJ5 164 aa12.53□□□□□ -0.4
SEMA3B-211ENST00000612509 ORM1P02763 201 aa12.53□□□□□ -0.4
SEMA3B-211ENST00000612509 ASIPP42127 132 aa12.53□□□□□ -0.4
SEMA3B-211ENST00000612509 NKX2-5P52952 324 aaPredicted RBP12.53□□□□□ -0.4
SEMA3B-211ENST00000612509 ZNF674Q2M3X9 581 aa12.53□□□□□ -0.4
SEMA3B-211ENST00000612509 ZNRF2Q8NHG8 242 aa12.53□□□□□ -0.4
SEMA3B-211ENST00000612509 C11orf52Q96A22 123 aa12.53□□□□□ -0.4
SEMA3B-211ENST00000612509 HHLA3Q9XRX5 114 aa12.53□□□□□ -0.4
SEMA3B-211ENST00000612509 ICOSQ9Y6W8 199 aa12.53□□□□□ -0.4
SEMA3B-211ENST00000612509 M0R036 132 aa12.52□□□□□ -0.41
SEMA3B-211ENST00000612509 IFNA1P01562 189 aa12.52□□□□□ -0.41
SEMA3B-211ENST00000612509 S100A4P26447 101 aaKnown RBP12.52□□□□□ -0.41
SEMA3B-211ENST00000612509 ZNF876PQ49A33 203 aa12.52□□□□□ -0.41
SEMA3B-211ENST00000612509 ZNF506Q5JVG8 444 aa12.52□□□□□ -0.41
SEMA3B-211ENST00000612509 Q6ZR54 194 aa12.52□□□□□ -0.41
SEMA3B-211ENST00000612509 TXNDC17Q9BRA2 123 aa12.52□□□□□ -0.41
SEMA3B-211ENST00000612509 KRBOX1C9JBD0 128 aa12.51□□□□□ -0.41
SEMA3B-211ENST00000612509 H3BVH4 76 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms